Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold205G41712 scaffold205 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G10660 LG-4 - View
Aethionema arabicum Aa31LG7G7780 LG-7 - View
Aethionema arabicum Aa31LG9G1380 LG-9 - View
Acer truncatum Atru.chr9.2433 chr9 + View
Acer truncatum Atru.chr6.2182 chr6 + View
Acer truncatum Atru.chr11.1994 chr11 + View
Actinidia chinensis Actinidia06031 Lachesis_group11 + View
Arabidopsis lyrata AL7G49740 scaffold_7 - View
Avicennia marina MSTRG.3303 ScioBoG_102836_HRSCAF_103072 + View
Avicennia marina MSTRG.23998 ScioBoG_3895_HRSCAF_3912 + View
Avicennia marina MSTRG.15505 ScioBoG_19538_HRSCAF_19626 + View
Aquilegia oxysepala Aqoxy3G02995 CHR03 + View
Aquilegia oxysepala Aqoxy3G03045 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AYUG02 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9RBM2G PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 arahy.Tifrunner.gnm1.Arahy.06 - View
Arabidopsis thaliana AT5G40250 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G23980.1)%3B Has 9426 Blast hits to 9402 proteins in 296 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2235%3B Fungi - 712%3B Plants - 5071%3B Viruses - 76%3B Other Eukaryotes - 1332 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT1G23980 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G40250.1)%3B Has 9283 Blast hits to 9263 proteins in 297 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2141%3B Fungi - 689%3B Plants - 5036%3B Viruses - 72%3B Other Eukaryotes - 1339 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC05g26294 ChrC05 - View
Brassica carinata BcaB06g27465 ChrB06 + View
Brassica napus A04p13170 A04 + View
Brassica napus A09p40920 A09 + View
Brassica napus C05p23100 C05 - View
Brassica napus C04p46900 C04 + View
Brassica oleracea BolC4t26284H C4 + View
Brassica oleracea BolC5t31009H C5 - View
Brassica rapa BraA04t16976Z A04 + View
Brassica rapa BraA09t39582Z A09 + View
Beta vulgaris EL10Ac5g10775 PTHR14155//PTHR14155:SF103 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr5_EL10_PGA_scaffold2 + View
Beta vulgaris EL10Ac6g13641 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Chr6_EL10_PGA_scaffold0 + View
Camellia sinensis var. sinensis CSS0032845 PREDICTED: RING-H2 finger protein ATL46-like [Fragaria vesca subsp. vesca] Chr1 + View
Camellia sinensis var. sinensis CSS0012672 PREDICTED: RING-H2 finger protein ATL56-like [Vitis vinifera] Chr2 + View
Cannabis sativa CANSAT64G2090 NC_044379.1 + View
Cicer arietinum L. Ca_04211_v3 Ca_LG2_v3 - View
Corylus avellana Haze_07485 Similar to ATL46: RING-H2 finger protein ATL46 (Arabidopsis thaliana OX%3D3702) 4 + View
Corylus avellana Haze_12152 Similar to ATL46: RING-H2 finger protein ATL46 (Arabidopsis thaliana OX%3D3702) 9 - View
Corylus avellana Haze_14652 Similar to ATL46: RING-H2 finger protein ATL46 (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc07_g02360 Uncharacterized protein chr7 + View
Citrus clementina Ciclev10024093m.g scaffold_3 + View
Citrus clementina Ciclev10031917m.g scaffold_4 - View
Citrus clementina Ciclev10015556m.g scaffold_2 + View
Carpinus fangiana Cfa009114 Cfa03 - View
Cardamine hirsuta CARHR261850 Ring finger protein, putative Chr8 - View
Cardamine hirsuta CARHR024310 Ring finger protein, putative Chr1 - View
Carya illinoinensis CiPaw.03G036200 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Chr03 + View
Carya illinoinensis CiPaw.04G023700 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Chr04 + View
Citrullus lanatus ClCG01G014020 Ring finger protein, putative CG_Chr01 - View
Citrullus lanatus ClCG05G025170 Ring finger protein, putative CG_Chr05 + View
Citrullus lanatus ClCG09G018810 Ring finger protein, putative CG_Chr09 + View
Cucumis melo MELO3C021528.2 RING-H2 finger protein ATL46 chr09 + View
Cucumis melo MELO3C012012.2 RING-H2 finger protein ATL46 chr10 + View
Cucumis melo MELO3C002255.2 RING-H2 finger protein ATL80 chr12 + View
Capsella rubella Carub.0007s3538 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 scaffold_7 - View
Capsella rubella Carub.0001s2340 scaffold_1 - View
Cucumis sativus L. CsaV3_5G031720 RING-H2 finger protein ATL46 chr5 - View
Cucumis sativus L. CsaV3_5G037320 RING-H2 finger protein ATL46 chr5 - View
Cucumis sativus L. CsaV3_1G008330 RING-H2 finger protein ATL46-like chr1 + View
Daucus carota DCAR_007097 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_015036 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_021674 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv33509 GWHABJS00000014 - View
Davidia involucrata Dinv20679 GWHABJS00000006 + View
