Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold75G24956 scaffold75 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G7170 LG-5 + View
Acer truncatum Atru.chr8.1993 chr8 - View
Acer truncatum Atru.chr3.3973 chr3 + View
Actinidia chinensis Actinidia23925 Lachesis_group9 - View
Actinidia chinensis Actinidia34421 Lachesis_group15 + View
Actinidia chinensis Actinidia05320 Lachesis_group20 - View
Actinidia chinensis Actinidia13153 Lachesis_group0 + View
Actinidia chinensis Actinidia26476 Lachesis_group17 - View
Arabidopsis lyrata AL4G23650 scaffold_4 - View
Avicennia marina MSTRG.5654 ScioBoG_102839_HRSCAF_103093 + View
Avicennia marina MSTRG.19076 ScioBoG_25048_HRSCAF_25167 + View
Amaranthus hybridus Ah.08g219760 AmaHy_arrow1_Scaffold_8 + View
Aquilegia oxysepala Aqoxy1G00907 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D17M73 PTHR23076//PTHR23076:SF69 - METALLOPROTEASE M41 FTSH // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WG1DZE PTHR23076//PTHR23076:SF69 - METALLOPROTEASE M41 FTSH // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YS6FHA PTHR23076//PTHR23076:SF69 - METALLOPROTEASE M41 FTSH // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0Y9XYY K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT2G29080 FTSH protease 3 encodes an FtsH protease that is localized to the mitochondrion FTSH protease 3 (ftsh3)%3B FUNCTIONS IN: ATP-dependent peptidase activity%2C ATPase activity%3B INVOLVED IN: proteolysis%2C protein catabolic process%3B LOCATED IN: mitochondrion%2C chloroplast thylakoid membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase M41%2C FtsH (InterPro:IPR005936)%2C ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ATPase%2C AAA-type%2C core (InterPro:IPR003959)%2C ATPase%2C AAA-type%2C conserved site (InterPro:IPR003960)%2C Peptidase M41 (InterPro:IPR000642)%2C Peptidase M41%2C FtsH extracellular (InterPro:IPR011546)%3B BEST Arabidopsis thaliana protein match is: FTSH protease 10 (TAIR:AT1G07510.1)%3B Has 42068 Blast hits to 39734 proteins in 3332 species: Archae - 1581%3B Bacteria - 17420%3B Metazoa - 4814%3B Fungi - 3774%3B Plants - 3280%3B Viruses - 30%3B Other Eukaryotes - 11169 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaC07g42473 ChrC07 + View
Brassica carinata BcaB02g10230 ChrB02 - View
Brassica carinata BcaB06g28273 ChrB06 - View
Brassica napus C04p21870 C04 + View
Brassica napus C04p58190 C04 - View
Brassica oleracea BolC4t27347H C4 - View
Brassica oleracea BolC4t23706H C4 + View
Brassica rapa BraA04t17773Z A04 - View
Beta vulgaris EL10Ac7g16046 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Chr7_EL10_PGA_scaffold5 - View
Camellia sinensis var. sinensis CSS0008560 PREDICTED: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial [Vitis vinifera] Chr11 - View
Camellia sinensis var. sinensis CSS0033381 PREDICTED: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial [Vitis vinifera] Chr4 - View
Camellia sinensis var. sinensis CSS0038960 PREDICTED: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial-like [Nicotiana tomentosiformis] Chr10 - View
Cicer arietinum L. Ca_19157_v3 Ca_LG6_v3 - View
Corylus avellana Haze_20815 Similar to FTSH10: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial (Arabidopsis thaliana OX%3D3702) 10 - View
Corylus avellana Haze_24129 Similar to FTSH10: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial (Arabidopsis thaliana OX%3D3702) 6 - View
Coffea canephora Cc01_g13140 ATP-dependent zinc metalloprotease FTSH 10, mitochondrial chr1 - View
