Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold144G35927 scaffold144 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G8950 LG-3 + View
Actinidia chinensis Actinidia28353 Lachesis_group23 - View
Actinidia chinensis Actinidia14587 Lachesis_group6 - View
Arabidopsis lyrata AL4G45270 scaffold_4 + View
Avicennia marina MSTRG.1846 ScioBoG_102834_HRSCAF_103055 - View
Avicennia marina MSTRG.25618 ScioBoG_4119_HRSCAF_4138 + View
Amaranthus hybridus Ah.12g051820 Pentatricopeptide repeat-containing protein At4g21300 AmaHy_arrow1_Scaffold_12 + View
Arabidopsis thaliana AT2G46050 Pentatricopeptide repeat (PPR-like) superfamily protein Pentatricopeptide repeat (PPR-like) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G68930.1)%3B Has 38266 Blast hits to 13184 proteins in 176 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 22%3B Fungi - 35%3B Plants - 37737%3B Viruses - 0%3B Other Eukaryotes - 472 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB03g12318 ChrB03 + View
Brassica napus A01p10190 A01 - View
Camellia sinensis var. sinensis CSS0041078 hypothetical protein CICLE_v10031197mg [Citrus clementina] Chr7 + View
Camellia sinensis var. sinensis CSS0046235 PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Vitis vinifera] Chr14 + View
Capsicum annuum CAN.G532.96 PGAv.1.6.scaffold532 + View
Ceratophyllum demersum CDE10G1140 8 - View
Cardamine hirsuta CARHR141320 Pentatricopeptide repeat-containing protein Chr4 + View
Carya illinoinensis CiPaw.03G146600 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr03 - View
Capsella rubella Carub.0004s2874 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_4 + View
Capsella rubella Carub.0004s0157 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_4 + View
Daucus carota DCAR_006834 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv38906 GWHABJS00000003 - View
Eucalyptus grandis Eucgr.E00741 Chr05 - View
Eutrema salsugineum Thhalv10001720m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_22 + View
Fragaria x ananassa FAN23G0875 PF01535 - PPR repeat (PPR) Fvb1-3 - View
Gossypium hirsutum Gohir.A08G115000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A08 - View
Gossypium hirsutum Gohir.D08G135300 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D08 - View
Gossypium hirsutum Gohir.D12G233000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D12 + View
Gossypium hirsutum Gohir.A12G234300 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A12 + View
Gossypium raimondii Gorai.008G249400 Chr08 + View
Gossypium raimondii Gorai.004G138500 Chr04 - View
Lupinus albus Lalb_Chr16g0377351 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Lalb_Chr16 - View
Lonicera japonica Lj2P180T48 GWHAAZE00000002 - View
Lonicera japonica Lj8C216T17 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_3_9041 PF01535 - PPR repeat (PPR) Lsat_1_v8_lg_3 + View
Magnolia biondii MBI05_g34308_MAGBIO AED:0.20 Chr05 - View
Medicago truncatula Medtr3g063220 PPR containing plant-like protein chr3 - View
Petunia axillaris Peaxi162Scf00117g01732 Pentatricopeptide repeat (PPR) superfamily protein Peaxi162Scf00117 + View
Punica granatum PGR042G1425 NC_045130.1 - View
Prunus persica Prupe.5G104800 Pp05 + View
Pisum sativum Psat7g031160 PPR repeat chr7LG7 - View
Populus trichocarpa Potri.012G006700 K03626 - nascent polypeptide-associated complex subunit alpha (EGD2, NACA) Chr12 + View
Populus trichocarpa Potri.001G100600 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr01 - View
Quercus lobata QL12p032072 12 - View
Rhododendron simsii Rhsim02G0235000 chr02 + View
Rhododendron simsii Rhsim10G0167300 chr10 - View
Salvia bowleyana SalBow8G1533 GWHASIU00000004 - View
Salix brachista Sabra01G0075500 GWHAAZH00000001 - View
Simmondsia chinensis Sc22g0005380 GWHAASQ00000022 - View
Solanum lycopersicum Solyc01g095160.3 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3DBJ5_CAPCH) SL4.0ch01 + View
Schrenkiella parvula Sp4g28110 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch4-6 + View
Selenicereus undatus Hund26988 Scaffold_2055 + View
Tarenaya hassleriana THA.LOC104819273 pentatricopeptide repeat-containing protein At3g49740 NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104809371 pentatricopeptide repeat-containing protein At3g53360%2C mitochondrial-like NW_010965019.1 - View
Trifolium pratense TPR.G24366 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI74G0840 NC_052234.1 + View
Vitis vinifera GSVIVG01027001001 chr15 + View