Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G14090 LG-10 - View
Acer truncatum Atru.chr3.1869 chr3 + View
Actinidia chinensis Actinidia28962 Lachesis_group3 + View
Arabidopsis lyrata AL5G41970 scaffold_5 - View
Arabidopsis lyrata AL4G42730 scaffold_4 - View
Amaranthus hybridus Ah.13g073240 Polygalacturonase (PG) (EC 3.2.1.15) (Pectinase) AmaHy_arrow1_Scaffold_13 + View
Amaranthus hybridus Ah.07g203130 AmaHy_arrow1_Scaffold_7 - View
Arabidopsis thaliana AT3G59850 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein%3B FUNCTIONS IN: polygalacturonase activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: embryo%2C pedicel%3B EXPRESSED DURING: 4 anthesis%2C C globular stage%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectin lyase fold (InterPro:IPR012334)%2C Glycoside hydrolase%2C family 28 (InterPro:IPR000743)%2C Parallel beta-helix repeat (InterPro:IPR006626)%3B BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein (TAIR:AT2G43870.1)%3B Has 4315 Blast hits to 4302 proteins in 546 species: Archae - 4%3B Bacteria - 1265%3B Metazoa - 14%3B Fungi - 1413%3B Plants - 1493%3B Viruses - 2%3B Other Eukaryotes - 124 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0743G238 AmTr_v1.0_scaffold00066 + View
Brassica carinata BcaB06g29347 ChrB06 - View
Brassica carinata BcaC07g40554 ChrC07 + View
Brassica carinata BcaB01g03353 ChrB01 + View
Brassica carinata BcaC01g05207 ChrC01 + View
Brassica carinata BcaB02g08887 ChrB02 - View
Brassica napus C04p70770 C04 - View
Brassica napus A09p52150 A09 - View
Brassica napus C08p34820 C08 - View
Brassica napus C04p04820 C04 + View
Brassica napus A04p33070 A04 - View
Brassica oleracea BolC8t47001H C8 - View
Brassica rapa BraA09t40646Z A09 - View
Brassica rapa BraA04t18767Z A04 - View
Beta vulgaris EL10Ac3g06144 PTHR31375//PTHR31375:SF2 - FAMILY NOT NAMED // POLYGALACTURONASE/PECTINASE Chr3_EL10_PGA_scaffold7 - View
Capsicum annuum CAN.G566.30 PGAv.1.6.scaffold566 - View
Cannabis sativa CANSAT56G0928 NC_044371.1 - View
Corylus avellana Haze_11146 Similar to Polygalacturonase (Prunus persica OX%3D3760) 9 - View
Carpinus fangiana Cfa008505 Cfa03 - View
Cardamine hirsuta CARHR139040 Polygalacturonase, putative Chr4 - View
Cardamine hirsuta CARHR170200 Polygalacturonase-like protein Chr5 - View
Carya illinoinensis CiPaw.01G200600 K01184 - polygalacturonase (E3.2.1.15) Chr01 - View
Carya illinoinensis CiPaw.02G124300 K01184 - polygalacturonase (E3.2.1.15) Chr02 - View
Carica papaya Cpa.g.sc250.3 supercontig_250 - View
Chenopodium quinoa AUR62002454 rhgA: Rhamnogalacturonase A C_Quinoa_Scaffold_4480 - View
Chenopodium quinoa AUR62023726 G9: Polygalacturonase C_Quinoa_Scaffold_2187 - View
Capsella rubella Carub.0005s2658 K01184 - polygalacturonase (E3.2.1.15) scaffold_5 - View
Daucus carota DCAR_023784 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_027504 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv33238 GWHABJS00000014 - View
Davidia involucrata Dinv24758 GWHABJS00000016 - View
Erigeron canadensis ECA248G3362 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.H01886 Chr01 - View
Eucalyptus grandis Eucgr.H00250 Chr08 - View
Erythranthe guttata Migut.N03042 scaffold_14 - View
Eutrema salsugineum Thhalv10006416m.g K01184 - polygalacturonase (E3.2.1.15) scaffold_19 + View
Eutrema salsugineum Thhalv10001794m.g PTHR31375:SF2 - POLYGALACTURONASE/PECTINASE scaffold_22 - View
Eutrema salsugineum Thhalv10007830m.g PTHR31375:SF31 - F3F20.10 PROTEIN-RELATED scaffold_5 + View
Fragaria x ananassa FAN28G0891 K01184 - polygalacturonase (E3.2.1.15) Fvb1-1 - View
Fragaria vesca FvH4_1g00260 PTHR31375:SF31 - F3F20.10 PROTEIN-RELATED Fvb1 - View