Coffea canephora Cc06_g02500 ATP-dependent zinc metalloprotease FTSH 10, mitochondrial chr6 + View
Citrus clementina Ciclev10011087m.g scaffold_6 - View
Citrus clementina Ciclev10027837m.g scaffold_8 - View
Ceratophyllum demersum CDE02G0439 1 + View
Carpinus fangiana Cfa011524 Cfa04 - View
Cardamine hirsuta CARHR122360 ATP-dependent zinc metalloprotease FtsH Chr4 - View
Carya illinoinensis CiPaw.10G146600 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Chr10 - View
Carya illinoinensis CiPaw.13G091400 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Chr13 + View
Carya illinoinensis CiPaw.14G067300 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Chr14 + View
Citrullus lanatus ClCG04G008090 ATP-dependent zinc metalloprotease FtsH CG_Chr04 + View
Citrullus lanatus ClCG02G020010 ATP-dependent zinc metalloprotease FtsH CG_Chr02 + View
Cucumis melo MELO3C035093.2 ATP-dependent zinc metalloprotease FTSH 10, mitochondrial chr11 - View
Cucumis melo MELO3C003139.2 ATP-dependent zinc metalloprotease FtsH chr08 - View
Corchorus olitorius COL.COLO4_14779 Peptidase M41 AWUE01015458.1 + View
Carica papaya Cpa.g.sc169.19 supercontig_169 + View
Carica papaya Cpa.g.sc81.117 supercontig_81 + View
Chenopodium quinoa AUR62009544 FTSH8: ATP-dependent zinc metalloprotease FTSH 8, mitochondrial C_Quinoa_Scaffold_2493 + View
Capsella rubella Carub.0004s1008 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) scaffold_4 - View
Cucumis sativus L. CsaV3_4G025100 ATP-dependent zinc metalloprotease FtsH chr4 - View
Cucumis sativus L. CsaV3_6G016700 ATP-dependent zinc metalloprotease FTSH protein chr6 + View
Davidia involucrata Dinv37160 GWHABJS00000021 - View
Davidia involucrata Dinv35584 GWHABJS00000015 + View
Davidia involucrata Dinv06262 GWHABJS00000007 - View
Durio zibethinus Duzib168G1631 NW_019168159.1 + View
Durio zibethinus Duzib150G0241 NW_019167882.1 - View
Durio zibethinus Duzib106G1009 NW_019168492.1 - View
Durio zibethinus Duzib093G1630 NW_019167937.1 - View
Erigeron canadensis ECA247G0932 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.B02323 Chr02 + View
Erythranthe guttata Migut.J00319 scaffold_10 + View
Eutrema salsugineum Thhalv10016261m.g K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) scaffold_10 - View
Eutrema salsugineum Thhalv10006814m.g K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) scaffold_5 - View
Fragaria x ananassa FAN09G3297 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Fvb6-2 - View
Fragaria x ananassa FAN16G3230 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Fvb3-3 - View
Fragaria x ananassa FAN14G1238 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Fvb6-1 - View
Fragaria x ananassa FAN21G0607 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Fvb3-2 - View
Fragaria x ananassa FAN05G5381 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Fvb6-3 - View
Fragaria x ananassa FAN02G2965 PF00004//PF01434//PF06480 - ATPase family associated with various cellular activities (AAA) (AAA) // Peptidase family M41 (Peptidase_M41) // FtsH Extracellular (FtsH_ext) Fvb6-4 - View
Fragaria x ananassa FAN11G3739 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Fvb3-4 + View
Fragaria vesca FvH4_6g13480 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Fvb6 + View
Fragaria vesca FvH4_3g36790 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Fvb3 - View
Gossypium hirsutum Gohir.D09G150500 PTHR23076//PTHR23076:SF69 - METALLOPROTEASE M41 FTSH // SUBFAMILY NOT NAMED D09 + View
