Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold23G10030 scaffold23 + View
SGA_v2.0_scaffold4G02050 scaffold4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G12900 LG-3 + View
Aethionema arabicum Aa31LG8G16470 LG-8 - View
Acer truncatum Atru.chr7.1624 chr7 + View
Actinidia chinensis Actinidia21774 Lachesis_group1 - View
Actinidia chinensis Actinidia29910 Lachesis_group25 + View
Actinidia chinensis Actinidia39708 Lachesis_group5 + View
Actinidia chinensis Actinidia25241 Lachesis_group18 + View
Arabidopsis lyrata AL8G32910 scaffold_8 + View
Arabidopsis lyrata AL3G48780 scaffold_3 + View
Arabidopsis lyrata AL7G26880 scaffold_7 + View
Avicennia marina MSTRG.26439 ScioBoG_52287_HRSCAF_52434 + View
Avicennia marina MSTRG.10547 ScioBoG_13798_HRSCAF_13862 - View
Avicennia marina MSTRG.9504 ScioBoG_12795_HRSCAF_12848 + View
Aquilegia oxysepala Aqoxy7G01168 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UDXZ3L K02218 - casein kinase 1 (CSNK1, CK1) arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.976DYS K02218 - casein kinase 1 (CSNK1, CK1) arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HE33X4 K02218 - casein kinase 1 (CSNK1, CK1) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT5G57015 casein kinase I-like 12 casein kinase I-like 12 (ckl12)%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: cytoplasm%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT4G26100 casein kinase 1 Encodes a member of the casein kinase 1 protein family that is expressed in punctate particles at the cell periphery suggesting possible plasmodesmatal localization. casein kinase 1 (CK1)%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: plasmodesma%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: casein kinase I-like 12 (TAIR:AT5G57015.1)%3B Has 62578 Blast hits to 62222 proteins in 2324 species: Archae - 33%3B Bacteria - 9966%3B Metazoa - 23829%3B Fungi - 6469%3B Plants - 10923%3B Viruses - 370%3B Other Eukaryotes - 10988 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT2G19470 casein kinase I-like 5 casein kinase I-like 5 (ckl5)%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein kinase%2C ATP binding site (InterPro:IPR017441)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%3B BEST Arabidopsis thaliana protein match is: casein kinase 1 (TAIR:AT4G26100.1)%3B Has 70101 Blast hits to 69707 proteins in 2404 species: Archae - 48%3B Bacteria - 11303%3B Metazoa - 26265%3B Fungi - 7230%3B Plants - 12439%3B Viruses - 411%3B Other Eukaryotes - 12405 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR0789G032 AmTr_v1.0_scaffold00036 - View
Brassica carinata BcaB01g04437 ChrB01 + View
Brassica carinata BcaB05g22310 ChrB05 + View
Brassica carinata BcaB03g16733 ChrB03 - View
Brassica napus A01p17370 A01 - View
Brassica napus C01p21850 C01 - View
Brassica napus A03p13040 A03 - View
Brassica rapa BraA03t10614Z A03 - View
Brassica rapa BraA10t43524Z A10 + View
Brassica rapa BraA01t01691Z A01 - View
Beta vulgaris EL10Ac8g19180 K02218 - casein kinase 1 (CSNK1, CK1) Chr8_EL10_PGA_scaffold4 - View
Camellia sinensis var. sinensis CSS0049748 PREDICTED: casein kinase I isoform delta-like [Nicotiana tomentosiformis] Chr14 - View
Cannabis sativa CANSAT56G0043 NC_044371.1 + View
