Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Potri.001G141200 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED Chr01 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G650 LG-6 + View
Acer truncatum Atru.chr6.1676 chr6 - View
Actinidia chinensis Actinidia25972 Lachesis_group22 - View
Arabidopsis lyrata AL7G36610 scaffold_7 + View
Amaranthus hybridus Ah.12g055160 E3 ubiquitin-protein ligase Os04g0590900 (EC 2.3.2.27) (RING-H2 finger protein Os04g0590900) (RING-type E3 ubiquitin transferase Os04g0590900) AmaHy_arrow1_Scaffold_12 + View
Aquilegia oxysepala Aqoxy3G02320 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3ZX127 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DABQ5X K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT4G17905 RING/U-box superfamily protein Putative RING-H2 finger protein ATL4H. ATL4H%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 16 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G03550.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Brassica napus A01p09960 A01 - View
Brassica napus C01p11760 C01 - View
Brassica oleracea BolC1t01137H C1 - View
Brassica rapa BraA01t00940Z A01 - View
Beta vulgaris EL10Ac5g12091 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED Chr5_EL10_PGA_scaffold2 - View
Camellia sinensis var. sinensis CSS0001119 PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera] Chr4 - View
Cannabis sativa CANSAT21G2419 NC_044374.1 + View
Cicer arietinum L. Ca_25201_v3 Ca_LG8_v3 - View
Coffea canephora Cc08_g02930 Putative E3 ubiquitin-protein ligase Os04g0590900 chr8 + View
Ceratophyllum demersum CDE11G0093 9 + View
Ceratophyllum demersum CDE03G0229 12 + View
Carya illinoinensis CiPaw.12G064700 PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Chr12 + View
Carya illinoinensis CiPaw.11G094700 PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Chr11 + View
Cucumis melo MELO3C003420.2 Ring finger protein, putative chr04 + View
Corchorus olitorius COL.COLO4_17005 Zinc finger%2C RING-type AWUE01016274.1 - View
Chenopodium quinoa AUR62018702 Os04g0590900: E3 ubiquitin-protein ligase Os04g0590900 C_Quinoa_Scaffold_1817 - View
Capsella rubella Carub.0007s2344 PTHR14155//PTHR14155:SF159 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED scaffold_7 + View
Cucumis sativus L. CsaV3_3G049060 RING-H2 finger protein chr3 - View
Daucus carota DCAR_008255 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_004293 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv28968 GWHABJS00000003 + View
Davidia involucrata Dinv25226 GWHABJS00000017 + View
Durio zibethinus Duzib205G1956 NW_019168381.1 - View
Erigeron canadensis ECA240G4213 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA246G4610 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.E00274 Chr05 - View
Eucalyptus grandis Eucgr.D02208 Chr04 + View
Fragaria x ananassa FAN08G3090 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED Fvb5-3 - View
Fragaria x ananassa FAN04G0195 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED Fvb5-4 - View
Fragaria x ananassa FAN13G1949 PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Fvb5-2 - View
Fragaria x ananassa FAN18G3170 PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Fvb5-1 + View
Fragaria x ananassa FAN18G0193 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED Fvb5-1 - View
Fragaria vesca FvH4_5g22340 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED Fvb5 + View
Gossypium hirsutum Gohir.A12G207900 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED A12 - View
Gossypium hirsutum Gohir.A11G031100 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED A11 + View
Gossypium hirsutum Gohir.D12G210400 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED D12 - View
Gossypium hirsutum Gohir.D11G029800 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED D11 + View
Glycine max Glyma.08G271100 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED Gm08 - View
Glycine max Glyma.01G017300 PTHR14155//PTHR14155:SF87 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm01 - View
Glycine max Glyma.09G205600 PTHR14155//PTHR14155:SF87 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Gm09 + View
