Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold173G39128 scaffold173 - View
SGA_v2.0_scaffold144G35895 scaffold144 - View
SGA_v2.0_scaffold192G40613 scaffold192 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G1140 LG-2 + View
Acer truncatum Atru.chr5.569 chr5 + View
Acer truncatum Atru.chr8.48 chr8 + View
Acer truncatum Atru.chr9.2098 chr9 - View
Actinidia chinensis Actinidia20167 Lachesis_group6 + View
Actinidia chinensis Actinidia10616 Lachesis_group6 - View
Actinidia chinensis Actinidia28334 Lachesis_group23 - View
Arabidopsis lyrata AL2G10990 scaffold_2 - View
Arabidopsis lyrata AL4G45400 scaffold_4 + View
Avicennia marina MSTRG.8695 ScioBoG_11560_HRSCAF_11609 - View
Avicennia marina MSTRG.1835 ScioBoG_102834_HRSCAF_103055 - View
Avicennia marina MSTRG.25638 ScioBoG_4119_HRSCAF_4138 + View
Avicennia marina MSTRG.13865 ScioBoG_18778_HRSCAF_18863 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5VQ3WA arahy.Tifrunner.gnm1.Arahy.05 - View
Arabidopsis thaliana AT2G46150 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein%2C group 2 (InterPro:IPR004864)%3B BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT1G64065.1)%3B Has 262 Blast hits to 261 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 4%3B Plants - 258%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT1G64065 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family%3B CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein%2C group 2 (InterPro:IPR004864)%3B BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT2G46150.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC02g12710 ChrC02 - View
Brassica carinata BcaB07g31431 ChrB07 + View
Brassica carinata BcaC04g22528 ChrC04 + View
Brassica napus A05p01660 A05 - View
Brassica napus A09p15020 A09 - View
Brassica rapa BraA09t37147Z A09 - View
Camellia sinensis var. sinensis CSS0041380 PREDICTED: uncharacterized protein LOC104593459 [Nelumbo nucifera] Chr14 + View
Camellia sinensis var. sinensis CSS0011187 unnamed protein product [Coffea canephora] Chr12 + View
Camellia sinensis var. sinensis CSS0020046 PREDICTED: uncharacterized protein LOC104600248 [Nelumbo nucifera] Chr3 + View
Capsicum annuum CAN.G532.74 PGAv.1.6.scaffold532 - View
Capsicum annuum CAN.G792.72 PGAv.1.6.scaffold792 - View
Capsicum annuum CAN.G78.133 PGAv.1.6.scaffold78 + View
Cannabis sativa CANSAT21G2155 NC_044374.1 + View
Corylus avellana Haze_00073 Similar to At1g64065: Late embryogenesis abundant protein At1g64065 (Arabidopsis thaliana OX%3D3702) 1 + View
Corylus avellana Haze_08736 Similar to At1g64065: Late embryogenesis abundant protein At1g64065 (Arabidopsis thaliana OX%3D3702) 4 - View
Corylus avellana Haze_15570 Similar to At1g64065: Late embryogenesis abundant protein At1g64065 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc08_g15370 Putative Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family chr8 + View
Citrus clementina Ciclev10023484m.g scaffold_3 - View
Ceratophyllum demersum CDE07G1919 5 - View
Carpinus fangiana Cfa016319 Cfa06 + View
Carpinus fangiana Cfa012256 Cfa05 + View
Carpinus fangiana Cfa003865 Cfa01 - View
Cardamine hirsuta CARHR141430 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chr4 + View
Cardamine hirsuta CARHR046870 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chr2 - View
Carya illinoinensis CiPaw.05G260600 PF03168 - Late embryogenesis abundant protein (LEA_2) Chr05 - View
Carya illinoinensis CiPaw.02G035800 PTHR31852:SF6 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Chr02 + View
Carya illinoinensis CiPaw.11G128100 PF03168 - Late embryogenesis abundant protein (LEA_2) Chr11 - View
Carya illinoinensis CiPaw.01G068400 PTHR31852:SF6 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Chr01 + View
Carya illinoinensis CiPaw.12G087900 PF03168 - Late embryogenesis abundant protein (LEA_2) Chr12 - View
Citrullus lanatus ClCG01G002260 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family LENGTH=221 CG_Chr01 - View