Cicer arietinum L. Ca_13124_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_21288_v3 Ca_LG7_v3 + View
Cicer arietinum L. Ca_01216_v3 Ca_LG1_v3 + View
Cicer arietinum L. Ca_23339_v3 Ca_LG7_v3 + View
Corylus avellana Haze_25936 Similar to CKL1: Casein kinase 1-like protein 1 (Arabidopsis thaliana OX%3D3702) 8 + View
Corylus avellana Haze_18159 Similar to CKL12: Casein kinase 1-like protein 12 (Arabidopsis thaliana OX%3D3702) 7 - View
Coffea canephora Cc04_g01700 Casein kinase I isoform delta-like chr4 - View
Coffea canephora Cc06_g11600 Casein kinase I isoform delta-like chr6 + View
Citrus clementina Ciclev10025527m.g scaffold_7 + View
Citrus clementina Ciclev10008160m.g scaffold_1 + View
Carpinus fangiana Cfa017972 Cfa07 + View
Carpinus fangiana Cfa003059 Cfa01 - View
Cardamine hirsuta CARHR270760 Casein kinase 1-like protein 1 Chr8 + View
Cardamine hirsuta CARHR109910 casein kinase I-like 5 Chr3 - View
Carya illinoinensis CiPaw.04G148000 K02218 - casein kinase 1 (CSNK1, CK1) Chr04 - View
Carya illinoinensis CiPaw.03G212700 K02218 - casein kinase 1 (CSNK1, CK1) Chr03 - View
Citrullus lanatus ClCG11G001690 Casein kinase family protein CG_Chr11 - View
Cucumis melo MELO3C004631.2 casein kinase I chr05 + View
Corchorus olitorius COL.COLO4_18178 hypothetical protein AWUE01016433.1 - View
Carica papaya Cpa.g.sc25.78 supercontig_25 + View
Carica papaya Cpa.g.sc28.150 supercontig_28 - View
Chenopodium quinoa AUR62029036 At4g26100: Casein kinase I isoform delta-like C_Quinoa_Scaffold_2412 - View
Chenopodium quinoa AUR62033937 At4g26100: Casein kinase I isoform delta-like C_Quinoa_Scaffold_4191 - View
Capsella rubella Carub.0003s3375 K02218 - casein kinase 1 (CSNK1, CK1) scaffold_3 - View
Capsella rubella Carub.0008s1751 K02218 - casein kinase 1 (CSNK1, CK1) scaffold_8 + View
Cucumis sativus L. CsaV3_2G001390 Casein kinase, putative chr2 - View
Daucus carota DCAR_028270 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv42337 GWHABJS00000013 + View
Davidia involucrata Dinv37894 GWHABJS00000006 + View
Davidia involucrata Dinv36785 GWHABJS00000001 + View
Durio zibethinus Duzib192G0092 NW_019168037.1 - View
Durio zibethinus Duzib150G0571 NW_019167882.1 - View
Durio zibethinus Duzib168G1569 NW_019168159.1 - View
Durio zibethinus Duzib235G1288 NW_019167982.1 + View
Durio zibethinus Duzib187G1848 NW_019167860.1 + View
Eucalyptus grandis Eucgr.C03421 Chr03 - View
Eucalyptus grandis Eucgr.J02844 Chr10 - View
Erythranthe guttata Migut.L01510 scaffold_12 + View
Erythranthe guttata Migut.D00956 scaffold_4 - View
Erythranthe guttata Migut.I01042 scaffold_9 + View
Eutrema salsugineum Thhalv10013573m.g K02218 - casein kinase 1 (CSNK1, CK1) scaffold_2 - View
Eutrema salsugineum Thhalv10022691m.g K02218 - casein kinase 1 (CSNK1, CK1) scaffold_11 + View
Fragaria x ananassa FAN26G1301 K02218 - casein kinase 1 (CSNK1, CK1) Fvb1-2 - View
Fragaria x ananassa FAN05G0588 K02218 - casein kinase 1 (CSNK1, CK1) Fvb6-3 - View
Fragaria x ananassa FAN14G3689 K02218 - casein kinase 1 (CSNK1, CK1) Fvb6-1 - View
Fragaria x ananassa FAN26G0943 K02218 - casein kinase 1 (CSNK1, CK1) Fvb1-2 + View
Fragaria x ananassa FAN28G2992 K02218 - casein kinase 1 (CSNK1, CK1) Fvb1-1 - View
