Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Prupe.8G169500 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp08 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G19320 LG-4 - View
Acer truncatum Atru.chr3.876 chr3 - View
Arabidopsis lyrata AL5G31740 scaffold_5 - View
Avicennia marina MSTRG.25275 ScioBoG_4119_HRSCAF_4138 + View
Arabidopsis thaliana AT4G35130 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1)%3B Has 46569 Blast hits to 13927 proteins in 247 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 46%3B Fungi - 110%3B Plants - 45942%3B Viruses - 0%3B Other Eukaryotes - 467 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62890.1)%3B Has 32632 Blast hits to 12262 proteins in 174 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 25%3B Fungi - 25%3B Plants - 32307%3B Viruses - 0%3B Other Eukaryotes - 275 (source: NCBI BLink). Chr3 - View
Amborella trichopoda ATR0661G097 AmTr_v1.0_scaffold00001 - View
Brassica carinata BcaB01g00529 ChrB01 + View
Brassica napus A09p44370 A09 - View
Brassica napus C08p26600 C08 - View
Brassica oleracea BolC8t50273H C8 - View
Brassica rapa BraA09t39897Z A09 - View
Camellia sinensis var. sinensis CSS0014235 hypothetical protein VITISV_031859 [Vitis vinifera] Chr1 + View
Cannabis sativa CANSAT01G1853 NC_044373.1 + View
Cicer arietinum L. Ca_24929_v3 Ca_LG8_v3 - View
Corylus avellana Haze_03718 Similar to At3g51320: Pentatricopeptide repeat-containing protein At3g51320 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc07_g11140 Putative Pentatricopeptide repeat-containing protein At3g51320 chr7 - View
Coffea canephora Cc10_g01190 Pentatricopeptide repeat-containing protein At1g20230 chr10 - View
Citrus clementina Ciclev10027592m.g scaffold_7 + View
Carpinus fangiana Cfa007013 Cfa02 - View
Cardamine hirsuta CARHR243440 Pentatricopeptide repeat-containing protein Chr7 - View
Cardamine hirsuta CARHR020730 Pentatricopeptide repeat-containing protein Chr1 + View
Cardamine hirsuta CARHR160900 Pentatricopeptide repeat-containing protein Chr5 - View
Carya illinoinensis CiPaw.08G127800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr08 + View
Citrullus lanatus ClCG01G020500 Pentatricopeptide repeat-containing family protein CG_Chr01 - View
Cucumis melo MELO3C007930.2 Pentatricopeptide repeat-containing family protein chr08 - View
Carica papaya Cpa.g.sc6.296 supercontig_6 - View
Capsella rubella Carub.0005s1769 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_5 - View
Capsella rubella Carub.0001s1976 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_1 + View
Cucumis sativus L. CsaV3_7G001270 Pentatricopeptide repeat-containing protein chr7 - View
Cucumis sativus L. CsaV3_6G047380 pentatricopeptide repeat-containing protein At3g51320 chr6 - View
Daucus carota DCAR_023136 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv40126 GWHABJS00000014 + View
Davidia involucrata Dinv14093 GWHABJS00000005 + View
Davidia involucrata Dinv08563 GWHABJS00000012 - View
Durio zibethinus Duzib093G0454 NW_019167937.1 + View
Durio zibethinus Duzib264G0929 NW_019167960.1 - View
Durio zibethinus Duzib147G1100 NW_019168470.1 - View
Erigeron canadensis ECA238G0796 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA234G3154 Conyza_canadensis_scaffold:4 - View
Erigeron canadensis ECA232G3324 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.G01766 Chr07 + View
Eucalyptus grandis Eucgr.F01709 Chr06 - View
Eucalyptus grandis Eucgr.J02477 Chr10 - View
Erythranthe guttata Migut.B00056 scaffold_2 + View
Eutrema salsugineum Thhalv10010283m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_16 + View
Fragaria x ananassa FAN27G2047 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb2-1 + View
Gossypium hirsutum Gohir.A02G173000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A02 - View
Gossypium hirsutum Gohir.D01G094900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D01 + View
Gossypium hirsutum Gohir.D03G006900 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D03 + View
Gossypium hirsutum Gohir.A12G036000 PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) A12 + View
Glycine max Glyma.01G163800 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Gm01 + View
Glycine max Glyma.11G079701 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm11 - View
Gossypium raimondii Gorai.003G007200 Chr03 + View
Hydrangea macrophylla Hma1.2p1_0869F.1_g230630 Hma1.2p1_0869F.1 + View
Lupinus albus Lalb_Chr09g0321551 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr09 + View
Lotus japonicus Lj2g0006386 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) chr2 - View
Lonicera japonica Lj2P481T13 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_4_143781 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lsat_1_v8_lg_4 + View
Manihot esculenta Manes.02G104400 Chromosome02 - View
Manihot esculenta Manes.02G108900 Chromosome02 - View
Medicago truncatula Medtr8g074780 PPR containing plant-like protein chr8 - View
Medicago truncatula Medtr5g022740 PPR containing plant-like protein chr5 - View
Punica granatum PGR102G3130 NC_045129.1 + View
Populus trichocarpa Potri.005G109800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr05 + View
Phaseolus vulgaris Phvul.002G106000 PF01535//PF12854 - PPR repeat (PPR) // PPR repeat (PPR_1) Chr02 + View
Phaseolus vulgaris Phvul.003G265400 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr03 + View
Quercus lobata QL06p051311 6 - View
Rosa chinensis RcHm_v2.0_Chr2g0098771 RcHm_v2.0_Chr2 + View
Rosa chinensis RcHm_v2.0_Chr6g0303171 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim10G0207800 chr10 + View
Rhododendron simsii Rhsim11G0193800 chr11 - View
Salvia bowleyana SalBow5G0236 GWHASIU00000003 - View
Salix brachista Sabra05G0090100 GWHAAZH00000005 + View
Simmondsia chinensis Sc16g0001910 GWHAASQ00000016 + View
Sechium edule Sed0006118 LG10 - View
Schrenkiella parvula Sp5g10910 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch5-1 + View
Solanum pennellii Sopen01g053490 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400006178 Pentatricopeptide repeat-containing protein ST4.03ch01 - View
Trochodendron aralioides TAR625G1151 group4 - View
Trochodendron aralioides TAR381G1559 group11 + View
Theobroma cacao Thecc.08G050100 Pentatricopeptide repeat (PPR) superfamily protein Chromosome_8 + View
Tarenaya hassleriana THA.LOC104807380 pentatricopeptide repeat-containing protein At4g35130%2C chloroplastic isoform X2 NW_010963495.1 - View
Tarenaya hassleriana THA.LOC104821341 pentatricopeptide repeat-containing protein At3g51320 NW_010966459.1 - View
Trifolium pratense TPR.G10547 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI56G0148 NC_052242.1 + View
Tripterygium wilfordii TWI09G1622 NC_052245.1 + View
Tripterygium wilfordii TWI73G0644 NC_052232.1 - View
Vigna mungo VMungo1215G0014 CM024074.1 - View