Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG7G8980 | LG-7 | - | View | |
Acer truncatum | Atru.chr11.1332 | chr11 | + | View | |
Actinidia chinensis | Actinidia38385 | Lachesis_group15 | - | View | |
Actinidia chinensis | Actinidia13670 | Lachesis_group10 | - | View | |
Actinidia chinensis | Actinidia14863 | Lachesis_group14 | - | View | |
Arabidopsis lyrata | AL1G39780 | scaffold_1 | - | View | |
Arabidopsis lyrata | AL2G27570 | scaffold_2 | + | View | |
Avicennia marina | MSTRG.2253 | ScioBoG_102834_HRSCAF_103055 | + | View | |
Avicennia marina | MSTRG.13509 | ScioBoG_18778_HRSCAF_18863 | - | View | |
Aquilegia oxysepala | Aqoxy3G00348 | CHR03 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.LE8ECZ | KOG2881 - Predicted membrane protein | arahy.Tifrunner.gnm1.Arahy.19 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.UC30TE | KOG2881 - Predicted membrane protein | arahy.Tifrunner.gnm1.Arahy.09 | + | View |
Arabidopsis thaliana | AT1G68650 | Uncharacterized protein family (UPF0016) Uncharacterized protein family (UPF0016)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727)%3B BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G25520.1)%3B Has 1855 Blast hits to 1773 proteins in 684 species: Archae - 37%3B Bacteria - 1050%3B Metazoa - 159%3B Fungi - 141%3B Plants - 212%3B Viruses - 0%3B Other Eukaryotes - 256 (source: NCBI BLink). | Chr1 | + | View |
Arabidopsis thaliana | AT1G25520 | Uncharacterized protein family (UPF0016) Uncharacterized protein family (UPF0016)%3B INVOLVED IN: response to karrikin%3B LOCATED IN: membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0016 (InterPro:IPR001727)%3B BEST Arabidopsis thaliana protein match is: Uncharacterized protein family (UPF0016) (TAIR:AT1G68650.1)%3B Has 1806 Blast hits to 1733 proteins in 669 species: Archae - 27%3B Bacteria - 1021%3B Metazoa - 159%3B Fungi - 140%3B Plants - 210%3B Viruses - 0%3B Other Eukaryotes - 249 (source: NCBI BLink). | Chr1 | + | View |
Beta vulgaris | EL10Ac6g14462 | KOG2881 - Predicted membrane protein | Chr6_EL10_PGA_scaffold0 | + | View |
Camellia sinensis var. sinensis | CSS0010006 | PREDICTED: GDT1-like protein 4 [Cucumis melo] | Chr6 | - | View |
Cannabis sativa | CANSAT64G1498 | NC_044379.1 | - | View | |
Cicer arietinum L. | Ca_11192_v3 | Ca_LG4_v3 | + | View | |
Corylus avellana | Haze_17451 | Similar to At1g25520: GDT1-like protein 4 (Arabidopsis thaliana OX%3D3702) | 7 | - | View |
Coffea canephora | Cc07_g08950 | GDT1-like protein 4 | chr7 | + | View |
Coffea canephora | Cc11_g10470 | GDT1-like protein 4 | chr11 | + | View |
Citrus clementina | Ciclev10032658m.g | scaffold_4 | + | View | |
Cardamine hirsuta | CARHR061460 | Transmembrane protein | Chr2 | + | View |
Citrullus lanatus | ClCG08G005110 | Transmembrane protein | CG_Chr08 | - | View |
Cucumis melo | MELO3C011548.2 | GDT1-like protein 5 | chr03 | + | View |
Carica papaya | Cpa.g.sc1.207 | supercontig_1 | + | View | |
Chenopodium quinoa | AUR62002908 | At1g68650: GDT1-like protein 5 | C_Quinoa_Scaffold_1000 | + | View |
Capsella rubella | Carub.0002s1519 | PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED | scaffold_2 | + | View |
Capsella rubella | Carub.0001s2496 | PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED | scaffold_1 | - | View |
Cucumis sativus L. | CsaV3_6G003330 | GDT1-like protein | chr6 | - | View |
Davidia involucrata | Dinv21119 | GWHABJS00000018 | - | View | |
Davidia involucrata | Dinv04488 | GWHABJS00000008 | + | View | |
Durio zibethinus | Duzib251G0949 | NW_019167971.1 | + | View | |
Erigeron canadensis | ECA233G1121 | Conyza_canadensis_scaffold:1 | - | View | |
Erigeron canadensis | ECA234G3415 | Conyza_canadensis_scaffold:4 | - | View | |
Eucalyptus grandis | Eucgr.B03039 | Chr02 | + | View | |
Eucalyptus grandis | Eucgr.G02342 | Chr07 | + | View | |
Erythranthe guttata | Migut.L01090 | scaffold_12 | + | View | |