Fragaria x ananassa FAN02G3753 K02218 - casein kinase 1 (CSNK1, CK1) Fvb6-4 + View
Fragaria x ananassa FAN23G1735 K02218 - casein kinase 1 (CSNK1, CK1) Fvb1-3 + View
Fragaria x ananassa FAN19G2342 K02218 - casein kinase 1 (CSNK1, CK1) Fvb1-4 + View
Fragaria vesca FvH4_1g07860 K02218 - casein kinase 1 (CSNK1, CK1) Fvb1 + View
Gossypium hirsutum Gohir.A05G136200 K02218 - casein kinase 1 (CSNK1, CK1) A05 + View
Gossypium hirsutum Gohir.A05G031000 PTHR11909//PTHR11909:SF154 - CASEIN KINASE-RELATED // PROTEIN KINASE FAMILY PROTEIN A05 + View
Gossypium hirsutum Gohir.D05G032400 K02218 - casein kinase 1 (CSNK1, CK1) D05 + View
Gossypium hirsutum Gohir.A07G012800 K02218 - casein kinase 1 (CSNK1, CK1) A07 - View
Gossypium hirsutum Gohir.D05G138200 K02218 - casein kinase 1 (CSNK1, CK1) D05 + View
Gossypium hirsutum Gohir.D07G012600 K02218 - casein kinase 1 (CSNK1, CK1) D07 - View
Glycine max Glyma.13G105900 K02218 - casein kinase 1 (CSNK1, CK1) Gm13 + View
Glycine max Glyma.09G065200 K02218 - casein kinase 1 (CSNK1, CK1) Gm09 + View
Glycine max Glyma.15G171100 K02218 - casein kinase 1 (CSNK1, CK1) Gm15 + View
Glycine max Glyma.17G053500 K02218 - casein kinase 1 (CSNK1, CK1) Gm17 - View
Gossypium raimondii Gorai.009G142600 Chr09 + View
Gossypium raimondii Gorai.001G013300 Chr01 - View
Gossypium raimondii Gorai.009G032600 Chr09 + View
Hydrangea macrophylla Hma1.2p1_0672F.1_g201030 Hma1.2p1_0672F.1 - View
Lupinus albus Lalb_Chr13g0299611 K02218 - casein kinase 1 (CSNK1, CK1) Lalb_Chr13 - View
Lupinus albus Lalb_Chr12g0199871 K02218 - casein kinase 1 (CSNK1, CK1) Lalb_Chr12 + View
Lotus japonicus Lj4g0017138 K02218 - casein kinase 1 (CSNK1, CK1) chr4 - View
Lotus japonicus Lj3g0027237 K02218 - casein kinase 1 (CSNK1, CK1) chr3 + View
Lonicera japonica Lj4A291T54 GWHAAZE00000004 - View
Lonicera japonica Lj7A679G75 GWHAAZE00000007 + View
Lactuca sativa Lsat_1_v5_gn_5_135520 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI04_g36905_MAGBIO AED:0.12 Chr04 - View
Malus domestica MD02G1082400 casein kinase 1 Chr02 + View
Malus domestica MD09G1190100 casein kinase 1-like protein 2 Chr09 - View
Manihot esculenta Manes.04G141300 Chromosome04 + View
Manihot esculenta Manes.16G100200 Chromosome16 - View
Manihot esculenta Manes.11G023900 Chromosome11 - View
Manihot esculenta Manes.03G035700 Chromosome03 + View
Medicago truncatula Medtr2g039930 casein kinase I-like protein chr2 + View
Medicago truncatula Medtr4g126010 casein kinase I-like protein chr4 - View
Nelumbo nucifera Nn8g38798 chr8 - View
Petunia axillaris Peaxi162Scf00207g01345 casein kinase 1-like protein 2 Peaxi162Scf00207 + View
Petunia axillaris Peaxi162Scf00038g01715 casein kinase 1-like protein 2 Peaxi162Scf00038 + View
Punica granatum PGR142G0070 NC_045128.1 - View
Prunus persica Prupe.3G046000 K02218 - casein kinase 1 (CSNK1, CK1) Pp03 - View
Prunus persica Prupe.7G206400 K02218 - casein kinase 1 (CSNK1, CK1) Pp07 - View
Pisum sativum Psat1g132120 Protein kinase domain chr1LG6 + View
Populus trichocarpa Potri.006G147800 K02218 - casein kinase 1 (CSNK1, CK1) Chr06 - View
Phaseolus vulgaris Phvul.009G230800 K02218 - casein kinase 1 (CSNK1, CK1) Chr09 - View
Phaseolus vulgaris Phvul.003G135100 K02218 - casein kinase 1 (CSNK1, CK1) Chr03 - View
