Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Phvul.002G329300 PTHR10891//PTHR10891:SF608 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr02 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G3080 LG-2 - View
Acer truncatum Atru.chr9.1744 chr9 + View
Arabidopsis lyrata AL2G33410 scaffold_2 + View
Avicennia marina MSTRG.4573 ScioBoG_102837_HRSCAF_103074 + View
Arabidopsis thaliana AT5G37770 EF hand calcium-binding protein family Encodes a protein with 40%25 similarity to calmodulin. Binds Ca(2+) and%2C as a consequence%2C undergoes conformational changes. CML24 expression occurs in all major organs%2C and transcript levels are increased from 2- to 15-fold in plants subjected to touch%2C darkness%2C heat%2C cold%2C hydrogen peroxide%2C abscisic acid (ABA)%2C and indole-3-acetic acid. However%2C CML24 protein accumulation changes were not detectable. The putative CML24 regulatory region confers reporter expression at sites of predicted mechanical stress%3B in regions undergoing growth%3B in vascular tissues and various floral organs%3B and in stomata%2C trichomes%2C and hydathodes. CML24-underexpressing transgenics are resistant to ABA inhibition of germination and seedling growth%2C are defective in long-day induction of flowering%2C and have enhanced tolerance to CoCl(2)%2C molybdic acid%2C ZnSO(4)%2C and MgCl(2). Also regulates nitric oxide levels. TOUCH 2 (TCH2)%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: in 13 processes%3B LOCATED IN: plasma membrane%2C actin cytoskeleton%3B EXPRESSED IN: 34 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand (InterPro:IPR018248)%3B BEST Arabidopsis thaliana protein match is: calmodulin like 23 (TAIR:AT1G66400.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT1G73630 EF hand calcium-binding protein family EF hand calcium-binding protein family%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand (InterPro:IPR018248)%3B BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G18210.2)%3B Has 22917 Blast hits to 14772 proteins in 1512 species: Archae - 2%3B Bacteria - 123%3B Metazoa - 7738%3B Fungi - 5792%3B Plants - 5797%3B Viruses - 0%3B Other Eukaryotes - 3465 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB03g12048 ChrB03 + View
Brassica carinata BcaB03g15068 ChrB03 + View
Brassica carinata BcaB07g31819 ChrB07 + View
Brassica carinata BcaC08g46783 ChrC08 + View
Brassica carinata BcaC05g25716 ChrC05 - View
Brassica napus C06p47750 C06 + View
Brassica napus C08p18480 C08 - View
Brassica oleracea BolC6t39813H C6 + View
Brassica rapa BraA06t24554Z A06 - View
Brassica rapa BraA07t31499Z A07 + View
Camellia sinensis var. sinensis CSS0023028 PREDICTED: calcium-binding allergen Ole e 8-like [Nicotiana tomentosiformis] Chr2 - View
Camellia sinensis var. sinensis CSS0002278 PREDICTED: calcium-binding allergen Ole e 8-like [Solanum tuberosum] Chr15 + View
Cicer arietinum L. Ca_17196_v3 Ca_LG6_v3 + View
Cicer arietinum L. Ca_25313_v3 Ca_LG8_v3 + View
Corylus avellana Haze_18836 Similar to CML27: Probable calcium-binding protein CML27 (Arabidopsis thaliana OX%3D3702) 7 - View
Corylus avellana Haze_14236 Similar to CML23: Probable calcium-binding protein CML23 (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc04_g06360 Calcium-binding allergen Ole e 8 chr4 + View
Citrus clementina Ciclev10009740m.g scaffold_1 + View
Carpinus fangiana Cfa007829 Cfa03 - View
Carpinus fangiana Cfa019671 Cfa08 + View
Cardamine hirsuta CARHR066680 Calmodulin 24-like protein Chr2 + View
Carya illinoinensis CiPaw.15G142300 PTHR10891//PTHR10891:SF605 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALCIUM-BINDING PROTEIN CML25-RELATED Chr15 - View
Citrullus lanatus ClCG06G014370 Calmodulin 24-like protein CG_Chr06 + View
Cucumis melo MELO3C017353.2 Calcium binding protein chr02 + View
Carica papaya Cpa.g.sc3.406 supercontig_3 + View
Capsella rubella Carub.0002s2037 PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED scaffold_2 + View
Davidia involucrata Dinv19020 GWHABJS00000014 + View