Davidia involucrata Dinv24885 GWHABJS00000018 - View
Durio zibethinus Duzib268G1014 NW_019168270.1 + View
Durio zibethinus Duzib187G0392 NW_019167860.1 + View
Durio zibethinus Duzib084G0406 NW_019167827.1 + View
Durio zibethinus Duzib147G0051 NW_019168470.1 + View
Durio zibethinus Duzib251G0313 NW_019167971.1 + View
Erigeron canadensis ECA238G2326 Conyza_canadensis_scaffold:6 - View
Erigeron canadensis ECA246G5269 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.I01819 Chr09 + View
Eucalyptus grandis Eucgr.B00353 Chr02 + View
Eucalyptus grandis Eucgr.J02181 Chr10 + View
Erythranthe guttata Migut.E00151 scaffold_5 + View
Erythranthe guttata Migut.I00027 scaffold_9 + View
Erythranthe guttata Migut.H00134 scaffold_8 + View
Eutrema salsugineum Thhalv10007961m.g PTHR14155:SF123 - RING-H2 FINGER PROTEIN ATL47 scaffold_5 + View
Eutrema salsugineum Thhalv10028349m.g PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 scaffold_14 - View
Fragaria x ananassa FAN14G1504 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Fvb6-1 - View
Fragaria x ananassa FAN04G2428 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Fvb5-4 + View
Fragaria x ananassa FAN22G2060 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 Fvb4-1 - View
Fragaria x ananassa FAN09G4873 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Fvb6-2 - View
Fragaria x ananassa FAN18G2011 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Fvb5-1 + View
Fragaria x ananassa FAN02G3576 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 Fvb6-4 + View
Fragaria x ananassa FAN05G0519 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 Fvb6-3 - View
Fragaria x ananassa FAN13G0179 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 Fvb5-2 + View
Fragaria x ananassa FAN08G2608 PTHR14155//PTHR14155:SF103 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb5-3 + View
Fragaria x ananassa FAN18G3247 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 Fvb5-1 - View
Fragaria vesca FvH4_6g50460 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Fvb6 + View
Fragaria vesca FvH4_5g05060 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 Fvb5 + View
Fragaria vesca FvH4_4g34840 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Fvb4 - View
Gossypium hirsutum Gohir.D09G024900 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 D09 + View
Gossypium hirsutum Gohir.A09G025500 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 A09 + View
Gossypium hirsutum Gohir.D07G225800 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 D07 + View
Gossypium hirsutum Gohir.A07G218900 PTHR14155//PTHR14155:SF128 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL46 A07 + View
Gossypium hirsutum Gohir.A03G141100 PTHR14155:SF123 - RING-H2 FINGER PROTEIN ATL47 A03 - View
Gossypium hirsutum Gohir.D02G164000 PTHR14155:SF123 - RING-H2 FINGER PROTEIN ATL47 D02 - View
Glycine max Glyma.13G170300 PTHR14155//PTHR14155:SF103 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm13 + View
Glycine max Glyma.04G181300 PTHR14155//PTHR14155:SF103 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm04 - View
Glycine max Glyma.05G035800 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Gm05 + View
Glycine max Glyma.13G071600 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Gm13 + View
Glycine max Glyma.17G091600 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Gm17 - View
Glycine max Glyma.19G010400 PTHR14155//PTHR14155:SF103 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm19 + View
Gossypium raimondii Gorai.001G260700 Chr01 + View
Gossypium raimondii Gorai.006G029000 Chr06 + View
Gossypium raimondii Gorai.005G184000 Chr05 - View
Helianthus annuus HanXRQChr09g0265971 Probable RING/U-box superfamily protein HanXRQChr09 - View
Lupinus albus Lalb_Chr21g0319351 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Lalb_Chr21 + View
Lotus japonicus Lj2g0007273 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 chr2 + View
Lotus japonicus Lj1g0023595 PTHR14155//PTHR14155:SF159 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED chr1 + View
Lotus japonicus Lj4g0023917 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 chr4 + View
Lonicera japonica Lj6P802T25 GWHAAZE00000006 + View
Lonicera japonica Lj7P589T34 GWHAAZE00000007 + View
Lonicera japonica Lju41C33T5 GWHAAZE00000094 + View
Lonicera japonica Lj5P122T38 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_4_181561 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_4_74941 PTHR14155//PTHR14155:SF103 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_2_92520 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_4_7081 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Lsat_1_v8_lg_4 + View
