Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold64G21982 scaffold64 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G4460 LG-11 - View
Acer truncatum Atru.chr7.2490 chr7 + View
Actinidia chinensis Actinidia22319 Lachesis_group23 + View
Actinidia chinensis Actinidia13214 Lachesis_group18 - View
Actinidia chinensis Actinidia21917 Lachesis_group15 + View
Arabidopsis lyrata AL6G36920 scaffold_6 - View
Avicennia marina MSTRG.1732 ScioBoG_102834_HRSCAF_103055 + View
Avicennia marina MSTRG.11600 ScioBoG_17730_HRSCAF_17811 - View
Avicennia marina MSTRG.26027 ScioBoG_4119_HRSCAF_4138 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K7E7DP KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT5G25270 Ubiquitin-like superfamily protein Ubiquitin-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956)%2C Ubiquitin (InterPro:IPR000626)%2C Ubiquitin supergroup (InterPro:IPR019955)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G42220.1)%3B Has 11489 Blast hits to 5746 proteins in 742 species: Archae - 0%3B Bacteria - 401%3B Metazoa - 4954%3B Fungi - 1390%3B Plants - 2430%3B Viruses - 186%3B Other Eukaryotes - 2128 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT5G11080 Ubiquitin-like superfamily protein Ubiquitin-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626)%2C Ubiquitin supergroup (InterPro:IPR019955)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G25270.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Ubiquitin-like superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: sperm cell%2C male gametophyte%2C flower%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626)%2C Ubiquitin supergroup (InterPro:IPR019955)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT5G25270.1). Chr5 - View
Brassica carinata BcaNung03210 Contig1081 - View
Brassica carinata BcaNung04976 Contig1803 + View
Brassica napus A06p35990 A06 - View
Brassica napus C07p42610 C07 + View
Brassica oleracea BolC7t44790H C7 + View
Brassica rapa BraA06t26523Z A06 - View
Beta vulgaris EL10Ac2g04161 PTHR10744//PTHR10744:SF10 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER // SUBFAMILY NOT NAMED Chr2_EL10_PGA_scaffold6 - View
Camellia sinensis var. sinensis CSS0019670 40S ribosomal S11 [Gossypium arboreum] Chr12 - View
Corylus avellana Haze_21467 Similar to RPS11: 40S ribosomal protein S11 (Euphorbia esula OX%3D3993) 3 - View
Coffea canephora Cc08_g00270 40S ribosomal protein S11 chr8 - View
Carpinus fangiana Cfa013109 Cfa05 - View
Carya illinoinensis CiPaw.08G008700 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Chr08 - View
Carya illinoinensis CiPaw.07G226600 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Chr07 + View
Citrullus lanatus ClCG08G013490 40S ribosomal protein S11, putative CG_Chr08 + View
Cucumis melo MELO3C011276.2 40S ribosomal protein S11 chr03 - View
Carica papaya Cpa.g.sc187.17 supercontig_187 + View
Carica papaya Cpa.g.sc46.78 supercontig_46 + View
Chenopodium quinoa AUR62012439 RPS11: 40S ribosomal protein S11 C_Quinoa_Scaffold_1995 + View
Chenopodium quinoa AUR62031563 RPS11: 40S ribosomal protein S11 C_Quinoa_Scaffold_1206 + View
Capsella rubella Carub.0006s2309 PTHR15204 - SCYTHE/BAT3 scaffold_6 - View
Cucumis sativus L. CsaV3_2G032240 40S ribosomal protein S11 chr2 + View
Davidia involucrata Dinv15882 GWHABJS00000017 + View
Davidia involucrata Dinv18182 GWHABJS00000003 + View
Durio zibethinus Duzib168G2231 NW_019168159.1 + View
Durio zibethinus Duzib150G0541 NW_019167882.1 + View
Eucalyptus grandis Eucgr.C02730 Chr03 - View
Erythranthe guttata Migut.A00011 scaffold_1 - View
Erythranthe guttata Migut.E01818 scaffold_5 + View
Eutrema salsugineum Thhalv10003804m.g PTHR15204 - SCYTHE/BAT3 scaffold_6 - View
Fragaria x ananassa FAN15G0342 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Fvb2-4 - View
Fragaria x ananassa FAN27G0747 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Fvb2-1 - View
Fragaria x ananassa FAN24G0173 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Fvb2-2 + View
Fragaria x ananassa FAN20G2743 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Fvb2-3 - View
Fragaria vesca FvH4_2g28364 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Fvb2 - View
Glycine max Glyma.17G105900 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Gm17 - View
Gossypium raimondii Gorai.010G056800 Chr10 + View
Lupinus albus Lalb_Chr13g0301241 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Lalb_Chr13 - View
Lupinus albus Lalb_Chr12g0198481 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Lalb_Chr12 + View
Lupinus albus Lalb_Chr07g0179451 KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein Lalb_Chr07 + View
Lonicera japonica Lj7A728G59 GWHAAZE00000007 + View
Lonicera japonica Lj8P730T20 GWHAAZE00000008 + View
Malus domestica MD15G1129800 ribosomal protein S11-beta Chr15 + View
Malus domestica MD08G1153000 ribosomal protein S11-beta Chr08 + View
Malus domestica MD15G1160700 ribosomal protein S11-beta Chr15 - View
Manihot esculenta Manes.14G136528 Chromosome14 + View
Manihot esculenta Manes.16G125500 Chromosome16 + View
Nelumbo nucifera Nn8g39683 chr8 + View
Petunia axillaris Peaxi162Scf00116g00106 40S ribosomal protein S11 Peaxi162Scf00116 - View
Punica granatum PGR044G2142 NC_045134.1 + View
Prunus persica Prupe.7G255900 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Pp07 - View
Prunus persica Prupe.1G485300 K02949 - small subunit ribosomal protein S11e (RP-S11e, RPS11) Pp01 + View
Quercus lobata QL02p091098 CM012294 + View
Quercus lobata QL02p020519 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0297321 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim02G0205100 chr02 + View
Salvia bowleyana SalBow4G2704 GWHASIU00000008 - View
Sechium edule Sed0016082 LG01 + View
Schrenkiella parvula Sp2g22260 KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein ch2-4 + View
Trochodendron aralioides TAR625G0898 group4 + View
Theobroma cacao Thecc.09G020200 Chromosome_9 - View
Theobroma cacao Thecc.09G140100 Ubiquitin-like superfamily protein Chromosome_9 + View
Tripterygium wilfordii TWI63G0909 NC_052240.1 + View
Tripterygium wilfordii TWI34G0077 NC_052235.1 - View
Vaccinium macrocarpon vmacro11206 Similar to CIP73: Ubiquitin-like domain-containing protein CIP73 (Lotus japonicus OX%3D34305) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G1990 CM024074.1 + View
Vitis vinifera GSVIVG01035927001 chr4 - View