Erythranthe guttata | Migut.E00316 | scaffold_5 | - | View | |
Eutrema salsugineum | Thhalv10008674m.g | PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED | scaffold_5 | + | View |
Eutrema salsugineum | Thhalv10019088m.g | PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED | scaffold_9 | - | View |
Fragaria x ananassa | FAN07G0105 | KOG2881 - Predicted membrane protein | Fvb4-4 | - | View |
Fragaria x ananassa | FAN22G0038 | KOG2881 - Predicted membrane protein | Fvb4-1 | + | View |
Fragaria x ananassa | FAN17G3041 | PF01169 - Uncharacterized protein family UPF0016 (UPF0016) | Fvb4-2 | - | View |
Fragaria x ananassa | FAN12G0469 | KOG2881 - Predicted membrane protein | Fvb4-3 | - | View |
Fragaria vesca | FvH4_4g27780 | KOG2881 - Predicted membrane protein | Fvb4 | + | View |
Gossypium hirsutum | Gohir.A13G053498 | KOG2881 - Predicted membrane protein | A13 | - | View |
Glycine max | Glyma.10G276300 | PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED | Gm10 | + | View |
Glycine max | Glyma.20G113400 | PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED | Gm20 | - | View |
Helianthus annuus | HanXRQChr08g0214301 | Probable uncharacterized protein family (UPF0016) | HanXRQChr08 | + | View |
Lupinus albus | Lalb_Chr06g0166181 | KOG2881 - Predicted membrane protein | Lalb_Chr06 | + | View |
Lupinus albus | Lalb_Chr02g0146111 | KOG2881 - Predicted membrane protein | Lalb_Chr02 | + | View |
Lotus japonicus | Lj5g0018528 | KOG2881 - Predicted membrane protein | chr5 | - | View |
Lonicera japonica | Lj6C762T7 | GWHAAZE00000006 | + | View | |
Lonicera japonica | Lj3A1018T63 | GWHAAZE00000003 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_8_38801 | Lsat_1_v8_lg_8 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_4_18960 | Lsat_1_v8_lg_4 | + | View | |
Malus domestica | MD13G1045000 | Uncharacterized protein family (UPF0016) | Chr13 | + | View |
Malus domestica | MD16G1046300 | Uncharacterized protein family (UPF0016) | Chr16 | + | View |
Manihot esculenta | Manes.14G098900 | Chromosome14 | - | View | |
Nelumbo nucifera | Nn4g23760 | chr4 | - | View | |
Prunus persica | Prupe.1G306900 | Pp01 | - | View | |
Pisum sativum | Psat6g229680 | Uncharacterized protein family UPF0016 | chr6LG2 | + | View |
Papaver somniferum | PSO017G7358 | NC_039362.1 | + | View | |
Populus trichocarpa | Potri.010G128400 | KOG2881 - Predicted membrane protein | Chr10 | + | View |
Phaseolus vulgaris | Phvul.007G025300 | PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED | Chr07 | - | View |
Quercus lobata | QL01p044656 | 1 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr4g0435641 | RcHm_v2.0_Chr4 | + | View | |
Rhododendron simsii | Rhsim09G0111000 | chr09 | + | View | |
Salvia bowleyana | SalBow8G2850 | GWHASIU00000004 | + | View | |
Salix brachista | Sabra08G0089400 | GWHAAZH00000008 | - | View | |
Salix brachista | Sabra10G0097600 | GWHAAZH00000010 | + | View | |
Simmondsia chinensis | Sc11g0003180 | GWHAASQ00000011 | - | View | |
Sechium edule | Sed0017076 | LG03 | - | View | |
Sechium edule | Sed0015668 | LG11 | + | View | |
Schrenkiella parvula | Sp1g22690 | KOG2881 - Predicted membrane protein | ch1-1 | - | View |
Schrenkiella parvula | Sp5g23750 | KOG2881 - Predicted membrane protein | ch5-6 | + | View |
Selenicereus undatus | Hund25091 | Scaffold_3410 | + | View | |
Theobroma cacao | Thecc.02G359300 | GDT1-like protein 4 | Chromosome_2 | + | View |
Tarenaya hassleriana | THA.LOC104821955 | GDT1-like protein 5 | NW_010966617.1 | + | View |
Tripterygium wilfordii | TWI79G1043 | NC_052238.1 | + | View | |
Tripterygium wilfordii | TWI31G0096 | NC_052233.1 | + | View | |
Vaccinium macrocarpon | vmacro10539 | Similar to At1g25520: GDT1-like protein 4 (Arabidopsis thaliana OX%3D3702) | chr8_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo0720G2569 | CM024071.1 | + | View | |
Vitis vinifera | GSVIVG01011934001 | chr1 | - | View |