Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold51G18628 scaffold51 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G5750 LG-6 - View
Aethionema arabicum Aa31LG10G6950 LG-10 + View
Acer truncatum Atru.chr6.2070 chr6 + View
Actinidia chinensis Actinidia39557 Lachesis_group17 - View
Actinidia chinensis Actinidia19508 Lachesis_group2 - View
Actinidia chinensis Actinidia16731 Lachesis_group12 - View
Arabidopsis lyrata AL1G43760 scaffold_1 - View
Arabidopsis lyrata AL4G30390 scaffold_4 - View
Avicennia marina MSTRG.7468 ScioBoG_102840_HRSCAF_103099 - View
Avicennia marina MSTRG.16214 ScioBoG_19538_HRSCAF_19626 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YZ06AV K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT1G29910 chlorophyll A/B binding protein 3 member of Chlorophyll a/b-binding protein family chlorophyll A/B binding protein 3 (CAB3)%3B FUNCTIONS IN: chlorophyll binding%3B INVOLVED IN: photosynthesis%2C light harvesting%2C photosynthesis%3B LOCATED IN: in 6 components%3B EXPRESSED IN: cotyledon%2C guard cell%2C juvenile leaf%2C cultured cell%2C leaf%3B CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344)%3B BEST Arabidopsis thaliana protein match is: chlorophyll A/B-binding protein 2 (TAIR:AT1G29920.1)%3B Has 2420 Blast hits to 2340 proteins in 222 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4%3B Fungi - 0%3B Plants - 2091%3B Viruses - 0%3B Other Eukaryotes - 325 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT2G34420 photosystem II light harvesting complex protein B1B2 Photosystem II type I chlorophyll a/b-binding protein photosystem II light harvesting complex gene B1B2 (LHB1B2)%3B FUNCTIONS IN: chlorophyll binding%3B INVOLVED IN: photosynthesis%2C light harvesting in photosystem II%2C photosynthesis%3B LOCATED IN: in 7 components%3B EXPRESSED IN: cotyledon%2C guard cell%2C juvenile leaf%2C cultured cell%2C leaf%3B EXPRESSED DURING: seed development stages%3B CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344)%3B BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 1 (TAIR:AT1G29930.1)%3B Has 2425 Blast hits to 2343 proteins in 222 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 4%3B Fungi - 0%3B Plants - 2093%3B Viruses - 0%3B Other Eukaryotes - 328 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB03g13852 ChrB03 - View
Brassica carinata BcaC05g27004 ChrC05 - View
Brassica carinata BcaC06g35473 ChrC06 + View
Brassica carinata BcaB06g28765 ChrB06 - View
Brassica napus A03p19130 A03 - View
Brassica napus C04p63750 C04 - View
Brassica napus C05p28670 C05 - View
Brassica napus A04p26350 A04 - View
Brassica oleracea BolC3t19882H C3 + View
Brassica oleracea BolC5t31588H C5 - View
Brassica oleracea BolC7t42058H C7 - View
Camellia sinensis var. sinensis CSS0010537 PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Vitis vinifera] Chr8 - View
Capsicum annuum CAN.G257.12 PGAv.1.6.scaffold257 + View
Cannabis sativa CANSAT35G1975 NC_044378.1 - View
Cicer arietinum L. Ca_18277_v3 Ca_LG6_v3 - View
Coffea canephora Cc09_g09500 Chlorophyll a-b binding protein 36, chloroplastic chr9 + View
Citrus clementina Ciclev10016287m.g scaffold_2 - View
Citrus clementina Ciclev10033802m.g scaffold_4 + View
Carpinus fangiana Cfa000976 Cfa01 - View
Cardamine hirsuta CARHR128500 chlorophyll A/B binding protein 3 Chr4 - View
Carya illinoinensis CiPaw.09G129000 K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) Chr09 - View
Citrullus lanatus ClCG01G024370 Chlorophyll a-b binding protein 21, chloroplastic CG_Chr01 - View
Cucumis melo MELO3C002727.2 Chlorophyll a-b binding protein, chloroplastic chr12 + View
Cucumis melo MELO3C032881.2 Chlorophyll a-b binding protein, chloroplastic chr08 - View
Chenopodium quinoa AUR62027587 Chlorophyll a-b binding protein, chloroplastic C_Quinoa_Scaffold_1125 - View
Capsella rubella Carub.0004s1609 K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) scaffold_4 - View
Capsella rubella Carub.0001s2813 K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) scaffold_1 - View
Cucumis sativus L. CsaV3_6G051520 Chlorophyll a-b binding protein, chloroplastic chr6 - View
Cucumis sativus L. CsaV3_1G032510 Chlorophyll a-b binding protein, chloroplastic chr1 + View
Daucus carota DCAR_003939 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_005105 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv32281 GWHABJS00000016 - View
Davidia involucrata Dinv30710 GWHABJS00000020 - View
Durio zibethinus Duzib192G0268 NW_019168037.1 - View
