Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Phvul.008G128400 Chr08 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G4870 LG-9 + View
Actinidia chinensis Actinidia09478 Lachesis_group15 + View
Actinidia chinensis Actinidia23720 Lachesis_group9 + View
Arabidopsis lyrata AL3G40740 scaffold_3 + View
Arabidopsis thaliana AT3G25030 RING/U-box superfamily protein RING/U-box superfamily protein%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G13100.1)%3B Has 841 Blast hits to 830 proteins in 153 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 404%3B Fungi - 82%3B Plants - 212%3B Viruses - 11%3B Other Eukaryotes - 132 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT3G07120 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G13100.1)%3B Has 4823 Blast hits to 3962 proteins in 332 species: Archae - 7%3B Bacteria - 109%3B Metazoa - 2197%3B Fungi - 776%3B Plants - 509%3B Viruses - 121%3B Other Eukaryotes - 1104 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC06g35767 ChrC06 + View
Brassica napus BNapus_Darmor_BZH_scaffold_109p00230 BNapus_Darmor_BZH_scaffold_109 - View
Brassica napus A07p07320 A07 - View
Brassica oleracea BolC7t41581H C7 - View
Brassica rapa BraA07t28521Z A07 - View
Camellia sinensis var. sinensis CSS0005639 PREDICTED: uncharacterized protein LOC100852917 [Vitis vinifera] Chr11 - View
Corylus avellana Haze_24814 Protein of unknown function 8 + View
Coffea canephora Cc01_g16900 Putative RING/U-box superfamily protein chr1 - View
Citrus clementina Ciclev10020442m.g scaffold_3 - View
Cardamine hirsuta CARHR218570 RING/U-box superfamily protein Chr7 - View
Cardamine hirsuta CARHR101310 RING/U-box superfamily protein Chr3 + View
Cardamine hirsuta CARHR081720 RING/U-box superfamily protein Chr3 + View
Carya illinoinensis CiPaw.04G104800 PTHR12183//PTHR12183:SF11 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // C3HC4 TYPE RING-FINGER PROTEIN-RELATED Chr04 - View
Carica papaya Cpa.g.sc8.141 supercontig_8 - View
Capsella rubella Carub.0003s2535 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED scaffold_3 + View
Cucumis sativus L. CsaV3_7G026120 Zinc finger, RING-type chr7 + View
Daucus carota DCAR_012653 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_000524 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv19192 GWHABJS00000010 - View
Davidia involucrata Dinv12677 GWHABJS00000007 + View
Durio zibethinus Duzib138G0369 NW_019167893.1 + View
Durio zibethinus Duzib211G0659 NW_019168049.1 + View
Durio zibethinus Duzib133G0221 NW_019167938.1 + View
Erigeron canadensis ECA247G1755 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.K02149 Chr11 - View
Eucalyptus grandis Eucgr.H00794 Chr08 - View
Erythranthe guttata Migut.N00622 scaffold_14 + View
Eutrema salsugineum Thhalv10002955m.g PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED scaffold_4 - View
Eutrema salsugineum Thhalv10021010m.g PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED scaffold_13 - View
Fragaria x ananassa FAN24G3558 PTHR12183//PTHR12183:SF17 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Fvb2-2 + View
Fragaria x ananassa FAN15G0104 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED Fvb2-4 - View
Fragaria x ananassa FAN27G2175 PTHR12183//PTHR12183:SF17 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Fvb2-1 - View
Fragaria vesca FvH4_2g18810 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED Fvb2 - View
Gossypium hirsutum Gohir.A11G138800 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED A11 + View
Gossypium hirsutum Gohir.D07G163600 PTHR12183//PTHR12183:SF17 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // SUBFAMILY NOT NAMED D07 + View
Gossypium hirsutum Gohir.A07G200700 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED A07 - View