Eucalyptus grandis Eucgr.B00943 Chr02 - View
Eutrema salsugineum Thhalv10019258m.g PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED scaffold_9 - View
Fragaria vesca FvH4_5g17240 PTHR10891//PTHR10891:SF605 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALCIUM-BINDING PROTEIN CML25-RELATED Fvb5 - View
Gossypium hirsutum Gohir.A12G268900 PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED A12 - View
Gossypium hirsutum Gohir.D12G269301 PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED D12 - View
Glycine max Glyma.08G053500 PTHR10891:SF573 - CALCIUM-BINDING PROTEIN CML24-RELATED Gm08 - View
Glycine max Glyma.07G101100 PTHR10891//PTHR10891:SF608 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Gm07 + View
Gossypium raimondii Gorai.008G289600 Chr08 - View
Lupinus albus Lalb_Chr09g0330421 PTHR10891//PTHR10891:SF573 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALCIUM-BINDING PROTEIN CML24-RELATED Lalb_Chr09 + View
Lotus japonicus Lj2g0002413 PTHR10891//PTHR10891:SF608 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED chr2 - View
Lotus japonicus Lj6g0006683 PTHR10891//PTHR10891:SF573 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALCIUM-BINDING PROTEIN CML24-RELATED chr6 + View
Lonicera japonica Lj9P420T29 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_8_41821 PTHR10891:SF605 - CALCIUM-BINDING PROTEIN CML25-RELATED Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_4_15740 PTHR10891:SF605 - CALCIUM-BINDING PROTEIN CML25-RELATED Lsat_1_v8_lg_4 - View
Malus domestica MD06G1231000 Calcium-binding EF-hand family protein Chr06 - View
Manihot esculenta Manes.14G170600 Chromosome14 - View
Manihot esculenta Manes.01G116700 Chromosome01 + View
Manihot esculenta Manes.06G007600 Chromosome06 + View
Manihot esculenta Manes.02G075400 Chromosome02 + View
Medicago truncatula Medtr6g079570 EF hand calcium-binding family protein chr6 - View
Nelumbo nucifera Nn4g24202 chr4 + View
Nelumbo nucifera Nn3g18256 chr3 + View
Olea europaea Oeu031775.1 chr12 + View
Olea europaea Oeu046172.1 chr10 + View
Punica granatum PGR044G0209 NC_045134.1 + View
Punica granatum PGR083G1003 NC_045133.1 - View
Prunus persica Prupe.5G232300 PTHR10891:SF605 - CALCIUM-BINDING PROTEIN CML25-RELATED Pp05 - View
Pisum sativum Psat1g033200 EF-hand domain pair chr1LG6 - View
Papaver somniferum PSO017G4321 NC_039362.1 - View
Quercus lobata QL10p028410 10 - View
Rhododendron simsii Rhsim12G0138800 chr12 - View
Salix brachista Sabra04G0060000 GWHAAZH00000004 + View
Simmondsia chinensis Sc10g0009270 GWHAASQ00000010 + View
Simmondsia chinensis Sc12g0007170 GWHAASQ00000012 + View
Sechium edule Sed0000275 LG12 - View
Sechium edule Sed0026410 LG08 - View
Solanum lycopersicum Solyc03g118810.1 Calcium-binding allergen Ole e 8 (AHRD V3.3 *** A0A2G2WQF6_CAPBA) SL4.0ch03 + View
Solanum lycopersicum Solyc06g068960.1 Calcium-binding allergen Ole e 8 (AHRD V3.3 *** A0A2G2WLM3_CAPBA) SL4.0ch06 + View
Solanum pennellii Sopen03g037760 Calcium-binding EF-hand family protein | FUNCTIONS IN: calcium ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane, vacuole | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site , EF-HAND 2 , EF-hand-like domain , Calcium-binding EF-hand , EF-hand | BEST Arabidopsis thaliana protein match is: EF hand calcium-binding protein family Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400028797 Calcium-binding allergen Ole e 8 ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400005745 Calcium-binding allergen Ole e 8 ST4.03ch03 + View
Trochodendron aralioides TAR622G0250 group8 - View
Theobroma cacao Thecc.03G053900 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104812167 probable calcium-binding protein CML27 NW_010965372.1 - View
Tripterygium wilfordii TWI15G1116 NC_052247.1 - View
Tripterygium wilfordii TWI81G0515 NC_052251.1 + View
Vigna mungo VMungo0251G3734 CM024069.1 - View
Vigna mungo VMungo0464G2017 CM024077.1 - View
Vigna mungo VMungo0647G1008 CM024073.1 - View
Vitis vinifera GSVIVG01008421001 chr17 + View