Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold36G14449 scaffold36 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G7120 LG-2 - View
Acer truncatum Atru.chr11.1654 chr11 - View
Actinidia chinensis Actinidia32297 Lachesis_group4 - View
Actinidia chinensis Actinidia31943 Lachesis_group15 + View
Arabidopsis lyrata AL5G13240 scaffold_5 + View
Arabidopsis lyrata AL1G25690 scaffold_1 - View
Avicennia marina MSTRG.746 ScioBoG_102831_HRSCAF_103044 + View
Amaranthus hybridus Ah.03g138990 AmaHy_arrow1_Scaffold_3 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GZ07ZQ PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VPB6CA PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VJQ0JP PTHR10108//PTHR10108:SF926 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT2G03480 QUASIMODO2 LIKE 2 Encodes QUASIMODO2 LIKE2 (QUL2)%2C a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2)%2C AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development. QUASIMODO2 LIKE 2 (QUL2)%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: male gametophyte%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248%2C methyltransferase putative (InterPro:IPR004159)%3B BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 1 (TAIR:AT1G13860.3)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT1G13860 QUASIMODO2 LIKE 1 Encodes QUASIMODO2 LIKE1 (QUL1)%2C a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2)%2C AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development. QUASIMODO2 LIKE 1 (QUL1)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248%2C methyltransferase putative (InterPro:IPR004159)%3B BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 2 (TAIR:AT2G03480.1)%3B Has 1203 Blast hits to 1184 proteins in 159 species: Archae - 7%3B Bacteria - 235%3B Metazoa - 0%3B Fungi - 10%3B Plants - 903%3B Viruses - 0%3B Other Eukaryotes - 48 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB07g30297 ChrB07 - View
Brassica carinata BcaC06g31179 ChrC06 - View
Brassica carinata BcaC06g33994 ChrC06 - View
Brassica carinata BcaC04g21486 ChrC04 - View
Brassica carinata BcaB07g30668 ChrB07 - View
Brassica carinata BcaC03g17218 ChrC03 + View
Brassica napus A02p33470 A02 + View
Brassica napus C09p31250 C09 + View
Brassica napus C02p51460 C02 + View
Brassica napus A06p43110 A06 - View
Brassica napus C07p33940 C07 + View
Brassica napus A09p36880 A09 + View
Brassica oleracea BolC9t55981H C9 + View
Brassica oleracea BolC2t11234H C2 + View
Brassica rapa BraA09t38038Z A09 + View
Beta vulgaris EL10Ac6g14987 PTHR10108//PTHR10108:SF817 - METHYLTRANSFERASE // METHYLTRANSFERASE PMT4-RELATED Chr6_EL10_PGA_scaffold0 - View
Cicer arietinum L. Ca_18804_v3 Ca_LG6_v3 - View
Corylus avellana Haze_11920 Similar to At2g03480: Probable methyltransferase PMT5 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc11_g12140 Probable methyltransferase PMT5 chr11 - View
Citrus clementina Ciclev10031472m.g scaffold_4 - View
Carpinus fangiana Cfa008887 Cfa03 - View
Cardamine hirsuta CARHR145830 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Chr5 + View
Carya illinoinensis CiPaw.06G091800 PTHR10108//PTHR10108:SF817 - METHYLTRANSFERASE // METHYLTRANSFERASE PMT4-RELATED Chr06 + View
Carya illinoinensis CiPaw.05G126200 PTHR10108//PTHR10108:SF817 - METHYLTRANSFERASE // METHYLTRANSFERASE PMT4-RELATED Chr05 - View
Citrullus lanatus ClCG05G023770 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein LENGTH=684 CG_Chr05 - View
Citrullus lanatus ClCG08G010330 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein LENGTH=684 CG_Chr08 + View
Cucumis melo MELO3C012145.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 1 chr10 - View
Corchorus olitorius COL.COLO4_27902 putative S-adenosyl-L-methionine-dependent methyltransferase protein AWUE01019713.1 - View
Carica papaya Cpa.g.sc1.113 supercontig_1 + View
Chenopodium quinoa AUR62007929 At2g03480: Probable methyltransferase PMT5 C_Quinoa_Scaffold_2646 - View