Cucumis melo MELO3C005720.2 Late embryogenesis abundant protein chr09 + View
Corchorus olitorius COL.COLO4_08341 Late embryogenesis abundant protein%2C LEA-14 AWUE01013721.1 - View
Capsella rubella Carub.0002s0073 PTHR31234:SF4 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN scaffold_2 - View
Capsella rubella Carub.0004s2883 PTHR31852//PTHR31852:SF6 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN scaffold_4 + View
Cucumis sativus L. CsaV3_5G002330 Late embryogenesis abundant protein chr5 - View
Daucus carota DCAR_005576 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_020284 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv35285 GWHABJS00000009 - View
Davidia involucrata Dinv32525 GWHABJS00000020 + View
Davidia involucrata Dinv37580 GWHABJS00000017 - View
Davidia involucrata Dinv43868 GWHABJS00000016 + View
Davidia involucrata Dinv28366 GWHABJS00000004 - View
Durio zibethinus Duzib205G1643 NW_019168381.1 + View
Durio zibethinus Duzib084G0188 NW_019167827.1 + View
Durio zibethinus Duzib084G0687 NW_019167827.1 - View
Durio zibethinus Duzib068G1221 NW_019167838.1 - View
Durio zibethinus Duzib068G1459 NW_019167838.1 + View
Durio zibethinus Duzib138G1387 NW_019167893.1 + View
Durio zibethinus Duzib205G0667 NW_019168381.1 + View
Erigeron canadensis ECA240G4088 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.E00787 Chr05 + View
Eucalyptus grandis Eucgr.D01803 Chr04 - View
Erythranthe guttata Migut.F00267 scaffold_6 - View
Erythranthe guttata Migut.E01213 scaffold_5 + View
Erythranthe guttata Migut.A00711 scaffold_1 - View
Eutrema salsugineum Thhalv10023687m.g scaffold_8 - View
Eutrema salsugineum Thhalv10001755m.g PTHR31852:SF6 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN scaffold_22 + View
Fragaria x ananassa FAN01G0320 PF03168 - Late embryogenesis abundant protein (LEA_2) Fvb7-4 - View
Fragaria x ananassa FAN04G0623 PTHR11005//PTHR11005:SF41 - LYSOSOMAL ACID LIPASE-RELATED // SUBFAMILY NOT NAMED Fvb5-4 - View
Fragaria x ananassa FAN06G1088 PF03168 - Late embryogenesis abundant protein (LEA_2) Fvb7-2 + View
Fragaria x ananassa FAN13G1848 PF03168 - Late embryogenesis abundant protein (LEA_2) Fvb5-2 + View
Fragaria x ananassa FAN10G3999 PF03168 - Late embryogenesis abundant protein (LEA_2) Fvb7-1 + View
Fragaria x ananassa FAN06G3503 PF03168 - Late embryogenesis abundant protein (LEA_2) Fvb7-2 + View
Fragaria x ananassa FAN04G0101 PTHR11005//PTHR11005:SF41 - LYSOSOMAL ACID LIPASE-RELATED // SUBFAMILY NOT NAMED Fvb5-4 + View
Fragaria x ananassa FAN13G3082 PTHR11005//PTHR11005:SF41 - LYSOSOMAL ACID LIPASE-RELATED // SUBFAMILY NOT NAMED Fvb5-2 + View
Fragaria x ananassa FAN10G0724 PF03168 - Late embryogenesis abundant protein (LEA_2) Fvb7-1 + View
Fragaria x ananassa FAN08G2247 PTHR11005//PTHR11005:SF41 - LYSOSOMAL ACID LIPASE-RELATED // SUBFAMILY NOT NAMED Fvb5-3 - View
Fragaria vesca FvH4_7g30550 PF03168 - Late embryogenesis abundant protein (LEA_2) Fvb7 + View
Fragaria vesca FvH4_5g03230 K01052 - lysosomal acid lipase/cholesteryl ester hydrolase (LIPA) Fvb5 + View
Fragaria vesca FvH4_7g15480 PF03168 - Late embryogenesis abundant protein (LEA_2) Fvb7 + View
Gossypium hirsutum Gohir.A12G252700 PF03168 - Late embryogenesis abundant protein (LEA_2) A12 - View
Gossypium hirsutum Gohir.A02G104600 PF03168 - Late embryogenesis abundant protein (LEA_2) A02 - View
Gossypium hirsutum Gohir.D12G255350 PF03168 - Late embryogenesis abundant protein (LEA_2) D12 - View
Gossypium hirsutum Gohir.D11G097500 PTHR31852//PTHR31852:SF6 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN D11 + View
Gossypium hirsutum Gohir.D08G134000 PF03168 - Late embryogenesis abundant protein (LEA_2) D08 - View
Gossypium hirsutum Gohir.D12G234300 PF03168 - Late embryogenesis abundant protein (LEA_2) D12 + View
Gossypium hirsutum Gohir.A08G113200 PF03168 - Late embryogenesis abundant protein (LEA_2) A08 - View
Gossypium hirsutum Gohir.A12G233000 PF03168 - Late embryogenesis abundant protein (LEA_2) A12 + View
