Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Potri.015G131600 PTHR32285//PTHR32285:SF18 - FAMILY NOT NAMED // PROTEIN YLS7-RELATED Chr15 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G8080 LG-3 - View
Acer truncatum Atru.chr1.632 chr1 + View
Actinidia chinensis Actinidia25040 Lachesis_group22 + View
Actinidia chinensis Actinidia13553 Lachesis_group3 - View
Arabidopsis lyrata AL8G25890 scaffold_8 - View
Avicennia marina MSTRG.27168 ScioBoG_8578_HRSCAF_8617 + View
Avicennia marina MSTRG.8423 ScioBoG_102841_HRSCAF_103114 - View
Amaranthus hybridus Ah.07g208280 AmaHy_arrow1_Scaffold_7 - View
Amaranthus hybridus Ah.13g067390 Protein YLS7 (Protein TRICHOME BIREFRINGENCE-LIKE 17) (Protein YELLOW-LEAF-SPECIFIC GENE 7) AmaHy_arrow1_Scaffold_13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NLN73P PTHR32285//PTHR32285:SF18 - FAMILY NOT NAMED // PROTEIN YLS7-RELATED arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.68Z3SV PTHR32285//PTHR32285:SF18 - FAMILY NOT NAMED // PROTEIN YLS7-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arabidopsis thaliana AT4G25360 TRICHOME BIREFRINGENCE-LIKE 18 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). TRICHOME BIREFRINGENCE-LIKE 18 (TBL18)%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT5G51640.1)%3B Has 1342 Blast hits to 1320 proteins in 31 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 1339%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT5G51640 trichome birefringence-like protein (DUF828) Encodes leaf-senescence-related protein. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members%2C two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose%2C presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff %26 Wolf Scheible%2C 2010%2C personal communication). YELLOW-LEAF-SPECIFIC GENE 7 (YLS7)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231%2C plant (InterPro:IPR004253)%3B BEST Arabidopsis thaliana protein match is: TRICHOME BIREFRINGENCE-LIKE 18 (TAIR:AT4G25360.2)%3B Has 1342 Blast hits to 1319 proteins in 31 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 0%3B Plants - 1337%3B Viruses - 0%3B Other Eukaryotes - 3 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC03g14587 ChrC03 + View
Brassica carinata BcaB05g23996 ChrB05 + View
Brassica napus C07p54230 C07 + View
Brassica napus C02p20310 C02 + View
Brassica napus A02p12200 A02 + View
Brassica oleracea BolC2t08165H C2 + View
Brassica rapa BraA02t06285Z A02 + View
Beta vulgaris EL10Ac3g05792 PTHR32285//PTHR32285:SF18 - FAMILY NOT NAMED // PROTEIN YLS7-RELATED Chr3_EL10_PGA_scaffold7 + View
Camellia sinensis var. sinensis CSS0027272 hypothetical protein POPTR_0015s14330g [Populus trichocarpa] Chr7 + View
Corylus avellana Haze_13823 Similar to TBL18: Protein trichome birefringence-like 18 (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc02_g03880 TRICHOME BIREFRINGENCE-LIKE 18 chr2 + View
Citrus clementina Ciclev10004704m.g scaffold_9 - View
Cardamine hirsuta CARHR264410 Protein trichome birefringence-like 18 Chr8 - View
Cardamine hirsuta CARHR232770 Protein trichome birefringence-like 18 Chr7 + View
Carya illinoinensis CiPaw.03G097100 PTHR32285//PTHR32285:SF18 - FAMILY NOT NAMED // PROTEIN YLS7-RELATED Chr03 + View
Corchorus olitorius COL.COLO4_14182 hypothetical protein AWUE01015387.1 - View
Carica papaya Cpa.g.sc3.269 supercontig_3 + View
Chenopodium quinoa AUR62016101 TBL18: Protein trichome birefringence-like 18 C_Quinoa_Scaffold_3256 + View
Chenopodium quinoa AUR62035049 TBL18: Protein trichome birefringence-like 18 C_Quinoa_Scaffold_1130 + View
Capsella rubella Carub.0007s1565 PTHR32285//PTHR32285:SF18 - FAMILY NOT NAMED // PROTEIN YLS7-RELATED scaffold_7 - View
Daucus carota DCAR_018127 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_014611 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_020223 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv28532 GWHABJS00000004 + View
Durio zibethinus Duzib084G0306 NW_019167827.1 + View
Durio zibethinus Duzib068G1245 NW_019167838.1 + View
Durio zibethinus Duzib205G1439 NW_019168381.1 - View
Erigeron canadensis ECA233G3579 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.K00144 Chr11 + View
Erythranthe guttata Migut.F00427 scaffold_6 + View