Chenopodium quinoa AUR62003114 At2g03480: Probable methyltransferase PMT5 C_Quinoa_Scaffold_1000 - View
Capsella rubella Carub.0001s1356 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED scaffold_1 - View
Capsella rubella Carub.0005s0244 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED scaffold_5 + View
Cucumis sativus L. CsaV3_5G033230 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein chr5 + View
Daucus carota DCAR_030036 hypothetical protein DCARv2_Chr9 + View
Daucus carota DCAR_027463 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv34080 GWHABJS00000008 - View
Davidia involucrata Dinv16721 GWHABJS00000018 + View
Durio zibethinus Duzib248G0240 NW_019168048.1 + View
Durio zibethinus Duzib251G0071 NW_019167971.1 - View
Durio zibethinus Duzib268G0696 NW_019168270.1 - View
Erigeron canadensis ECA234G0867 Conyza_canadensis_scaffold:4 - View
Erigeron canadensis ECA246G5113 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.G02456 Chr07 + View
Erythranthe guttata Migut.K00110 scaffold_11 - View
Erythranthe guttata Migut.L01200 scaffold_12 - View
Eutrema salsugineum Thhalv10003873m.g scaffold_6 - View
Fragaria x ananassa FAN17G0514 PF03141//PF03478 - Putative S-adenosyl-L-methionine-dependent methyltransferase (Methyltransf_29) // Protein of unknown function (DUF295) (DUF295) Fvb4-2 + View
Fragaria x ananassa FAN12G0648 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED Fvb4-3 + View
Fragaria x ananassa FAN22G1236 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED Fvb4-1 - View
Fragaria x ananassa FAN07G1642 PTHR10108//PTHR10108:SF817 - METHYLTRANSFERASE // METHYLTRANSFERASE PMT4-RELATED Fvb4-4 + View
Fragaria vesca FvH4_4g30250 PTHR10108//PTHR10108:SF817 - METHYLTRANSFERASE // METHYLTRANSFERASE PMT4-RELATED Fvb4 - View
Gossypium hirsutum Gohir.D02G129200 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED D02 + View
Gossypium hirsutum Gohir.A13G081766 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED A13 - View
Gossypium hirsutum Gohir.D12G165100 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED D12 - View
Gossypium hirsutum Gohir.D13G081400 2.1.1.41 - Sterol 24-C-methyltransferase / Zymosterol-24-methyltransferase D13 + View
Gossypium hirsutum Gohir.A12G161800 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED A12 - View
Glycine max Glyma.02G115600 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED Gm02 + View
Glycine max Glyma.07G226100 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED Gm07 - View
Glycine max Glyma.01G057500 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED Gm01 + View
Glycine max Glyma.20G026000 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED Gm20 - View
Gossypium raimondii Gorai.013G093300 Chr13 + View
Gossypium raimondii Gorai.008G177800 Chr08 - View
Helianthus annuus HanXRQChr12g0375321 Putative putative S-adenosyl-L-methionine-dependent methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase HanXRQChr12 - View
Helianthus annuus HanXRQChr08g0211851 Putative putative S-adenosyl-L-methionine-dependent methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase HanXRQChr08 - View
Helianthus annuus HanXRQChr12g0363021 Putative putative S-adenosyl-L-methionine-dependent methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase HanXRQChr12 + View
Lupinus albus Lalb_Chr09g0329011 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED Lalb_Chr09 - View
Lotus japonicus Lj2g0019091 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED chr2 + View
Lonicera japonica Lj6A780G49 GWHAAZE00000006 - View
Lonicera japonica Lj3C1030T21 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_8_47881 Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_3_56021 Lsat_1_v8_lg_3 + View
Lactuca sativa Lsat_1_v5_gn_4_12401 Lsat_1_v8_lg_4 + View
Malus domestica MD13G1063700 QUASIMODO2 LIKE 2 Chr13 - View
