Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold52G19216 scaffold52 + View
SGA_v2.0_scaffold104G30196 scaffold104 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G14490 LG-10 - View
Acer truncatum Atru.chr5.159 chr5 - View
Acer truncatum Atru.chr9.1260 chr9 + View
Actinidia chinensis Actinidia33498 Lachesis_group16 - View
Actinidia chinensis Actinidia14397 Lachesis_group6 - View
Actinidia chinensis Actinidia12652 Lachesis_group23 + View
Arabidopsis lyrata AL5G42620 scaffold_5 - View
Arabidopsis lyrata AL7G37860 scaffold_7 + View
Avicennia marina MSTRG.17138 ScioBoG_19743_HRSCAF_19834 - View
Aquilegia oxysepala Aqoxy3G02766 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QKY2Z8 PF05553 - Cotton fibre expressed protein (DUF761) arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IYGI6Y PF05553 - Cotton fibre expressed protein (DUF761) arahy.Tifrunner.gnm1.Arahy.04 - View
Arabidopsis thaliana AT3G60380 cotton fiber protein FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1)%3B Has 6102 Blast hits to 3981 proteins in 424 species: Archae - 6%3B Bacteria - 372%3B Metazoa - 2603%3B Fungi - 655%3B Plants - 291%3B Viruses - 28%3B Other Eukaryotes - 2147 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0057G080 AmTr_v1.0_scaffold00111 - View
Brassica carinata BcaB02g07421 ChrB02 + View
Brassica napus C06p26670 C06 - View
Brassica napus A07p25060 A07 - View
Brassica oleracea BolC6t37829H C6 - View
Brassica rapa BraA07t30146Z A07 - View
Beta vulgaris EL10Ac5g12331 PF05553 - Cotton fibre expressed protein (DUF761) Chr5_EL10_PGA_scaffold2 + View
Camellia sinensis var. sinensis CSS0007822 PREDICTED: uncharacterized protein LOC104881830 [Vitis vinifera] Chr6 + View
Camellia sinensis var. sinensis CSS0004447 unnamed protein product [Coffea canephora] Chr14 - View
Camellia sinensis var. sinensis CSS0042834 unnamed protein product [Coffea canephora] Chr12 + View
Capsicum annuum CAN.G362.10 PGAv.1.6.scaffold362 - View
Cannabis sativa CANSAT21G1520 NC_044374.1 + View
Cicer arietinum L. Ca_04031_v3 Ca_LG2_v3 + View
Cicer arietinum L. Ca_21993_v3 Ca_LG7_v3 - View
Corylus avellana Haze_07935 Protein of unknown function 4 + View
Corylus avellana Haze_02809 Protein of unknown function 1 + View
Coffea canephora Cc08_g12030 Putative uncharacterized protein (Fragment) chr8 + View
Coffea canephora Cc02_g24920 Putative uncharacterized protein chr2 + View
Citrus clementina Ciclev10019703m.g scaffold_3 + View
Ceratophyllum demersum CDE11G1070 9 - View
Carpinus fangiana Cfa011088 Cfa04 - View
Cardamine hirsuta CARHR170700 FUNCTIONS IN: molecular_function unknown Chr5 - View
Carya illinoinensis CiPaw.13G027800 PF05553 - Cotton fibre expressed protein (DUF761) Chr13 - View
Carya illinoinensis CiPaw.12G049400 PF05553 - Cotton fibre expressed protein (DUF761) Chr12 + View
Carya illinoinensis CiPaw.11G082800 PF05553 - Cotton fibre expressed protein (DUF761) Chr11 - View
Citrullus lanatus ClCG10G002500 hydroxyproline-rich glycoprotein family protein LENGTH=473 CG_Chr10 + View
Cucumis melo MELO3C013922.2 Glycoprotein chr06 + View
Corchorus olitorius COL.COLO4_12427 hypothetical protein AWUE01014921.1 - View
Carica papaya Cpa.g.sc101.27 supercontig_101 - View
Carica papaya Cpa.g.sc89.63 supercontig_89 + View
Daucus carota DCAR_029769 hypothetical protein DCARv2_Chr9 - View
