Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G10430 LG-11 - View
Acer truncatum Atru.chr4.2530 chr4 - View
Arabidopsis lyrata AL6G30660 scaffold_6 + View
Avicennia marina MSTRG.4007 ScioBoG_102837_HRSCAF_103074 + View
Aquilegia oxysepala Aqoxy5G00515 CHR05 - View
Arabidopsis thaliana AT5G19210 P-loop containing nucleoside triphosphate hydrolases superfamily protein P-loop containing nucleoside triphosphate hydrolases superfamily protein%3B FUNCTIONS IN: helicase activity%2C nucleic acid binding%2C ATP binding%2C ATP-dependent helicase activity%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%3B BEST Arabidopsis thaliana protein match is: DEA(D/H)-box RNA helicase family protein (TAIR:AT3G58510.3)%3B Has 29066 Blast hits to 29063 proteins in 2795 species: Archae - 157%3B Bacteria - 14563%3B Metazoa - 4524%3B Fungi - 3653%3B Plants - 2123%3B Viruses - 4%3B Other Eukaryotes - 4042 (source: NCBI BLink). P-loop containing nucleoside triphosphate hydrolases superfamily protein%3B FUNCTIONS IN: helicase activity%2C ATP-dependent helicase activity%2C nucleic acid binding%2C ATP binding%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA helicase%2C DEAD-box type%2C Q motif (InterPro:IPR014014)%2C DNA/RNA helicase%2C DEAD/DEAH box type%2C N-terminal (InterPro:IPR011545)%2C DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%3B BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G12770.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr5 + View
Camellia sinensis var. sinensis CSS0010569 PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1 [Populus euphratica] Chr5 - View
Cannabis sativa CANSAT78G2216 NC_044376.1 + View
Coffea canephora Cc03_g03320 DEAD-box ATP-dependent RNA helicase 58, chloroplastic chr3 + View
Citrus clementina Ciclev10004897m.g scaffold_9 + View
Cardamine hirsuta CARHR193750 ATP-dependent RNA helicase Chr6 - View
Carya illinoinensis CiPaw.01G162000 PTHR24031//PTHR24031:SF228 - RNA HELICASE // PROTEIN Y54G11A.3 Chr01 + View
Citrullus lanatus ClCG05G005310 ATP-dependent RNA helicase CG_Chr05 - View
Capsella rubella Carub.0006s1755 PTHR24031:SF228 - PROTEIN Y54G11A.3 scaffold_6 + View
Davidia involucrata Dinv44497 GWHABJS00000014 - View
Durio zibethinus Duzib151G0916 NW_019167904.1 + View
Eucalyptus grandis Eucgr.H03567 Chr08 - View
Eutrema salsugineum Thhalv10013438m.g PTHR24031:SF228 - PROTEIN Y54G11A.3 scaffold_2 + View
Fragaria x ananassa FAN12G3450 KOG0330//KOG0331 - ATP-dependent RNA helicase // ATP-dependent RNA helicase Fvb4-3 - View
Fragaria x ananassa FAN17G2203 PTHR24031//PTHR24031:SF228 - RNA HELICASE // PROTEIN Y54G11A.3 Fvb4-2 + View
Fragaria x ananassa FAN22G0759 KOG0330//KOG0331 - ATP-dependent RNA helicase // ATP-dependent RNA helicase Fvb4-1 - View
Fragaria x ananassa FAN07G2291 PTHR24031//PTHR24031:SF228 - RNA HELICASE // PROTEIN Y54G11A.3 Fvb4-4 + View
Fragaria vesca FvH4_4g14870 PTHR24031:SF228 - PROTEIN Y54G11A.3 Fvb4 + View
Glycine max Glyma.17G015700 PTHR24031:SF228 - PROTEIN Y54G11A.3 Gm17 - View
Glycine max Glyma.07G258400 KOG0327//KOG0340 - Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases // ATP-dependent RNA helicase Gm07 + View
Lotus japonicus Lj4g0016275 PTHR24031//PTHR24031:SF228 - RNA HELICASE // PROTEIN Y54G11A.3 chr4 - View
Malus domestica MD13G1186000 P-loop containing nucleoside triphosphate hydrolases superfamily protein Chr13 + View
Malus domestica MD16G1186800 P-loop containing nucleoside triphosphate hydrolases superfamily protein Chr16 + View
Manihot esculenta Manes.03G182200 Chromosome03 - View
Nelumbo nucifera Nn1g02202 chr1 + View
Punica granatum PGR004G2730 NC_045131.1 + View
Prunus persica Prupe.1G153600 Pp01 + View
Papaver somniferum PSO832G0154 NC_039367.1 - View
Papaver somniferum PSO210G6087 NC_039359.1 - View
Quercus lobata QL06p003720 6 - View
Rhododendron simsii Rhsim04G0203900 chr04 + View
Solanum lycopersicum Solyc01g079800.4 DEAD-box ATP-dependent RNA helicase 58, chloroplastic (AHRD V3.3 *** A0A2G3AL49_CAPAN) SL4.0ch01 - View
Solanum pennellii Sopen01g031560 P-loop containing nucleoside triphosphate hydrolases superfamily protein | FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, nucleic acid binding, ATP binding | INVOLVED IN: biological_process unknown | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA helicase, DEAD-box type, Q motif , DNA/RNA helicase, DEAD/DEAH box type, N-terminal , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400008995 Chloroplast RNA helicase VDL isoform 1 ST4.03ch01 + View
Selenicereus undatus Hund12173 Scaffold_33679 - View
Theobroma cacao Thecc.04G225400 P-loop containing nucleoside triphosphate hydrolases superfamily protein Chromosome_4 + View
Vitis vinifera GSVIVG01017910001 chr5 + View