Gossypium hirsutum Gohir.D11G145000 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED D11 + View
Gossypium hirsutum Gohir.D07G207000 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED D07 - View
Gossypium hirsutum Gohir.A07G157300 PTHR12183//PTHR12183:SF17 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // SUBFAMILY NOT NAMED A07 + View
Glycine max Glyma.08G350900 PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Gm08 + View
Glycine max Glyma.16G094800 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED Gm16 + View
Glycine max Glyma.18G165000 PTHR12183 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN Gm18 - View
Glycine max Glyma.03G079200 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED Gm03 - View
Gossypium raimondii Gorai.007G155500 Chr07 + View
Gossypium raimondii Gorai.001G233400 Chr01 - View
Gossypium raimondii Gorai.001G187400 Chr01 + View
Helianthus annuus HanXRQChr01g0015191 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr01 + View
Helianthus annuus HanXRQChr10g0279391 Probable RING/U-box superfamily protein HanXRQChr10 + View
Lupinus albus Lalb_Chr19g0125691 PTHR12183//PTHR12183:SF17 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr19 + View
Lotus japonicus Lj1g0000938 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED chr1 + View
Lotus japonicus Lj3g0020669 PTHR12183//PTHR12183:SF11 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // C3HC4 TYPE RING-FINGER PROTEIN-RELATED chr3 + View
Lonicera japonica Lj2P1129T2 GWHAAZE00000002 - View
Lonicera japonica Lj1C87T6 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_9_12420 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED Lsat_1_v8_lg_9 + View
Lactuca sativa Lsat_1_v5_gn_5_180460 PTHR12183//PTHR12183:SF17 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_5 - View
Magnolia biondii MBI11_g07425_MAGBIO AED:0.01 Chr11 - View
Malus domestica MD10G1163000 RING/U-box superfamily protein Chr10 - View
Malus domestica MD05G1174100 RING/U-box superfamily protein Chr05 - View
Manihot esculenta Manes.13G047000 Chromosome13 - View
Manihot esculenta Manes.12G045900 Chromosome12 + View
Medicago truncatula Medtr8g013650 zinc finger, C3HC4 type (RING finger) protein chr8 + View
Punica granatum PGR083G0087 NC_045133.1 - View
Punica granatum PGR044G0977 NC_045134.1 + View
Prunus persica Prupe.8G201500 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED Pp08 - View
Pisum sativum Psat3g147400 Zinc finger + C3HC4 type (RING finger) chr3LG5 + View
Populus trichocarpa Potri.002G243800 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED Chr02 + View
Quercus lobata QL09p053337 9 - View
Rosa chinensis RcHm_v2.0_Chr6g0284561 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim01G0255300 chr01 - View
Striga asiatica SGA_v2.0_scaffold6G03233 scaffold6 - View
Salix brachista Sabra02G0185500 GWHAAZH00000002 + View
Simmondsia chinensis Sc05g0002060 GWHAASQ00000005 - View
Schrenkiella parvula Sp3g06060 PTHR12183:SF11 - C3HC4 TYPE RING-FINGER PROTEIN-RELATED ch3-1 + View
Schrenkiella parvula Sp3g22610 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 ch3-2 + View
Trochodendron aralioides TAR365G1192 group16 - View
Trochodendron aralioides TAR362G0559 group17 + View
Tarenaya hassleriana THA.LOC104822500 uncharacterized protein LOC104822500 NW_010966665.1 - View
Tarenaya hassleriana THA.LOC104818961 uncharacterized protein LOC104818961 NW_010966177.1 + View
Tripterygium wilfordii TWI75G1482 NC_052253.1 - View
Tripterygium wilfordii TWI36G1781 NC_052237.1 - View
Tripterygium wilfordii TWI18G0295 NC_052241.1 + View
Vaccinium macrocarpon vmacro14748 Protein of unknown function chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0331G0748 CM024078.1 + View
Vigna mungo VMungo1383G0185 CM024070.1 - View