Malus domestica MD17G1035700 RING/U-box superfamily protein Chr17 + View
Malus domestica MD09G1036200 RING/U-box superfamily protein Chr09 - View
Malus domestica MD06G1176900 RING/U-box superfamily protein Chr06 + View
Manihot esculenta Manes.06G102400 Chromosome06 + View
Manihot esculenta Manes.15G181000 Chromosome15 + View
Medicago truncatula Medtr4g106680 RING-H2 finger protein ATL47 chr4 - View
Nelumbo nucifera Nn4g22848 chr4 - View
Nelumbo nucifera Nn3g16909 chr3 + View
Nicotiana tabacum Nitab4.5_0001952g0090 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0001952 - View
Olea europaea Oeu062368.1 chr18 - View
Petunia axillaris Peaxi162Scf00129g00092 RING/U-box superfamily protein Peaxi162Scf00129 + View
Punica granatum PGR142G2471 NC_045128.1 + View
Punica granatum PGR083G0977 NC_045133.1 + View
Punica granatum PGR119G1787 NC_045132.1 + View
Prunus persica Prupe.3G281500 Pp03 + View
Prunus persica Prupe.1G256600 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Pp01 - View
Pisum sativum Psat5g114200 Ring finger domain chr5LG3 - View
Pisum sativum Psat1g059080 Ring finger domain chr1LG6 - View
Papaver somniferum PSO063G2934 NC_039364.1 - View
Papaver somniferum PSO832G0618 NC_039367.1 - View
Populus trichocarpa Potri.015G073600 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Chr15 + View
Populus trichocarpa Potri.012G078200 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Chr12 + View
Phaseolus vulgaris Phvul.003G198400 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Chr03 + View
Phaseolus vulgaris Phvul.002G072700 PTHR14155:SF123 - RING-H2 FINGER PROTEIN ATL47 Chr02 - View
Quercus lobata QL02p076837 CM012294 + View
Quercus lobata QL03p061913 3 - View
Rosa chinensis RcHm_v2.0_Chr2g0170871 RcHm_v2.0_Chr2 + View
Rosa chinensis RcHm_v2.0_Chr7g0193811 RcHm_v2.0_Chr7 + View
Rosa chinensis RcHm_v2.0_Chr4g0444181 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim08G0055800 chr08 + View
Salix brachista Sabra15G0097700 GWHAAZH00000015 + View
Salix brachista Sabra12G0056000 GWHAAZH00000012 + View
Simmondsia chinensis Sc04g0001960 GWHAASQ00000004 - View
Sechium edule Sed0014718 LG03 - View
Sechium edule Sed0001756 LG11 - View
Sechium edule Sed0002756 LG01 + View
Sechium edule Sed0021295 LG06 + View
Sechium edule Sed0020353 LG04 - View
Solanum lycopersicum Solyc03g114090.1 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1N3Q0_ARTAN) SL4.0ch03 + View
Solanum lycopersicum Solyc02g067680.1 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1N3Q0_ARTAN) SL4.0ch02 + View
Solanum lycopersicum Solyc02g086950.1 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1N3Q0_ARTAN) SL4.0ch02 + View
Schrenkiella parvula Sp7g01700 PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 ch7-1 - View
Schrenkiella parvula Sp1g21260 PTHR14155//PTHR14155:SF123 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL47 ch1-1 - View
Solanum pennellii Sopen02g031720 hypothetical protein Spenn-ch02 + View
Solanum pennellii Sopen02g016790 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch02 + View
Solanum pennellii Sopen03g033150 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400038862 Ring finger protein ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400040994 Ring finger protein ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400042968 Ring finger protein ST4.03ch02 + View
Trochodendron aralioides TAR374G1247 group12 + View
Trochodendron aralioides TAR629G0606 group0 + View
Trochodendron aralioides TAR622G1145 group8 + View
Theobroma cacao Thecc.02G246300 RING/U-box superfamily protein Chromosome_2 - View
Theobroma cacao Thecc.04G006500 RING/U-box superfamily protein Chromosome_4 + View
Theobroma cacao Thecc.03G008000 RING/U-box superfamily protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104808918 RING-H2 finger protein ATL47-like NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104823915 RING-H2 finger protein ATL46 isoform X2 NW_010966881.1 - View
Tarenaya hassleriana THA.LOC104821067 RING-H2 finger protein ATL46-like NW_010966372.1 - View
Trifolium pratense TPR.G2310 Tp57577_TGAC_v2_LG2 + View
Trifolium pratense TPR.G37559 Tp57577_TGAC_v2_LG5 - View
Tripterygium wilfordii TWI12G1331 NC_052243.1 - View
Tripterygium wilfordii TWI18G0797 NC_052241.1 + View
Tripterygium wilfordii TWI56G0373 NC_052242.1 + View
Utricularia gibba unitig_746.g26569 unitig_746 + View
Vigna mungo VMungo1215G1744 CM024074.1 - View
Vigna mungo VMungo0464G1256 CM024077.1 + View
Vigna mungo VMungo1309G2215 CM024072.1 - View
Vigna mungo VMungo1383G3082 CM024070.1 + View
Vitis vinifera GSVIVG01007793001 chr17 + View