Eutrema salsugineum Thhalv10024876m.g PTHR32285:SF18 - PROTEIN YLS7-RELATED scaffold_1 - View
Eutrema salsugineum Thhalv10013411m.g PTHR32285:SF18 - PROTEIN YLS7-RELATED scaffold_2 + View
Fragaria x ananassa FAN03G2596 PTHR32285:SF18 - PROTEIN YLS7-RELATED Fvb7-3 + View
Fragaria x ananassa FAN03G0263 PTHR32285:SF18 - PROTEIN YLS7-RELATED Fvb7-3 + View
Fragaria x ananassa FAN10G0393 PTHR32285:SF18 - PROTEIN YLS7-RELATED Fvb7-1 - View
Fragaria vesca FvH4_7g28200 PTHR32285:SF18 - PROTEIN YLS7-RELATED Fvb7 - View
Gossypium hirsutum Gohir.A07G039600 PTHR32285//PTHR32285:SF18 - FAMILY NOT NAMED // PROTEIN YLS7-RELATED A07 - View
Gossypium hirsutum Gohir.D12G264200 PTHR32285//PTHR32285:SF18 - FAMILY NOT NAMED // PROTEIN YLS7-RELATED D12 + View
Gossypium hirsutum Gohir.D07G043700 PTHR32285//PTHR32285:SF18 - FAMILY NOT NAMED // PROTEIN YLS7-RELATED D07 - View
Gossypium hirsutum Gohir.A12G264000 PTHR32285//PTHR32285:SF18 - FAMILY NOT NAMED // PROTEIN YLS7-RELATED A12 + View
Glycine max Glyma.20G212000 PTHR32285//PTHR32285:SF18 - FAMILY NOT NAMED // PROTEIN YLS7-RELATED Gm20 + View
Glycine max Glyma.10G178200 PTHR32285//PTHR32285:SF18 - FAMILY NOT NAMED // PROTEIN YLS7-RELATED Gm10 - View
Gossypium raimondii Gorai.001G046700 Chr01 - View
Gossypium raimondii Gorai.008G283500 Chr08 + View
Hydrangea macrophylla Hma1.2p1_0654F.1_g196390 Hma1.2p1_0654F.1 + View
Hydrangea macrophylla Hma1.2p1_0099F.1_g048860 Hma1.2p1_0099F.1 + View
Lotus japonicus Lj2g0001055 PTHR32285:SF18 - PROTEIN YLS7-RELATED chr2 + View
Lonicera japonica Lj8A36G59 GWHAAZE00000008 + View
Lonicera japonica Lj1A984T88 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_8_8140 PTHR32285:SF18 - PROTEIN YLS7-RELATED Lsat_1_v8_lg_8 + View
Malus domestica MD01G1185900 TRICHOME BIREFRINGENCE-LIKE 18 Chr01 - View
Malus domestica MD07G1258100 TRICHOME BIREFRINGENCE-LIKE 18 Chr07 - View
Manihot esculenta Manes.06G138100 Chromosome06 - View
Manihot esculenta Manes.14G033000 Chromosome14 + View
Nicotiana tabacum Nitab4.5_0000072g0350 PMR5 N-terminal domain, PC-Esterase Nitab4.5_0000072 - View
Olea europaea Oeu022509.1 chr1 - View
Olea europaea Oeu042586.1 chr12 - View
Petunia axillaris Peaxi162Scf01372g00043 TRICHOME BIREFRINGENCE-LIKE 18 Peaxi162Scf01372 - View
Punica granatum PGR142G2566 NC_045128.1 + View
Prunus persica Prupe.2G282500 Pp02 - View
Phaseolus vulgaris Phvul.007G111400 PTHR32285:SF18 - PROTEIN YLS7-RELATED Chr07 - View
Quercus lobata QL12p039478 12 - View
Rosa chinensis RcHm_v2.0_Chr1g0375151 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim09G0193600 chr09 + View
Striga asiatica SGA_v2.0_scaffold2G01136 scaffold2 + View
Salvia bowleyana SalBow4G1388 GWHASIU00000008 + View
Salix brachista Sabra15G0144600 GWHAAZH00000015 - View
Salix brachista Sabra12G0097600 GWHAAZH00000012 - View
Simmondsia chinensis Sc19g0001850 GWHAASQ00000019 + View
Solanum lycopersicum Solyc03g007120.3 Protein trichome birefringence-like 18 (AHRD V3.3 *** A0A2G3CVX7_CAPCH) SL4.0ch03 + View
Schrenkiella parvula Sp7g23380 PTHR32285//PTHR32285:SF18 - FAMILY NOT NAMED // PROTEIN YLS7-RELATED ch7-4 + View
Schrenkiella parvula Sp6g13850 PTHR32285:SF18 - PROTEIN YLS7-RELATED ch6-6 - View
Solanum pennellii Sopen03g003110 Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff, Wolf Scheible, 2010, personal communication). | TRICHOME BIREFRINGENCE-LIKE 18 | INVOLVED IN: biological_process unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant | BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400031026 Yellow-leaf-specific gene 7 ST4.03ch03 - View
Selenicereus undatus Hund11794 Scaffold_33679 + View
Selenicereus undatus Hund04639 Scaffold_19641 - View
Theobroma cacao Thecc.03G161700 Trichome birefringence-like 18 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104811508 protein trichome birefringence-like 18 NW_010965372.1 + View
Trifolium pratense TPR.G10658 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI39G0066 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NC_052250.1 - View
Tripterygium wilfordii TWI14G1151 NC_052249.1 - View
Vaccinium macrocarpon vmacro09886 Similar to TBL18: Protein trichome birefringence-like 18 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G2641 CM024071.1 - View
Vitis vinifera GSVIVG01018511001 chr16 - View