Gossypium hirsutum Gohir.A09G154966 PTHR23076//PTHR23076:SF69 - METALLOPROTEASE M41 FTSH // SUBFAMILY NOT NAMED A09 + View
Gossypium hirsutum Gohir.D05G094700 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) D05 + View
Gossypium hirsutum Gohir.A01G221800 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) A01 + View
Gossypium hirsutum Gohir.D01G211400 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) D01 + View
Gossypium hirsutum Gohir.A05G094200 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) A05 + View
Glycine max Glyma.12G061200 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Gm12 + View
Glycine max Glyma.11G137700 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Gm11 + View
Gossypium raimondii Gorai.002G257200 Chr02 + View
Gossypium raimondii Gorai.006G171800 Chr06 + View
Gossypium raimondii Gorai.009G097900 Chr09 + View
Lupinus albus Lalb_Chr19g0137901 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Lalb_Chr19 - View
Lupinus albus Lalb_Chr01g0003541 PF00004//PF06480 - ATPase family associated with various cellular activities (AAA) (AAA) // FtsH Extracellular (FtsH_ext) Lalb_Chr01 + View
Lotus japonicus Lj3g0008176 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) chr3 + View
Lonicera japonica Lj2A1066T67 GWHAAZE00000002 - View
Lonicera japonica Lj2A93T82 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_9_23940 Lsat_1_v8_lg_9 + View
Magnolia biondii MBI14_g12126_MAGBIO AED:0.08 Chr14 - View
Magnolia biondii MBI05_g28373_MAGBIO AED:0.07 Chr05 - View
Malus domestica MD12G1144000 FTSH protease 10 Chr12 - View
Malus domestica MD04G1130900 FTSH protease 10 Chr04 - View
Manihot esculenta Manes.08G084431 Chromosome08 - View
Manihot esculenta Manes.09G092500 Chromosome09 - View
Nelumbo nucifera Nn2g11151 chr2 - View
Nelumbo nucifera Nn2g13391 chr2 - View
Nicotiana tabacum Nitab4.5_0000527g0220 AAA+ ATPase domain, P-loop containing nucleoside triphosphate hydrolase, ATPase, AAA-type, core, Peptidase M41, FtsH extracellular, Peptidase M41 Nitab4.5_0000527 + View
Nicotiana tabacum Nitab4.5_0000349g0340 Peptidase, FtsH, AAA+ ATPase domain, ATPase, AAA-type, conserved site, ATPase, AAA-type, core, Peptidase M41, P-loop containing nucleoside triphosphate hydrolase, Peptidase M41, FtsH extracellular Nitab4.5_0000349 - View
Nicotiana tabacum Nitab4.5_0000705g0160 Peptidase M41, P-loop containing nucleoside triphosphate hydrolase, Peptidase M41, FtsH extracellular, Peptidase, FtsH, ATPase, AAA-type, conserved site, ATPase, AAA-type, core, AAA+ ATPase domain Nitab4.5_0000705 + View
Olea europaea Oeu001862.1 chr20 + View
Olea europaea Oeu010097.3 chr9 - View
Oryza sativa ssp. japonica Os05g0458400 Similar to AAA-metalloprotease FtsH. chr05 + View
Oryza sativa ssp. japonica Os01g0842600 Similar to AAA-metalloprotease FtsH. chr01 - View
Petunia axillaris Peaxi162Scf00165g00821 ATP-dependent zinc metalloprotease FtsH Peaxi162Scf00165 + View
Petunia axillaris Peaxi162Scf00330g00620 ATP-dependent zinc metalloprotease FtsH Peaxi162Scf00330 - View
Punica granatum PGR102G0952 NC_045129.1 - View
Prunus persica Prupe.6G257400 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Pp06 - View
Papaver somniferum PSO339G6640 NC_039366.1 - View
Papaver somniferum PSO063G1802 NC_039364.1 - View
Populus trichocarpa Potri.009G033600 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Chr09 - View
Populus trichocarpa Potri.016G099800 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Chr16 - View
