Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Potri.002G024601 PTHR12709//PTHR12709:SF5 - DNA-DIRECTED RNA POLYMERASE II, III // DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43 Chr02 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G5890 LG-4 - View
Acer truncatum Atru.chr13.322 chr13 - View
Actinidia chinensis Actinidia28598 Lachesis_group27 + View
Actinidia chinensis Actinidia37925 Lachesis_group7 + View
Actinidia chinensis Actinidia15407 Lachesis_group26 - View
Arabidopsis lyrata AL2G35650 scaffold_2 - View
Avicennia marina MSTRG.1208 ScioBoG_102833_HRSCAF_103052 - View
Arabidopsis thaliana AT1G75670 DNA-directed RNA polymerase DNA-directed RNA polymerases%3B FUNCTIONS IN: DNA-directed RNA polymerase activity%3B INVOLVED IN: transcription%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb7%2C N-terminal (InterPro:IPR005576)%3B Has 67 Blast hits to 67 proteins in 26 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 6%3B Plants - 48%3B Viruses - 0%3B Other Eukaryotes - 13 (source: NCBI BLink). DNA-directed RNA polymerases%3B FUNCTIONS IN: DNA-directed RNA polymerase activity%3B INVOLVED IN: transcription%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA polymerase Rpb7%2C N-terminal (InterPro:IPR005576)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC08g47055 ChrC08 + View
Brassica napus A02p20120 A02 - View
Brassica napus C02p33810 C02 + View
Brassica oleracea BolC2t09323H C2 - View
Brassica oleracea BolC6t40000H C6 - View
Brassica rapa BraA02t07047Z A02 - View
Beta vulgaris EL10Ac1g02264 PTHR12709//PTHR12709:SF5 - DNA-DIRECTED RNA POLYMERASE II, III // DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43 Chr1_EL10_PGA_scaffold3 + View
Camellia sinensis var. sinensis CSS0031211 PREDICTED: uncharacterized protein LOC100264366 [Vitis vinifera] Contig61 + View
Corylus avellana Haze_22610 Protein of unknown function 3 + View
Coffea canephora Cc10_g01890 DNA-directed RNA polymerases chr10 - View
Citrus clementina Ciclev10002352m.g scaffold_5 + View
Ceratophyllum demersum CDE05G3598 3 - View
Carpinus fangiana Cfa013928 Cfa05 + View
Cardamine hirsuta CARHR069060 DNA-directed RNA polymerase Chr2 - View
Carya illinoinensis CiPaw.08G064600 PTHR12709:SF5 - DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43 Chr08 + View
Citrullus lanatus ClCG05G018480 DNA-directed RNA polymerase I subunit rpa43-like protein CG_Chr05 - View
Cucumis melo MELO3C003766.2 DNA-directed RNA polymerase I subunit rpa43 chr04 - View
Carica papaya Cpa.g.sc26.26 supercontig_26 + View
Chenopodium quinoa AUR62035728 Protein of unknown function C_Quinoa_Scaffold_2733 + View
Chenopodium quinoa AUR62035440 Protein of unknown function C_Quinoa_Scaffold_2775 + View
Capsella rubella Carub.0002s2250 PTHR12709//PTHR12709:SF5 - DNA-DIRECTED RNA POLYMERASE II, III // DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43 scaffold_2 - View
Cucumis sativus L. CsaV3_3G045700 DNA-directed RNA polymerase I subunit RPA43 chr3 + View
Davidia involucrata Dinv31828 GWHABJS00000002 + View
Davidia involucrata Dinv39502 GWHABJS00000011 + View
Durio zibethinus Duzib116G0591 NW_019167949.1 - View
Erythranthe guttata Migut.C00815 scaffold_3 - View
Gossypium hirsutum Gohir.D02G097900 PTHR12709//PTHR12709:SF5 - DNA-DIRECTED RNA POLYMERASE II, III // DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43 D02 + View
Gossypium raimondii Gorai.005G111600 Chr05 + View
Hydrangea macrophylla Hma1.2p1_0638F.1_g193670 Hma1.2p1_0638F.1 + View
Lonicera japonica Lj4A795G31 GWHAAZE00000004 + View
Magnolia biondii MBI05_g38365_MAGBIO AED:0.29 Chr05 + View
Manihot esculenta Manes.05G149800 Chromosome05 - View
Nelumbo nucifera Nn5g29279 chr5 + View
Punica granatum PGR031G1064 NC_045127.1 - View
Papaver somniferum PSO675G8856 NC_039358.1 + View
Quercus lobata QL02p011069 CM012294 + View
Rhododendron simsii Rhsim06G0023300 chr06 - View
Striga asiatica SGA_v2.0_scaffold11G05895 scaffold11 + View
Salvia bowleyana SalBow8G2430 GWHASIU00000004 - View
Salix brachista Sabra05G0183100 GWHAAZH00000005 + View
Simmondsia chinensis Sc02g0008460 GWHAASQ00000002 + View
Sechium edule Sed0021847 LG13 + View
Sechium edule Sed0010580 LG01 + View
Trochodendron aralioides TAR625G0428 group4 - View
Trochodendron aralioides TAR381G0914 group11 - View
Theobroma cacao Thecc.08G041400 DNA-directed RNA polymerases Chromosome_8 + View
Vaccinium macrocarpon vmacro21713 Similar to rpa43: Probable DNA-directed RNA polymerase I subunit RPA43 (Dictyostelium discoideum OX%3D44689) chr10_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01009867001 chr18 + View