Gossypium hirsutum Gohir.A11G092700 PTHR31852//PTHR31852:SF6 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN A11 + View
Gossypium hirsutum Gohir.D03G079100 PF03168 - Late embryogenesis abundant protein (LEA_2) D03 + View
Glycine max Glyma.16G031000 PTHR31852//PTHR31852:SF6 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Gm16 - View
Glycine max Glyma.05G212600 PF03168 - Late embryogenesis abundant protein (LEA_2) Gm05 + View
Glycine max Glyma.01G222800 PF03168 - Late embryogenesis abundant protein (LEA_2) Gm01 + View
Glycine max Glyma.11G020500 PF03168 - Late embryogenesis abundant protein (LEA_2) Gm11 - View
Glycine max Glyma.08G019000 PF03168 - Late embryogenesis abundant protein (LEA_2) Gm08 + View
Gossypium raimondii Gorai.004G137100 Chr04 - View
Gossypium raimondii Gorai.007G103800 Chr07 + View
Gossypium raimondii Gorai.008G273100 Chr08 - View
Gossypium raimondii Gorai.003G084900 Chr03 - View
Gossypium raimondii Gorai.008G250600 Chr08 + View
Hydrangea macrophylla Hma1.2p1_0216F.1_g091190 Hma1.2p1_0216F.1 + View
Hydrangea macrophylla Hma1.2p1_0142F.1_g064460 Hma1.2p1_0142F.1 - View
Lupinus albus Lalb_Chr09g0332831 PF03168 - Late embryogenesis abundant protein (LEA_2) Lalb_Chr09 - View
Lupinus albus Lalb_Chr09g0320761 PF03168 - Late embryogenesis abundant protein (LEA_2) Lalb_Chr09 - View
Lotus japonicus Lj4g0006078 PF03168 - Late embryogenesis abundant protein (LEA_2) chr4 - View
Lotus japonicus Lj3g0006203 PF12751 - Vacuolar segregation subunit 7 (Vac7) chr3 - View
Lotus japonicus LjContig00312_ERROPOS870357g0000103 PF03168 - Late embryogenesis abundant protein (LEA_2) Contig00312_ERROPOS870357 + View
Lonicera japonica Lj7P506T63 GWHAAZE00000007 - View
Lonicera japonica Lj1P1008T31 GWHAAZE00000001 + View
Lonicera japonica Lj2P176T20 GWHAAZE00000002 - View
Lonicera japonica Lj3A916T21 GWHAAZE00000003 - View
Lonicera japonica Lj2C55T1 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_6_84881 PF03168 - Late embryogenesis abundant protein (LEA_2) Lsat_1_v8_lg_6 - View
Malus domestica MD14G1113800 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chr14 + View
Malus domestica MD07G1281400 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chr07 + View
Malus domestica MD01G1210900 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chr01 + View
Malus domestica MD01G1072100 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chr01 + View
Manihot esculenta Manes.02G016000 Chromosome02 - View
Manihot esculenta Manes.06G154100 Chromosome06 + View
Manihot esculenta Manes.01G051530 Chromosome01 - View
Manihot esculenta Manes.01G251900 Chromosome01 - View
Manihot esculenta Manes.08G167100 Chromosome08 + View
Manihot esculenta Manes.05G028600 Chromosome05 - View
Medicago truncatula Medtr8g028475 late embryogenesis abundant protein chr8 - View
Medicago truncatula Medtr8g099035 late embryogenesis abundant protein chr8 + View
Medicago truncatula Medtr5g009910 late embryogenesis abundant protein chr5 - View
Nicotiana tabacum Nitab4.5_0000915g0070 Late embryogenesis abundant protein, LEA-14, Immunoglobulin-like fold Nitab4.5_0000915 - View
Olea europaea Oeu037138.1 chr11 - View
Olea europaea Oeu042367.1 chr13 + View
Oryza sativa ssp. japonica Os05g0584300 Harpin-induced 1 domain containing protein. chr05 + View
Petunia axillaris Peaxi162Scf00102g00168 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Peaxi162Scf00102 + View
Petunia axillaris Peaxi162Scf00020g00168 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Peaxi162Scf00020 + View
Petunia axillaris Peaxi162Scf00074g01629 Late embryogenesis abundant hydroxyproline-rich glycofamily protein, putative Peaxi162Scf00074 - View
Punica granatum PGR042G3547 NC_045130.1 + View
Punica granatum PGR031G0035 NC_045127.1 - View
Punica granatum PGR031G0945 NC_045127.1 + View
Prunus persica Prupe.2G178400 PF03168 - Late embryogenesis abundant protein (LEA_2) Pp02 + View
Prunus persica Prupe.5G107500 Pp05 + View
Prunus persica Prupe.2G303200 PF03168 - Late embryogenesis abundant protein (LEA_2) Pp02 + View