Phaseolus vulgaris Phvul.010G136500 K02218 - casein kinase 1 (CSNK1, CK1) Chr10 - View
Quercus lobata QL02p062153 CM012294 - View
Quercus lobata QL02p000763 CM012294 - View
Quercus lobata QL05p009695 5 - View
Rosa chinensis RcHm_v2.0_Chr2g0093731 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim05G0016900 chr05 - View
Rhododendron simsii Rhsim03G0231400 chr03 - View
Salvia bowleyana SalBow1G0280 GWHASIU00000001 - View
Salvia bowleyana SalBow6G3545 GWHASIU00000002 + View
Salix brachista Sabra03G0022800 GWHAAZH00000003 - View
Salix brachista Sabra06G0116900 GWHAAZH00000006 - View
Sechium edule Sed0013014 LG03 + View
Solanum lycopersicum Solyc03g121820.3 Casein kinase (AHRD V3.3 *** A2I5G0_BETVU) SL4.0ch03 + View
Solanum lycopersicum Solyc07g040720.3 Casein kinase (AHRD V3.3 *** A2I5G0_BETVU) SL4.0ch07 + View
Schrenkiella parvula Sp3g32850 K02218 - casein kinase 1 (CSNK1, CK1) ch3-6 - View
Schrenkiella parvula Sp6g18720 K02218 - casein kinase 1 (CSNK1, CK1) ch6-6 + View
Solanum pennellii Sopen03g040630 Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus. | casein kinase 1-like protein 2 (CKL2) | FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding | INVOLVED IN: protein amino acid phosphorylation | LOCATED IN: nucleus, plasma membrane, cytoplasm | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Protein kinase, catalytic domain , Serine/threonine-protein kinase-like domain , Protein kinase-like domain , Serine/threonine-protein kinase, active site | BEST Arabidopsis thaliana protein match is: casein kinase 1 Spenn-ch03 + View
Solanum pennellii Sopen07g019460 Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus. | casein kinase 1-like protein 2 (CKL2) | FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding | INVOLVED IN: protein amino acid phosphorylation | LOCATED IN: nucleus, plasma membrane, cytoplasm | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site , Protein kinase, catalytic domain , Serine/threonine-protein kinase-like domain , Protein kinase-like domain , Serine/threonine-protein kinase, active site | BEST Arabidopsis thaliana protein match is: casein kinase 1 Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400002577 Casein kinase ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400032791 Casein kinase ST4.03ch07 + View
Selenicereus undatus Hund06664 Scaffold_33676 - View
Theobroma cacao Thecc.09G085600 Casein kinase 1-like protein 2 Chromosome_9 - View
Theobroma cacao Thecc.06G114800 Casein kinase 1-like protein 2 Chromosome_6 + View
Tarenaya hassleriana THA.LOC104811750 casein kinase 1-like protein 1 NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104812234 casein kinase 1-like protein 2 NW_010965372.1 - View
Trifolium pratense TPR.G9455 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI32G1024 NC_052254.1 + View
Tripterygium wilfordii TWI63G0056 NC_052240.1 + View
Tripterygium wilfordii TWI34G0498 NC_052235.1 - View
Vaccinium macrocarpon vmacro06301 Similar to CKL2: Casein kinase 1-like protein 2 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G2392 CM024074.1 + View
Vigna mungo VMungo1309G2991 CM024072.1 + View
Vigna mungo VMungo0331G0250 CM024078.1 + View
Vitis vinifera GSVIVG01015176001 chr11 - View