Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold1G00527 scaffold1 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.1514 chr5 + View
Acer truncatum Atru.chr4.2372 chr4 - View
Actinidia chinensis Actinidia09108 Lachesis_group24 - View
Actinidia chinensis Actinidia19959 Lachesis_group19 - View
Arabidopsis lyrata AL7G41240 scaffold_7 + View
Avicennia marina MSTRG.18264 ScioBoG_22153_HRSCAF_22259 + View
Avicennia marina MSTRG.21530 ScioBoG_26769_HRSCAF_26899 - View
Aquilegia oxysepala Aqoxy5G00405 CHR05 - View
Arabidopsis thaliana AT4G14713 TIFY domain/Divergent CCT motif family protein PPD1 (and its paralog%2C PPD2) encode plant-specific putative DNA-binding proteins. PPD1 and PPD2 are not found in grasses. Overexpression of PPD reduces lamina size by promoting the early arrest of dispersed meristematic cells DMC proliferation during leaf and silique development. Deletion of the PPD locus increases leaf lamina size and results in dome-shaped rather than flat leaves. Siliques are also altered in shape because of extra lamina growth. The curvature of a deltappd leaf reflects the difference between excess growth of the lamina and a limitation to the extension capacity of its perimeter. PEAPOD 1 (PPD1)%3B CONTAINS InterPro DOMAIN/s: Tify (InterPro:IPR010399)%2C Acireductone dioxygenase%2C ARD (InterPro:IPR004313)%2C CCT domain-like (InterPro:IPR018467)%3B BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein (TAIR:AT4G14720.1)%3B Has 256 Blast hits to 255 proteins in 23 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 256%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaNung00344 Contig74 + View
Camellia sinensis var. sinensis CSS0034684 hypothetical protein POPTR_0002s04920g [Populus trichocarpa] Chr11 - View
Camellia sinensis var. sinensis CSS0031620 PREDICTED: protein TIFY 4B-like isoform X2 [Vitis vinifera] Chr13 - View
Capsicum annuum CAN.G771.7 PGAv.1.6.scaffold771 + View
Cannabis sativa CANSAT78G2233 NC_044376.1 + View
Cicer arietinum L. Ca_10855_v3 Ca_LG4_v3 - View
Corylus avellana Haze_11230 Similar to TIFY4B: Protein TIFY 4B (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc01_g19060 Putative Protein TIFY 4B chr1 - View
Citrus clementina Ciclev10021137m.g scaffold_3 - View
Ceratophyllum demersum CDE10G0665 8 + View
Ceratophyllum demersum CDE10G0709 8 + View
Cardamine hirsuta CARHR221170 Protein TIFY 4A Chr7 - View
Carya illinoinensis CiPaw.01G195600 PF06200//PF09425 - tify domain (tify) // Divergent CCT motif (CCT_2) Chr01 - View
Carya illinoinensis CiPaw.02G121300 PF06200//PF09425 - tify domain (tify) // Divergent CCT motif (CCT_2) Chr02 - View
Citrullus lanatus ClCG06G006490 Jasmonate ZIM domain protein k.1 CG_Chr06 + View
Cucumis sativus L. CsaV3_2G013410 protein TIFY 4B isoform X1 chr2 - View
Daucus carota DCAR_002706 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv32890 GWHABJS00000010 - View
Davidia involucrata Dinv22507 GWHABJS00000007 + View
Durio zibethinus Duzib138G1309 NW_019167893.1 + View
Durio zibethinus Duzib211G0433 NW_019168049.1 + View
Durio zibethinus Duzib151G1159 NW_019167904.1 + View
Durio zibethinus Duzib133G1145 NW_019167938.1 + View
Erigeron canadensis ECA248G3352 Conyza_canadensis_scaffold:9 + View
Eucalyptus grandis Eucgr.H03414 Chr08 - View
Eutrema salsugineum Thhalv10025735m.g PF09425 - Divergent CCT motif (CCT_2) scaffold_1 + View
Fragaria x ananassa FAN12G4007 PF06200//PF09425 - tify domain (tify) // Divergent CCT motif (CCT_2) Fvb4-3 - View
Gossypium hirsutum Gohir.D08G072800 D08 - View
Gossypium hirsutum Gohir.A12G002900 PF06200 - tify domain (tify) A12 - View
Gossypium hirsutum Gohir.D12G002600 PF06200 - tify domain (tify) D12 - View
Gossypium hirsutum Gohir.A08G064300 PF06200 - tify domain (tify) A08 - View
Glycine max Glyma.10G244400 PF06200//PF09425 - tify domain (tify) // Divergent CCT motif (CCT_2) Gm10 - View
Gossypium raimondii Gorai.008G002400 Chr08 - View
Gossypium raimondii Gorai.004G077100 Chr04 - View
Lotus japonicus Lj5g0008364 PF06200//PF09425 - tify domain (tify) // Divergent CCT motif (CCT_2) chr5 + View