Gossypium raimondii Gorai.007G032600 Chr07 + View
Gossypium raimondii Gorai.008G225900 Chr08 - View
Helianthus annuus HanXRQChr03g0083641 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr03 - View
Helianthus annuus HanXRQChr17g0536181 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr17 - View
Helianthus annuus HanXRQChr06g0167581 Probable RING/U-box superfamily protein HanXRQChr06 + View
Lupinus albus Lalb_Chr05g0215961 PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Lalb_Chr05 - View
Lotus japonicus Lj2g0017856 PTHR14155//PTHR14155:SF87 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED chr2 - View
Lotus japonicus Lj4g0021025 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED chr4 + View
Lonicera japonica Lj8C303G5 GWHAAZE00000008 + View
Lonicera japonica Lj2P237T12 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_6_80401 PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Lsat_1_v8_lg_6 + View
Lactuca sativa Lsat_1_v5_gn_3_18520 PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Lsat_1_v8_lg_3 + View
Magnolia biondii MBI04_g33880_MAGBIO AED:0.00 Chr04 + View
Malus domestica MD06G1035800 RING/U-box superfamily protein Chr06 + View
Manihot esculenta Manes.17G010100 Chromosome17 + View
Medicago truncatula Medtr5g030010 RING-H2 zinc finger protein chr5 - View
Medicago truncatula Medtr8g066780 anaphase-promoting complex subunit 11 RING-H2 finger protein chr8 - View
Nelumbo nucifera Nn1g00126 chr1 + View
Nelumbo nucifera Nn6g33570 chr6 - View
Nicotiana tabacum Nitab4.5_0000256g0140 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0000256 - View
Oryza sativa ssp. japonica Os02g0692000 Similar to RING finger family protein. chr02 - View
Petunia axillaris Peaxi162Scf00185g00042 RING/U-box superfamily protein Peaxi162Scf00185 + View
Petunia axillaris Peaxi162Scf00236g00023 RING/U-box superfamily protein Peaxi162Scf00236 + View
Punica granatum PGR042G2532 NC_045130.1 - View
Prunus persica Prupe.5G033900 Pp05 - View
Pisum sativum Psat2g137120 Ring finger domain chr2LG1 + View
Pisum sativum Psat4g121760 Ring finger domain chr4LG4 + View
Phaseolus vulgaris Phvul.002G140300 PTHR14155//PTHR14155:SF87 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr02 - View
Phaseolus vulgaris Phvul.003G284600 PTHR14155:SF94 - RING-H2 FINGER PROTEIN ATL33-RELATED Chr03 - View
Quercus lobata QL12p004909 12 - View
Rosa chinensis RcHm_v2.0_Chr7g0210051 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim11G0016600 chr11 + View
Salix brachista Sabra01G0109800 GWHAAZH00000001 - View
Salix brachista Sabra03G0062500 GWHAAZH00000003 + View
Simmondsia chinensis Sc22g0001630 GWHAASQ00000022 - View
Sechium edule Sed0023638 LG05 + View
Sechium edule Sed0008071 LG01 + View
Solanum lycopersicum Solyc08g076830.1 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LC40_ARTAN) SL4.0ch08 - View
Solanum lycopersicum Solyc06g061250.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1LC40_ARTAN) SL4.0ch06 + View
Schrenkiella parvula Sp7g16200 PTHR14155//PTHR14155:SF159 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED ch7-4 + View
Solanum pennellii Sopen06g021450 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch06 + View
Solanum pennellii Sopen08g025350 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch08 - View
Solanum tuberosum PGSC0003DMG400017520 Ring finger protein ST4.03ch08 - View
Solanum tuberosum PGSC0003DMG400007669 Ring finger protein ST4.03ch06 + View
Trochodendron aralioides TAR629G1102 group0 - View
Trochodendron aralioides TAR375G0111 group15 - View
Theobroma cacao Thecc.03G225600 RING/U-box superfamily protein Chromosome_3 - View
Trifolium pratense TPR.G3340 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI81G0839 NC_052251.1 + View
Vaccinium macrocarpon vmacro00320 Similar to Os04g0590900: E3 ubiquitin-protein ligase Os04g0590900 (Oryza sativa subsp. japonica OX%3D39947) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G0149 CM024074.1 - View
Vanilla planifolia HPP92_014650 RING/U-box superfamily protein *-* CM028156.1 + View
Vanilla planifolia HPP92_014616 ATL RING-H2 finger protein *-* CM028156.1 + View
Vitis vinifera GSVIVG01013145001 chr2 + View