Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr3.2892 chr3 + View
Actinidia chinensis Actinidia16384 Lachesis_group24 - View
Actinidia chinensis Actinidia06965 Lachesis_group13 - View
Arabidopsis lyrata AL6G30890 scaffold_6 + View
Aquilegia oxysepala Aqoxy2G00385 CHR02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.N51291 K14409 - protein SMG7 (SMG7, EST1C) arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.7N5RT2 K14409 - protein SMG7 (SMG7, EST1C) arahy.Tifrunner.gnm1.Arahy.17 - View
Arabidopsis thaliana AT5G19400 Telomerase activating protein Est1 Encodes SMG7%2C a protein that possesses an evolutionarily conserved EST1 domain and exhibits strong homology to human SMG6 (EST1A) and SMG7 (EST1C) proteins. SMG7 plays an evolutionarily conserved role in nonsense-mediated RNA decay (NMD). Required for exit from meiosis. Hypomorphic smg7 alleles render mutant plants sterile by causing an unusual cell-cycle arrest in anaphase II that is characterized by delayed chromosome decondensation and aberrant rearrangement of the meiotic spindle. Disruption of SMG7 causes embryonic lethality. SMG7%3B CONTAINS InterPro DOMAIN/s: Telomerase activating protein Est1 (InterPro:IPR019458)%3B BEST Arabidopsis thaliana protein match is: Telomerase activating protein Est1 (TAIR:AT1G28260.2)%3B Has 648 Blast hits to 623 proteins in 143 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 367%3B Fungi - 169%3B Plants - 90%3B Viruses - 0%3B Other Eukaryotes - 22 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC03g13674 ChrC03 + View
Beta vulgaris EL10Ac4g10118 K14409 - protein SMG7 (SMG7, EST1C) Chr4_EL10_PGA_scaffold1 + View
Camellia sinensis var. sinensis CSS0033106 PREDICTED: protein SMG7 [Vitis vinifera] Chr11 - View
Cicer arietinum L. Ca_06209_v3 Ca_LG2_v3 + View
Corylus avellana Haze_23231 Similar to SMG7: Protein SMG7 (Arabidopsis thaliana OX%3D3702) 6 - View
Citrus clementina Ciclev10014151m.g scaffold_2 - View
Carpinus fangiana Cfa009857 Cfa04 - View
Cardamine hirsuta CARHR193550 Telomerase-binding protein EST1A Chr6 - View
Carya illinoinensis CiPaw.14G113000 K14409 - protein SMG7 (SMG7, EST1C) Chr14 + View
Carya illinoinensis CiPaw.13G150400 K14409 - protein SMG7 (SMG7, EST1C) Chr13 + View
Citrullus lanatus ClCG03G012560 Telomerase-binding protein EST1A CG_Chr03 + View
Cucumis melo MELO3C015113.2 Protein SMG7 chr02 - View
Corchorus olitorius COL.COLO4_32762 hypothetical protein AWUE01021208.1 - View
Carica papaya Cpa.g.sc157.60 supercontig_157 + View
Chenopodium quinoa AUR62000193 SMG7: Protein SMG7 C_Quinoa_Scaffold_2088 - View
Chenopodium quinoa AUR62006543 SMG7: Protein SMG7 C_Quinoa_Scaffold_3429 - View
Capsella rubella Carub.0006s1774 K14409 - protein SMG7 (SMG7, EST1C) scaffold_6 + View
Cucumis sativus L. CsaV3_1G043450 Protein smg7 chr1 - View
Davidia involucrata Dinv15036 GWHABJS00000010 - View
Durio zibethinus Duzib150G0706 NW_019167882.1 - View
Durio zibethinus Duzib168G0131 NW_019168159.1 - View
Erigeron canadensis ECA238G4638 Conyza_canadensis_scaffold:6 - View
Eutrema salsugineum Thhalv10012551m.g scaffold_2 + View
Fragaria x ananassa FAN11G3218 K14409 - protein SMG7 (SMG7, EST1C) Fvb3-4 - View
Fragaria x ananassa FAN25G3852 K14409 - protein SMG7 (SMG7, EST1C) Fvb3-1 - View