Lonicera japonica Lj2C1166G12 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_5_185821 PF06200//PF09425 - tify domain (tify) // Divergent CCT motif (CCT_2) Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_8_94021 PF06200//PF09425 - tify domain (tify) // Divergent CCT motif (CCT_2) Lsat_1_v8_lg_8 - View
Malus domestica MD16G1199200 TIFY domain/Divergent CCT motif family protein Chr16 + View
Malus domestica MD13G1199500 TIFY domain/Divergent CCT motif family protein Chr13 + View
Manihot esculenta Manes.03G173500 Chromosome03 + View
Manihot esculenta Manes.05G081400 Chromosome05 + View
Manihot esculenta Manes.15G032500 Chromosome15 - View
Medicago truncatula Medtr1g102900 divergent CCT motif protein chr1 - View
Nelumbo nucifera Nn1g02445 chr1 + View
Nelumbo nucifera Nn6g34159 chr6 + View
Nicotiana tabacum Nitab4.5_0001044g0010 Tify, CO/COL/TOC1, conserved site Nitab4.5_0001044 + View
Petunia axillaris Peaxi162Scf00230g00029 TIFY domain/Divergent CCT motif family protein Peaxi162Scf00230 - View
Punica granatum PGR004G2239 NC_045131.1 + View
Prunus persica Prupe.1G020900 PF09425 - Divergent CCT motif (CCT_2) Pp01 + View
Populus trichocarpa Potri.005G214300 PF06200 - tify domain (tify) Chr05 + View
Populus trichocarpa Potri.002G048500 PF06200//PF09425 - tify domain (tify) // Divergent CCT motif (CCT_2) Chr02 - View
Phaseolus vulgaris Phvul.007G061400 PF09425 - Divergent CCT motif (CCT_2) Chr07 + View
Quercus lobata QL06p001136 6 - View
Rhododendron simsii Rhsim13G0028400 chr13 + View
Salvia bowleyana SalBow4G2540 GWHASIU00000008 - View
Salix brachista Sabra05G0163800 GWHAAZH00000005 + View
Salix brachista Sabra02G0039600 GWHAAZH00000002 - View
Simmondsia chinensis Sc13g0004740 GWHAASQ00000013 + View
Sechium edule Sed0027490 LG04 + View
Solanum lycopersicum Solyc06g084120.4 Jasmonate ZIM domain protein k.1 (AHRD V3.3 *** I3WTA8_NICAT) SL4.0ch06 - View
Solanum lycopersicum Solyc09g065630.3 Tify domain-containing protein/CCT_2 domain-containing protein (AHRD V3.3 *** A0A1Q3D4M6_CEPFO) SL4.0ch09 + View
Schrenkiella parvula Sp7g12820 PF09425 - Divergent CCT motif (CCT_2) ch7-4 - View
Solanum pennellii Sopen09g027380 PPD2 (and its paralog, PPD1) encode plant-specific putative DNA-binding proteins. Deletion of the PPD locus increases leaf lamina size and results in dome-shaped rather than flat leaves. Siliques are also altered in shape because of extra lamina growth. | TIFY domain/Divergent CCT motif family protein | CONTAINS InterPro DOMAIN/s: Tify , Acireductone dioxygenase, ARD , CCT domain-like | BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein Spenn-ch09 + View
Solanum pennellii Sopen06g035500 PPD1 (and its paralog, PPD2) encode plant-specific putative DNA-binding proteins. PPD1 and PPD2 are not found in grasses. Overexpression of PPD reduces lamina size by promoting the early arrest of dispersed meristematic cells DMC proliferation during leaf and silique development. Deletion of the PPD locus increases leaf lamina size and results in dome-shaped rather than flat leaves. Siliques are also altered in shape because of extra lamina growth. The curvature of a deltappd leaf reflects the difference between excess growth of the lamina and a limitation to the extension capacity of its perimeter. | TIFY4A | CONTAINS InterPro DOMAIN/s: Tify , Acireductone dioxygenase, ARD , CCT domain-like | BEST Arabidopsis thaliana protein match is: TIFY domain/Divergent CCT motif family protein Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG401020059 Protein TIFY 4B ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400019346 Protein TIFY 4B ST4.03ch09 + View
Trochodendron aralioides TAR636G3033 group1 - View
Trochodendron aralioides TAR362G0460 group17 + View
Theobroma cacao Thecc.04G238200 TIFY domain/Divergent CCT motif family protein Chromosome_4 + View
Theobroma cacao Thecc.01G272300 TIFY domain/Divergent CCT motif family protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104808573 protein TIFY 4B-like isoform X1 NW_010964923.1 + View
Tripterygium wilfordii TWI73G0832 NC_052232.1 + View
Tripterygium wilfordii TWI53G0950 NC_052244.1 - View
Utricularia gibba unitig_0.g136 unitig_0 + View
Vaccinium macrocarpon vmacro02609 Similar to TIFY4B: Protein TIFY 4B (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G0668 CM024071.1 - View
Vitis vinifera GSVIVG01018038001 chr5 + View