Daucus carota DCAR_008518 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv39178 GWHABJS00000003 - View
Durio zibethinus Duzib084G0904 NW_019167827.1 + View
Durio zibethinus Duzib138G1759 NW_019167893.1 - View
Durio zibethinus Duzib068G0659 NW_019167838.1 + View
Durio zibethinus Duzib205G1850 NW_019168381.1 + View
Eucalyptus grandis Eucgr.E01574 Chr05 + View
Eucalyptus grandis Eucgr.E00399 Chr05 + View
Eutrema salsugineum Thhalv10005806m.g PF05553 - Cotton fibre expressed protein (DUF761) scaffold_19 + View
Fragaria x ananassa FAN10G1547 PF00254//PF05553 - FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C) // Cotton fibre expressed protein (DUF761) Fvb7-1 + View
Fragaria x ananassa FAN01G1526 PF05553 - Cotton fibre expressed protein (DUF761) Fvb7-4 - View
Fragaria x ananassa FAN18G1828 PF05553 - Cotton fibre expressed protein (DUF761) Fvb5-1 - View
Fragaria x ananassa FAN08G2407 PF05553 - Cotton fibre expressed protein (DUF761) Fvb5-3 + View
Fragaria x ananassa FAN06G1585 PF05553 - Cotton fibre expressed protein (DUF761) Fvb7-2 + View
Fragaria x ananassa FAN04G0448 PF05553 - Cotton fibre expressed protein (DUF761) Fvb5-4 - View
Fragaria x ananassa FAN10G3136 PF00254//PF05553 - FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C) // Cotton fibre expressed protein (DUF761) Fvb7-1 + View
Fragaria x ananassa FAN06G0867 PF00254//PF05553 - FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C) // Cotton fibre expressed protein (DUF761) Fvb7-2 + View
Fragaria vesca FvH4_7g09850 PF05553 - Cotton fibre expressed protein (DUF761) Fvb7 + View
Gossypium hirsutum Gohir.D11G080700 PF05553 - Cotton fibre expressed protein (DUF761) D11 - View
Gossypium hirsutum Gohir.D12G217500 PF05553 - Cotton fibre expressed protein (DUF761) D12 + View
Gossypium hirsutum Gohir.A12G214900 PF05553 - Cotton fibre expressed protein (DUF761) A12 + View
Gossypium hirsutum Gohir.A11G076200 PF05553 - Cotton fibre expressed protein (DUF761) A11 - View
Glycine max Glyma.18G253700 PF05553 - Cotton fibre expressed protein (DUF761) Gm18 - View
Glycine max Glyma.05G062801 PF05553 - Cotton fibre expressed protein (DUF761) Gm05 - View
Glycine max Glyma.09G241900 PF05553 - Cotton fibre expressed protein (DUF761) Gm09 + View
Glycine max Glyma.17G144800 PF05553 - Cotton fibre expressed protein (DUF761) Gm17 - View
Gossypium raimondii Gorai.003G175700 Chr03 - View
Gossypium raimondii Gorai.008G233100 Chr08 + View
Gossypium raimondii Gorai.007G086500 Chr07 - View
Lupinus albus Lalb_Chr03g0040271 Lalb_Chr03 + View
Lotus japonicus Lj1g0002162 PF05553 - Cotton fibre expressed protein (DUF761) chr1 + View
Lotus japonicus Lj4g0006676 PF05553 - Cotton fibre expressed protein (DUF761) chr4 - View
Lonicera japonica Lj8C270T8 GWHAAZE00000008 - View
Malus domestica MD04G1061300 hydroxyproline-rich glycoprotein family protein Chr04 - View
Malus domestica MD02G1216600 Protein of unknown function Chr02 - View
Malus domestica MD06G1054900 hydroxyproline-rich glycoprotein family protein Chr06 - View
Malus domestica MD07G1103700 Protein of unknown function Chr07 + View
Manihot esculenta Manes.01G272300 Chromosome01 + View
Manihot esculenta Manes.05G053100 Chromosome05 + View
Medicago truncatula Medtr4g100530 transmembrane protein, putative chr4 + View