Eucalyptus grandis Eucgr.D00319 Chr04 - View
Erythranthe guttata Migut.M00933 scaffold_13 - View
Erythranthe guttata Migut.H01378 scaffold_8 - View
Eutrema salsugineum Thhalv10017088m.g K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) scaffold_10 - View
Fragaria x ananassa FAN14G4323 K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) Fvb6-1 + View
Fragaria x ananassa FAN09G1948 K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) Fvb6-2 - View
Fragaria x ananassa FAN11G1833 K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) Fvb3-4 - View
Fragaria x ananassa FAN05G3189 K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) Fvb6-3 + View
Gossypium hirsutum Gohir.D06G141400 PTHR21649//PTHR21649:SF26 - CHLOROPHYLL A/B BINDING PROTEIN // CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED D06 - View
Gossypium hirsutum Gohir.D06G205075 PTHR21649//PTHR21649:SF26 - CHLOROPHYLL A/B BINDING PROTEIN // CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED D06 + View
Gossypium hirsutum Gohir.A05G150200 K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) A05 - View
Gossypium hirsutum Gohir.D05G152800 K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) D05 - View
Glycine max Glyma.05G128000 K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) Gm05 + View
Glycine max Glyma.08G082900 K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) Gm08 + View
Gossypium raimondii Gorai.010G239300 Chr10 + View
Gossypium raimondii Gorai.010G165000 Chr10 - View
Gossypium raimondii Gorai.009G156900 Chr09 - View
Lonicera japonica Lj2C309T7 GWHAAZE00000002 - View
Malus domestica MD10G1265300 chlorophyll A/B binding protein 1 Chr10 - View
Manihot esculenta Manes.15G118700 Chromosome15 + View
Manihot esculenta Manes.17G066700 Chromosome17 - View
Medicago truncatula Medtr4g094605 light-harvesting complex I chlorophyll A/B-binding protein chr4 + View
Olea europaea Oeu042439.2 chr10 + View
Olea europaea Oeu021505.1 chr16 - View
Punica granatum PGR042G0482 NC_045130.1 - View
Prunus persica Prupe.4G076200 K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) Pp04 - View
Pisum sativum Psat7g091520 Chlorophyll A-B binding protein chr7LG7 + View
Populus trichocarpa Potri.011G079500 K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1) Chr11 - View
Quercus lobata QL05p059359 5 - View
Salvia bowleyana SalBow7G0209 GWHASIU00000005 + View
Salvia bowleyana SalBow8G2843 GWHASIU00000004 - View
Simmondsia chinensis Sc05g0006450 GWHAASQ00000005 - View
Simmondsia chinensis Sc17g0005110 GWHAASQ00000017 + View
Sechium edule Sed0009915 LG01 - View
Sechium edule Sed0001377 LG14 - View
Solanum lycopersicum Solyc02g070940.1 Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** A0A2G3A7J8_CAPAN) SL4.0ch02 + View
Schrenkiella parvula Sp4g16690 PTHR21649:SF26 - CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED ch4-6 - View
Solanum pennellii Sopen02g019860 Chlorophyll a-b binding protein 21, chloroplast precursor (LHCII type I CAB-21) (LHCP) - Nicotiana tabacum (Common tobacco), Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center. | chlorophyll A/B binding protein 1 (CAB1) | FUNCTIONS IN: chlorophyll binding | INVOLVED IN: photosynthesis | LOCATED IN: light-harvesting complex, thylakoid, chloroplast thylakoid membrane, chloroplast | EXPRESSED IN: guard cell, juvenile leaf, cultured cell | CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein | BEST Arabidopsis thaliana protein match is: chlorophyll A/B binding protein 3 Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400042498 Chlorophyll a/b binding protein ST4.03ch02 - View
Trochodendron aralioides TAR629G1126 group0 - View
Trochodendron aralioides TAR627G0074 group6 - View
Trochodendron aralioides TAR624G1192 group9 - View
Tarenaya hassleriana THA.LOC104820637 chlorophyll a-b binding protein 1%2C chloroplastic isoform X1 NW_010966274.1 - View
Trifolium pratense TPR.G4884 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI53G0926 NC_052244.1 - View
Tripterygium wilfordii TWI09G1002 NC_052245.1 - View
Tripterygium wilfordii TWI73G0754 NC_052232.1 - View
Utricularia gibba unitig_37.g12106 unitig_37 + View
Utricularia gibba unitig_26.g10096 unitig_26 + View
Vaccinium macrocarpon vmacro03966 Similar to CAB2R: Chlorophyll a-b binding protein 2, chloroplastic (Oryza sativa subsp. japonica OX%3D39947) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G0441 CM024069.1 + View
Vitis vinifera GSVIVG01021405001 chr10 - View