Glycine max Glyma.04G157500 PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED Gm04 - View
Hydrangea macrophylla Hma1.2p1_0108F.1_g052020 Hma1.2p1_0108F.1 - View
Lonicera japonica Lj6A275G54 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_1_74120 K01184 - polygalacturonase (E3.2.1.15) Lsat_1_v8_lg_1 + View
Magnolia biondii MBI07_g44862_MAGBIO AED:0.28 Chr07 + View
Malus domestica MD00G1087800 Pectin lyase-like superfamily protein Chr00 - View
Malus domestica MD15G1143800 Pectin lyase-like superfamily protein Chr15 - View
Manihot esculenta Manes.05G122200 Chromosome05 - View
Manihot esculenta Manes.01G019100 Chromosome01 - View
Nelumbo nucifera Nn7g37475 chr7 + View
Olea europaea Oeu022906.1 scaffold2014 + View
Oryza sativa ssp. japonica Os05g0578600 Similar to Polygalacturonase PG2. chr05 - View
Oryza sativa ssp. japonica Os01g0891100 Similar to Polygalacturonase. chr01 + View
Petunia axillaris Peaxi162Scf00057g02720 Pectin lyase-like superfamily protein Peaxi162Scf00057 + View
Petunia axillaris Peaxi162Scf01205g00034 Pectin lyase-like superfamily protein Peaxi162Scf01205 + View
Punica granatum PGR042G2326 NC_045130.1 - View
Punica granatum PGR142G3573 NC_045128.1 - View
Populus trichocarpa Potri.017G003500 K01184 - polygalacturonase (E3.2.1.15) Chr17 + View
Populus trichocarpa Potri.007G144100 K01184 - polygalacturonase (E3.2.1.15) Chr07 - View
Rosa chinensis RcHm_v2.0_Chr2g0084561 RcHm_v2.0_Chr2 - View
Striga asiatica SGA_v2.0_scaffold12G06212 scaffold12 + View
Striga asiatica SGA_v2.0_scaffold25G11012 scaffold25 + View
Striga asiatica SGA_v2.0_scaffold19G08881 scaffold19 + View
Salvia bowleyana SalBow3G4406 GWHASIU00000006 - View
Salvia bowleyana SalBow6G3921 GWHASIU00000002 + View
Salix brachista Sabra17G0007100 GWHAAZH00000017 - View
Simmondsia chinensis Sc19g0002350 GWHAASQ00000019 - View
Sapria himalayana SHI01270 scaffold1_25991295 - View
Solanum lycopersicum Solyc12g096730.3 Pectin lyase-like superfamily protein (AHRD V3.3 *** O22817_ARATH) SL4.0ch12 + View
Solanum lycopersicum Solyc08g014540.1 Pectin lyase-like superfamily protein (AHRD V3.3 *** O80559_ARATH) SL4.0ch08 - View
Schrenkiella parvula Sp4g25940 PTHR31375//PTHR31375:SF2 - FAMILY NOT NAMED // POLYGALACTURONASE/PECTINASE ch4-6 - View
Schrenkiella parvula Sp5g03280 K01184 - polygalacturonase (E3.2.1.15) ch5-1 + View
Solanum pennellii Sopen08g005530 Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: root, carpel | EXPRESSED DURING: 4 anthesis | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectin lyase fold , Glycoside hydrolase, family 28 , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch08 + View
Solanum pennellii Sopen12g032560 Polygalacturonase precursor (EC 3.2.1.15) (PG) (Pectinase) - Prunus persica (Peach), Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: sepal, male gametophyte, stamen | EXPRESSED DURING: 4 anthesis | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectin lyase fold , Glycoside hydrolase, family 28 , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch12 + View
Solanum tuberosum PGSC0003DMG400029357 Polygalacturonase ST4.03ch12 + View
Solanum tuberosum PGSC0003DMG400025213 Polygalacturonase ST4.03ch08 + View
Selenicereus undatus Hund12320 Scaffold_33679 - View
Selenicereus undatus Hund22575 Scaffold_33680 - View
Trochodendron aralioides TAR362G0040 group17 - View
Tarenaya hassleriana THA.LOC104804200 probable polygalacturonase At2g43860 NW_010960188.1 - View
Tripterygium wilfordii TWI15G0399 NC_052247.1 - View
Tripterygium wilfordii TWI63G1749 NC_052240.1 - View
Tripterygium wilfordii TWI38G0726 NC_052252.1 + View
Vitis vinifera GSVIVG01038241001 chr5 - View
Zea mays Zm00001eb145110 Zm00001e019002 Exopolygalacturonase clone GBGE184 3 - View