Fragaria x ananassa FAN21G1175 K14409 - protein SMG7 (SMG7, EST1C) Fvb3-2 + View
Fragaria vesca FvH4_3g27840 K14409 - protein SMG7 (SMG7, EST1C) Fvb3 + View
Gossypium hirsutum Gohir.D07G123700 K14409 - protein SMG7 (SMG7, EST1C) D07 + View
Gossypium hirsutum Gohir.A09G110450 PTHR15696//PTHR15696:SF0 - SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7 // TELOMERASE-BINDING PROTEIN EST1A A09 - View
Gossypium hirsutum Gohir.A07G119450 PTHR15696//PTHR15696:SF0 - SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7 // TELOMERASE-BINDING PROTEIN EST1A A07 + View
Gossypium hirsutum Gohir.D13G222500 K14409 - protein SMG7 (SMG7, EST1C) D13 + View
Gossypium hirsutum Gohir.D09G106800 PTHR15696//PTHR15696:SF0 - SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7 // TELOMERASE-BINDING PROTEIN EST1A D09 - View
Glycine max Glyma.20G040700 PTHR15696//PTHR15696:SF0 - SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7 // TELOMERASE-BINDING PROTEIN EST1A Gm20 - View
Glycine max Glyma.07G231800 PTHR15696//PTHR15696:SF0 - SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7 // TELOMERASE-BINDING PROTEIN EST1A Gm07 - View
Glycine max Glyma.02G279500 PTHR15696//PTHR15696:SF0 - SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7 // TELOMERASE-BINDING PROTEIN EST1A Gm02 + View
Gossypium raimondii Gorai.006G124400 Chr06 - View
Gossypium raimondii Gorai.001G133700 Chr01 + View
Lupinus albus Lalb_Chr17g0347901 K14409 - protein SMG7 (SMG7, EST1C) Lalb_Chr17 + View
Lupinus albus Lalb_Chr10g0106241 PTHR15696//PTHR15696:SF0 - SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7 // TELOMERASE-BINDING PROTEIN EST1A Lalb_Chr10 + View
Lotus japonicus Lj6g0018672 K14409 - protein SMG7 (SMG7, EST1C) chr6 - View
Lotus japonicus LjContig00564g0007413 K14409 - protein SMG7 (SMG7, EST1C) Contig00564 - View
Malus domestica MD03G1165600 Telomerase activating protein Est1 Chr03 + View
Malus domestica MD11G1184900 Telomerase activating protein Est1 Chr11 + View
Manihot esculenta Manes.02G139200 Chromosome02 + View
Manihot esculenta Manes.01G178600 Chromosome01 + View
Medicago truncatula Medtr5g089510 telomerase activating protein Est1 chr5 + View
Nelumbo nucifera Nn2g14811 chr2 - View
Nelumbo nucifera Nn7g36713 chr7 - View
Punica granatum PGR102G3331 NC_045129.1 + View
Populus trichocarpa Potri.001G275400 K14409 - protein SMG7 (SMG7, EST1C) Chr01 + View
Phaseolus vulgaris Phvul.006G014200 K14409 - protein SMG7 (SMG7, EST1C) Chr06 - View
Phaseolus vulgaris Phvul.008G201200 K14409 - protein SMG7 (SMG7, EST1C) Chr08 - View
Quercus lobata QL01p017120 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0050561 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim13G0209300 chr13 + View
Salix brachista Sabra16G0169700 GWHAAZH00000016 + View
Simmondsia chinensis Sc16g0011040 GWHAASQ00000016 + View
Sechium edule Sed0022809 LG08 - View
Schrenkiella parvula Sp6g25010 K14409 - protein SMG7 (SMG7, EST1C) ch6-6 - View
Trochodendron aralioides TAR636G1222 group1 - View
Trochodendron aralioides TAR623G1343 group7 - View
Trochodendron aralioides TAR633G2268 group2 + View
Theobroma cacao Thecc.09G248200 Smg-7 Chromosome_9 + View
Vigna mungo VMungo0540G0682 CM024075.1 - View
Vigna mungo VMungo0647G1982 CM024073.1 + View
Vitis vinifera GSVIVG01037278001 chr6 + View