Phaseolus vulgaris Phvul.011G062800 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Chr11 + View
Quercus lobata QL07p048749 7 - View
Rosa chinensis RcHm_v2.0_Chr3g0466351 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim01G0230600 chr01 - View
Rhododendron simsii Rhsim04G0158400 chr04 - View
Salvia bowleyana SalBow2G2909 GWHASIU00000007 - View
Salix brachista Sabra09G0024000 GWHAAZH00000009 - View
Simmondsia chinensis Sc21g0005930 GWHAASQ00000021 - View
Simmondsia chinensis Sc12g0001330 GWHAASQ00000012 + View
Sechium edule Sed0016908 LG05 - View
Solanum lycopersicum Solyc10g086540.3 ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A317MD73_9BACT) SL4.0ch10 - View
Solanum lycopersicum Solyc09g010950.3 ATP-dependent zinc metalloprotease FTSH 3, mitochondrial (AHRD V3.3 *** A0A2G2VYB5_CAPBA) SL4.0ch09 - View
Schrenkiella parvula Sp1g06240 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) ch1-1 + View
Schrenkiella parvula Sp4g11900 K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) ch4-6 - View
Solanum pennellii Sopen09g005670 encodes an FtsH protease that is localized to the mitochondrion | FTSH protease 3 (ftsh3) | FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity | INVOLVED IN: proteolysis, protein catabolic process | LOCATED IN: mitochondrion, chloroplast thylakoid membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH , ATPase, AAA+ type, core , ATPase, AAA-type, core , ATPase, AAA-type, conserved site , Peptidase M41 , Peptidase M41, FtsH extracellular | BEST Arabidopsis thaliana protein match is: FTSH protease 10 Spenn-ch09 - View
Solanum pennellii Sopen10g035920 encodes an FtsH protease that is localized to the mitochondrion | FTSH protease 3 (ftsh3) | FUNCTIONS IN: ATP-dependent peptidase activity, ATPase activity | INVOLVED IN: proteolysis, protein catabolic process | LOCATED IN: mitochondrion, chloroplast thylakoid membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Peptidase M41, FtsH , ATPase, AAA+ type, core , ATPase, AAA-type, core , ATPase, AAA-type, conserved site , Peptidase M41 , Peptidase M41, FtsH extracellular | BEST Arabidopsis thaliana protein match is: FTSH protease 10 Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400008828 Mitochondrial respiratory chain complexes assembly protein AFG3 ST4.03ch09 + View
Selenicereus undatus Hund04937 Scaffold_19641 + View
Trochodendron aralioides TAR623G0999 group7 - View
Trochodendron aralioides TAR369G0431 group18 + View
Theobroma cacao Thecc.09G318500 FTSH protease 10 Chromosome_9 + View
Theobroma cacao Thecc.05G037300 Cell division protease ftsH Chromosome_5 + View
Tarenaya hassleriana THA.LOC104800676 ATP-dependent zinc metalloprotease FTSH 10%2C mitochondrial isoform X1 NW_010969548.1 - View
Tripterygium wilfordii TWI74G0890 NC_052234.1 + View
Tripterygium wilfordii TWI79G0215 NC_052238.1 + View
Tripterygium wilfordii TWI31G1224 NC_052233.1 + View
Vaccinium macrocarpon vmacro14548 Similar to FTSH10: ATP-dependent zinc metalloprotease FTSH 10, mitochondrial (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro03045 Similar to FTSH3: ATP-dependent zinc metalloprotease FTSH 3, mitochondrial (Oryza sativa subsp. japonica OX%3D39947) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1127G1333 CM024076.1 + View
Vitis vinifera GSVIVG01024927001 chr6 - View
Vitis vinifera GSVIVG01034150001 chr8 - View
Zea mays Zm00001eb351270 Zm00001e027233 ATP-dependent zinc metalloprotease FTSH 10 mitochondrial 8 + View