Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G16330 LG-4 - View
Actinidia chinensis Actinidia04888 Lachesis_group1 - View
Actinidia chinensis Actinidia37626 Lachesis_group13 - View
Arabidopsis lyrata AL8G39330 scaffold_8 - View
Avicennia marina MSTRG.9629 ScioBoG_12795_HRSCAF_12848 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.L6WE06 PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT5G62440 EMB514 (DUF3223) Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: nucleologenesis%2C regulation of cell division%2C embryo development%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 (InterPro:IPR021602)%3B Has 1122 Blast hits to 800 proteins in 144 species: Archae - 2%3B Bacteria - 150%3B Metazoa - 333%3B Fungi - 187%3B Plants - 279%3B Viruses - 3%3B Other Eukaryotes - 168 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB02g09647 ChrB02 - View
Brassica napus A06p29150 A06 - View
Beta vulgaris EL10Ac5g11021 PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 Chr5_EL10_PGA_scaffold2 + View
Capsicum annuum CAN.G628.1 PGAv.1.6.scaffold628 - View
Cicer arietinum L. Ca_21822_v3 Ca_LG7_v3 - View
Corylus avellana Haze_07324 Similar to EMB514: Protein EMBRYO DEFECTIVE 514 (Arabidopsis thaliana OX%3D3702) 4 - View
Carpinus fangiana Cfa018940 Cfa08 - View
Cardamine hirsuta CARHR276240 Protein of unknown function (DUF3223) Chr8 - View
Carya illinoinensis CiPaw.11G044800 PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 Chr11 + View
Citrullus lanatus ClCG06G016210 EMB514 CG_Chr06 - View
Cucumis melo MELO3C017173.2 DNA-directed RNA polymerase subunit chr02 - View
Chenopodium quinoa AUR62021675 Protein of unknown function C_Quinoa_Scaffold_1675 - View
Chenopodium quinoa AUR62008420 RKD1: Protein RKD1 C_Quinoa_Scaffold_3422 + View
Capsella rubella Carub.0008s2312 PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 scaffold_8 - View
Cucumis sativus L. CsaV3_1G002330 protein DCL, chloroplastic chr1 + View
Daucus carota DCAR_021520 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_016563 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv38714 GWHABJS00000019 - View
Davidia involucrata Dinv19966 GWHABJS00000006 - View
Durio zibethinus Duzib205G1944 NW_019168381.1 + View
Eucalyptus grandis Eucgr.B00508 Chr02 + View
Erythranthe guttata Migut.D01816 scaffold_4 - View
Fragaria x ananassa FAN08G2213 PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 Fvb5-3 + View
Fragaria x ananassa FAN18G4275 PTHR33415:SF3 - EMB514 Fvb5-1 - View
Gossypium hirsutum Gohir.D03G093300 PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 D03 + View
Gossypium hirsutum Gohir.A03G066800 PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 A03 + View
Glycine max Glyma.06G194200 PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 Gm06 + View
Glycine max Glyma.05G026600 PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 Gm05 + View
Glycine max Glyma.04G169200 PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 Gm04 - View
Gossypium raimondii Gorai.007G037600 Chr07 - View
Lupinus albus Lalb_Chr07g0178061 PTHR33415:SF3 - EMB514 Lalb_Chr07 + View
Lupinus albus Lalb_Chr08g0235721 PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 Lalb_Chr08 - View
Lotus japonicus Lj1g0000196 PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 chr1 + View
Lonicera japonica Lj5A110T129 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_1_13920 PTHR33415:SF3 - EMB514 Lsat_1_v8_lg_1 + View
Malus domestica MD14G1200600 Protein of unknown function (DUF3223) Chr14 + View
Malus domestica MD06G1193500 Protein of unknown function (DUF3223) Chr06 + View
Manihot esculenta Manes.06G092100 Chromosome06 - View
Petunia axillaris Peaxi162Scf00013g00333 conserved hypothetical protein Peaxi162Scf00013 + View
Punica granatum PGR083G2029 NC_045133.1 + View
Prunus persica Prupe.5G193800 PTHR33415:SF3 - EMB514 Pp05 + View
Phaseolus vulgaris Phvul.003G190000 PTHR33415:SF3 - EMB514 Chr03 - View
Phaseolus vulgaris Phvul.009G187000 PTHR33415:SF3 - EMB514 Chr09 - View
Quercus lobata QL10p017042 10 + View
Rosa chinensis RcHm_v2.0_Chr7g0181461 RcHm_v2.0_Chr7 + View
Salvia bowleyana SalBow7G0736 GWHASIU00000005 - View
Simmondsia chinensis Sc04g0002660 GWHAASQ00000004 + View
Simmondsia chinensis Sc12g0006380 GWHAASQ00000012 - View
Sechium edule Sed0006743 LG08 + View
Solanum lycopersicum Solyc06g069770.3 protein DCL, chloroplastic (AHRD V3.3 *** A0A2I4F4M4_9ROSI) SL4.0ch06 - View
Solanum lycopersicum Solyc03g116020.3 DNA-directed RNA polymerase subunit (AHRD V3.3 *-* A0A1Q3CGP2_CEPFO) SL4.0ch03 - View
Schrenkiella parvula Sp2g25630 PTHR33415//PTHR33415:SF3 - FAMILY NOT NAMED // EMB514 ch2-4 - View
Solanum pennellii Sopen06g027060 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: nucleologenesis, regulation of cell division, embryo development | LOCATED IN: nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 Spenn-ch06 - View
Solanum pennellii Sopen03g035010 Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division. | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: nucleologenesis, regulation of cell division, embryo development | LOCATED IN: nucleus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3223 Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400033045 EMB514 ST4.03ch06 - View
Solanum tuberosum PGSC0003DMG400019531 EMB514 ST4.03ch03 - View
Selenicereus undatus Hund02648 Scaffold_33678 - View
Trochodendron aralioides TAR622G0407 group8 - View
Tripterygium wilfordii TWI81G0244 NC_052251.1 + View
Vigna mungo VMungo1215G2263 CM024074.1 + View
Vigna mungo VMungo1309G1081 CM024072.1 + View
Vitis vinifera GSVIVG01007999001 chr17 + View