Malus domestica MD16G1062200 QUASIMODO2 LIKE 2 Chr16 - View
Manihot esculenta Manes.01G028700 Chromosome01 - View
Manihot esculenta Manes.05G108800 Chromosome05 + View
Medicago truncatula Medtr4g083030 methyltransferase PMT16, putative chr4 + View
Nicotiana tabacum Nitab4.5_0000014g0330 Putative S-adenosyl-L-methionine-dependent methyltransferase Nitab4.5_0000014 + View
Olea europaea Oeu048148.1 chr12 + View
Petunia axillaris Peaxi162Scf00026g01922 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Peaxi162Scf00026 - View
Punica granatum PGR119G1431 NC_045132.1 - View
Prunus persica Prupe.1G284100 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED Pp01 - View
Populus trichocarpa Potri.008G094800 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED Chr08 + View
Populus trichocarpa Potri.010G159400 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED Chr10 - View
Phaseolus vulgaris Phvul.003G043400 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED Chr03 - View
Rosa chinensis RcHm_v2.0_Chr4g0438551 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim12G0076100 chr12 - View
Salvia bowleyana SalBow2G0256 GWHASIU00000007 + View
Salix brachista Sabra08G0071300 GWHAAZH00000008 + View
Salix brachista Sabra10G0121100 GWHAAZH00000010 - View
Simmondsia chinensis Sc11g0002380 GWHAASQ00000011 + View
Sechium edule Sed0023909 LG07 - View
Solanum lycopersicum Solyc05g012450.4 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *-* A0A2U1PA46_ARTAN) SL4.0ch05 - View
Solanum lycopersicum Solyc01g010370.3 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1P6Q5_ARTAN) SL4.0ch01 - View
Solanum lycopersicum Solyc04g005430.4 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (AHRD V3.3 *** A0A2U1PA46_ARTAN) SL4.0ch04 - View
Schrenkiella parvula Sp2g14390 PTHR10108//PTHR10108:SF817 - METHYLTRANSFERASE // METHYLTRANSFERASE PMT4-RELATED ch2-4 + View
Schrenkiella parvula Sp1g12100 PTHR10108:SF817 - METHYLTRANSFERASE PMT4-RELATED ch1-1 + View
Solanum pennellii Sopen05g007270 Encodes QUASIMODO2 LIKE2 (QUL2), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development. | QUASIMODO2 LIKE 2 (QUL2) | LOCATED IN: mitochondrion | EXPRESSED IN: male gametophyte, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative | BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 1 Spenn-ch05 - View
Solanum pennellii Sopen03g001600 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | INVOLVED IN: biological_process unknown | LOCATED IN: Golgi apparatus, plasma membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative | BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Spenn-ch03 + View
Solanum pennellii Sopen04g001430 Encodes QUASIMODO2 LIKE1 (QUL1), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development. | QUASIMODO2 LIKE 1 (QUL1) | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: cultured cell | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative | BEST Arabidopsis thaliana protein match is: QUASIMODO2 LIKE 2 Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400028378 ATP binding protein ST4.03ch05 + View
Solanum tuberosum PGSC0003DMG400002844 ATP binding protein ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400013406 S-adenosylmethionine-dependent methyltransferase ST4.03ch03 + View
Selenicereus undatus Hund05843 Scaffold_19641 - View
Theobroma cacao Thecc.02G333000 Quasimodo2 like 2 Chromosome_2 - View
Tarenaya hassleriana THA.LOC104805190 probable methyltransferase PMT5 NW_010961290.1 + View
Trifolium pratense TPR.G34074 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI31G0885 NC_052233.1 - View
Tripterygium wilfordii TWI79G1468 NC_052238.1 - View
Utricularia gibba unitig_22.g6912 unitig_22 - View
Utricularia gibba unitig_22.g6495 unitig_22 - View
Vaccinium macrocarpon vmacro01323 Similar to At2g03480: Probable methyltransferase PMT5 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G0520 CM024074.1 + View