Medicago truncatula Medtr7g007880 transmembrane protein, putative chr7 - View
Nicotiana tabacum Nitab4.5_0003553g0120 Protein of unknown function DUF761, plant Nitab4.5_0003553 - View
Nicotiana tabacum Nitab4.5_0003696g0010 Protein of unknown function DUF761, plant Nitab4.5_0003696 + View
Petunia axillaris Peaxi162Scf00030g00052 Peptidyl-prolyl cis-trans isomerase FKBP20-2 [Morus notabilis] Peaxi162Scf00030 - View
Petunia axillaris Peaxi162Scf00346g00062 conserved hypothetical protein Peaxi162Scf00346 + View
Punica granatum PGR042G0175 NC_045130.1 - View
Punica granatum PGR042G1682 NC_045130.1 + View
Prunus persica Prupe.2G127500 PF05553 - Cotton fibre expressed protein (DUF761) Pp02 + View
Prunus persica Prupe.5G064100 Pp05 + View
Papaver somniferum PSO782G0082 NC_039365.1 + View
Papaver somniferum PSO063G5636 NC_039364.1 - View
Papaver somniferum PSO732G0525 NW_020620714.1 + View
Populus trichocarpa Potri.001G155000 PF05553 - Cotton fibre expressed protein (DUF761) Chr01 + View
Populus trichocarpa Potri.002G136600 PF05553 - Cotton fibre expressed protein (DUF761) Chr02 + View
Populus trichocarpa Potri.014G045300 PF05553 - Cotton fibre expressed protein (DUF761) Chr14 + View
Phaseolus vulgaris Phvul.003G223300 PF05553 - Cotton fibre expressed protein (DUF761) Chr03 - View
Phaseolus vulgaris Phvul.008G045300 PF05553 - Cotton fibre expressed protein (DUF761) Chr08 + View
Quercus lobata QL12p010923 12 + View
Quercus lobata QL04p030920 4 - View
Rosa chinensis RcHm_v2.0_Chr1g0347391 RcHm_v2.0_Chr1 + View
Rhododendron simsii Rhsim01G0138600 chr01 + View
Salvia bowleyana SalBow5G1298 GWHASIU00000003 + View
Salix brachista Sabra02G0105900 GWHAAZH00000002 + View
Salix brachista Sabra14G0033200 GWHAAZH00000014 + View
Salix brachista Sabra03G0049800 GWHAAZH00000003 - View
Salix brachista Sabra01G0124600 GWHAAZH00000001 + View
Sechium edule Sed0017596 LG04 + View
Solanum lycopersicum Solyc08g078290.1 hydroxyproline-rich glycoprotein family protein (AHRD V3.3 *-* AT4G16790.1) SL4.0ch08 + View
Solanum lycopersicum Solyc01g090440.2 cotton fiber protein (AHRD V3.3 *-* AT3G60380.1) SL4.0ch01 - View
Schrenkiella parvula Sp5g02840 PF05553 - Cotton fibre expressed protein (DUF761) ch5-1 + View
Solanum pennellii Sopen01g036230 hypothetical protein Spenn-ch01 - View
Solanum pennellii Sopen08g026790 hydroxyproline-rich glycoprotein family protein | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400026237 Glycoprotein homolog ST4.03ch08 + View
Solanum tuberosum PGSC0003DMG400025985 Conserved gene of unknown function ST4.03ch01 - View
Trochodendron aralioides TAR629G2869 group0 - View
Trochodendron aralioides TAR375G0301 group15 - View
Theobroma cacao Thecc.03G246800 Hydroxyproline-rich glycoprotein family protein Chromosome_3 + View
Theobroma cacao Thecc.01G392600 Uncharacterized protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104802490 uncharacterized protein LOC104802490 NW_010970490.1 + View
Trifolium pratense TPR.G12302 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI81G0105 NC_052251.1 + View
Tripterygium wilfordii TWI59G1099 NC_052248.1 - View
Utricularia gibba unitig_26.g8872 unitig_26 - View
Vaccinium macrocarpon vmacro00014 Protein of unknown function chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G0835 CM024069.1 - View
Vigna mungo VMungo1383G3385 CM024070.1 + View