Pisum sativum Psat7g028800 Late embryogenesis abundant protein chr7LG7 + View
Populus trichocarpa Potri.001G098100 PF03168 - Late embryogenesis abundant protein (LEA_2) Chr01 - View
Populus trichocarpa Potri.014G090900 PTHR31852//PTHR31852:SF6 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Chr14 + View
Populus trichocarpa Potri.003G133350 Chr03 + View
Populus trichocarpa Potri.002G165100 PTHR31852//PTHR31852:SF6 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Chr02 + View
Phaseolus vulgaris Phvul.002G160800 PF03168 - Late embryogenesis abundant protein (LEA_2) Chr02 + View
Phaseolus vulgaris Phvul.002G293800 PF03168 - Late embryogenesis abundant protein (LEA_2) Chr02 + View
Quercus lobata QL09p012150 9 - View
Quercus lobata QL02p032777 CM012294 - View
Quercus lobata QL04p055724 4 + View
Rosa chinensis RcHm_v2.0_Chr7g0196201 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim07G0009600 chr07 - View
Rhododendron simsii Rhsim02G0236400 chr02 + View
Salvia bowleyana SalBow2G1146 GWHASIU00000007 - View
Salvia bowleyana SalBow4G2709 GWHASIU00000008 - View
Salix brachista Sabra02G0146400 GWHAAZH00000002 - View
Salix brachista Sabra01G0073400 GWHAAZH00000001 - View
Salix brachista Sabra03G0095700 GWHAAZH00000003 + View
Simmondsia chinensis Sc01g0009930 GWHAASQ00000001 + View
Sechium edule Sed0022649 LG01 - View
Sechium edule Sed0025597 LG05 - View
Solanum lycopersicum Solyc08g008150.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *-* A0A2U1NM32_ARTAN) SL4.0ch08 + View
Solanum lycopersicum Solyc08g081700.1 late embryogenesis abundant protein At1g64065-like (AHRD V3.3 *** A0A2I4FBP0_9ROSI) SL4.0ch08 + View
Schrenkiella parvula Sp4g28210 PTHR31852:SF6 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN ch4-6 + View
Schrenkiella parvula Sp2g00640 PTHR31234//PTHR31234:SF4 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN ch2-1 - View
Solanum pennellii Sopen08g004000 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 | BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Spenn-ch08 + View
Solanum pennellii Sopen08g029990 hypothetical protein Spenn-ch08 + View
Solanum pennellii Sopen01g038960 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 | BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400005783 Plant cell wall protein SlTFR88 ST4.03ch08 + View
Solanum tuberosum PGSC0003DMG400020886 Conserved gene of unknown function ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400012315 Conserved gene of unknown function ST4.03ch08 + View
Trochodendron aralioides TAR636G1394 group1 - View
Trochodendron aralioides TAR629G1475 group0 + View
Trochodendron aralioides TAR375G0775 group15 + View
Trochodendron aralioides TAR636G0597 group1 + View
Theobroma cacao Thecc.03G187100 Late embryogenesis abundant hydroxyproline-rich glycofamily protein Chromosome_3 + View
Theobroma cacao Thecc.03G287600 Late embryogenesis abundant hydroxyproline-rich glycofamily protein Chromosome_3 + View
Theobroma cacao Thecc.01G351700 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Chromosome_1 - View
Tarenaya hassleriana THA.LOC104814777 uncharacterized protein LOC104814777 NW_010960187.1 + View
Tarenaya hassleriana THA.LOC104809652 late embryogenesis abundant protein At1g64065 NW_010965019.1 - View
Tarenaya hassleriana THA.LOC104802047 uncharacterized protein LOC104802047 NW_010970490.1 + View
Trifolium pratense TPR.G3424 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI14G0094 NC_052249.1 + View
Tripterygium wilfordii TWI74G0559 NC_052234.1 + View
Tripterygium wilfordii TWI53G0244 NC_052244.1 - View
Tripterygium wilfordii TWI60G0498 NC_052246.1 - View
Tripterygium wilfordii TWI23G1075 NC_052239.1 + View
Vigna mungo VMungo0251G2003 CM024069.1 + View
Vigna mungo VMungo0331G0224 CM024078.1 - View
Vigna mungo VMungo1215G3100 CM024074.1 - View
Vanilla planifolia HPP92_023940 Late embryogenesis abundant hydroxyproline-rich glycoprotein family, putative *** CM028162.1 + View