Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
PGR142G3242 NC_045128.1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G13310 LG-10 + View
Acer truncatum Atru.chr6.2764 chr6 - View
Actinidia chinensis Actinidia10948 Lachesis_group19 - View
Actinidia chinensis Actinidia39517 Lachesis_group17 + View
Actinidia chinensis Actinidia11164 Lachesis_group5 - View
Arabidopsis lyrata AL4G41320 scaffold_4 + View
Arabidopsis lyrata AL5G40470 scaffold_5 + View
Avicennia marina MSTRG.6782 ScioBoG_102840_HRSCAF_103099 - View
Avicennia marina MSTRG.15084 ScioBoG_19538_HRSCAF_19626 - View
Amaranthus hybridus Ah.01g004920 60S ribosomal protein L11-2 (L16) AmaHy_arrow1_Scaffold_1 - View
Amaranthus hybridus Ah.01g015890 AmaHy_arrow1_Scaffold_1 + View
Arabidopsis thaliana AT3G58700 Ribosomal L5P family protein Ribosomal L5P family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic ribosome%2C cytosolic large ribosomal subunit%2C vacuole%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 (InterPro:IPR002132)%2C Ribosomal protein L5%2C conserved site (InterPro:IPR020929)%2C Ribosomal protein L5%2C N-terminal (InterPro:IPR020927)%2C Ribosomal protein L5%2C C-terminal (InterPro:IPR020928)%3B BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein (TAIR:AT5G45775.2)%3B Has 7854 Blast hits to 7854 proteins in 2814 species: Archae - 312%3B Bacteria - 5083%3B Metazoa - 254%3B Fungi - 163%3B Plants - 278%3B Viruses - 0%3B Other Eukaryotes - 1764 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB02g07511 ChrB02 + View
Brassica carinata BcaC07g40218 ChrC07 + View
Brassica carinata BcaC08g44938 ChrC08 + View
Brassica carinata BcaB07g30868 ChrB07 + View
Brassica carinata BcaC02g10023 ChrC02 + View
Brassica carinata BcaC07g40287 ChrC07 + View
Brassica napus A01p10750 A01 + View
Brassica napus C08p34020 C08 + View
Brassica napus A04p02410 A04 - View
Brassica napus A09p51230 A09 + View
Brassica napus C06p25660 C06 + View
Brassica oleracea BolC4t24948H C4 - View
Brassica oleracea BolC6t37729H C6 + View
Brassica oleracea BolC7t45498H C7 + View
Brassica oleracea BolC8t51001H C8 + View
Brassica rapa BraA01t01021Z A01 + View
Brassica rapa BraA04t15971Z A04 - View
Brassica rapa BraA09t40566Z A09 + View
Brassica rapa BraA03t14233Z A03 + View
Beta vulgaris EL10Ac9g20984 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0015183 hypothetical protein AMTR_s00025p00203150 [Amborella trichopoda] Chr7 + View
Camellia sinensis var. sinensis CSS0045621 60S ribosomal protein L11, putative [Ricinus communis] Chr8 + View
Coffea canephora Cc05_g08530 60S ribosomal protein L11 chr5 + View
Citrus clementina Ciclev10016875m.g scaffold_2 + View
Ceratophyllum demersum CDE10G1125 8 + View
Cardamine hirsuta CARHR169080 50S ribosomal protein L5 Chr5 + View
Cardamine hirsuta CARHR225580 50S ribosomal protein L5 Chr7 + View
Carya illinoinensis CiPaw.09G071700 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Chr09 + View
Citrullus lanatus ClCG07G002650 Ribosomal protein L11-like CG_Chr07 - View
Citrullus lanatus ClCG01G023830 60S ribosomal protein L11, putative CG_Chr01 + View
Citrullus lanatus ClCG03G007540 60S ribosomal protein L11 CG_Chr03 - View
Cucumis melo MELO3C002668.2 60S ribosomal protein L11 chr12 - View
Cucumis melo MELO3C007204.2 60S ribosomal protein L11-like chr08 - View
Carica papaya Cpa.g.sc52.157 supercontig_52 - View
Chenopodium quinoa AUR62024048 RPL11A: 60S ribosomal protein L11-1 C_Quinoa_Scaffold_3389 - View
Capsella rubella Carub.0005s2549 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) scaffold_5 + View
Capsella rubella Carub.0008s0221 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) scaffold_8 + View
Cucumis sativus L. CsaV3_6G051000 Ribosomal protein chr6 + View
Cucumis sativus L. CsaV3_1G033190 Ribosomal protein chr1 - View
Daucus carota DCAR_013278 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_009775 hypothetical protein DCARv2_Chr3 + View
Durio zibethinus Duzib235G1546 NW_019167982.1 - View
Durio zibethinus Duzib160G0289 NW_019168015.1 - View
Durio zibethinus Duzib192G0814 NW_019168037.1 + View
Erigeron canadensis ECA236G0880 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.A01929 Chr01 + View
Eutrema salsugineum Thhalv10006260m.g PTHR11994//PTHR11994:SF13 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED scaffold_19 - View
Fragaria x ananassa FAN16G0546 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb3-3 - View
Fragaria x ananassa FAN21G1492 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb3-2 - View
Fragaria x ananassa FAN11G0047 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb3-4 + View
Fragaria x ananassa FAN14G2161 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb6-1 + View
Fragaria x ananassa FAN02G3837 PTHR11994//PTHR11994:SF13 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb6-4 - View
Fragaria vesca FvH4_3g07450 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Fvb3 - View
Fragaria vesca FvH4_6g27670 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED Fvb6 - View
Gossypium hirsutum Gohir.D05G156900 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) D05 - View
Gossypium hirsutum Gohir.D10G036300 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) D10 - View
Gossypium hirsutum Gohir.D06G207000 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) D06 - View
Gossypium hirsutum Gohir.A10G035600 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) A10 - View
Gossypium hirsutum Gohir.A05G154100 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) A05 - View
Gossypium raimondii Gorai.009G161300 Chr09 - View
Gossypium raimondii Gorai.011G038200 Chr11 - View
Lonicera japonica Lj1A1174T74 GWHAAZE00000001 + View
Lonicera japonica Lj8C100G12 GWHAAZE00000008 - View
Lonicera japonica Lj1A677T62 GWHAAZE00000001 - View
Magnolia biondii MBI07_g09548_MAGBIO AED:0.02 Chr07 - View
Malus domestica MD17G1264500 Ribosomal L5P family protein Chr17 - View
Malus domestica MD09G1235900 Ribosomal L5P family protein Chr09 - View
Manihot esculenta Manes.17G058100 Chromosome17 + View
Manihot esculenta Manes.16G041800 Chromosome16 + View
Nicotiana tabacum Nitab4.5_0000249g0140 Ribosomal protein L5, Ribosomal protein L5 domain, Ribosomal protein L5, conserved site Nitab4.5_0000249 - View
Nicotiana tabacum Nitab4.5_0000537g0150 Ribosomal protein L5, Ribosomal protein L5, conserved site, Ribosomal protein L5 domain Nitab4.5_0000537 + View
Oryza sativa ssp. japonica Os06g0550000 Similar to 60S ribosomal protein L11. chr06 - View
Petunia axillaris Peaxi162Scf00469g00530 60S ribosomal protein L11-1 Peaxi162Scf00469 + View
Prunus persica Prupe.4G065200 Pp04 + View
Prunus persica Prupe.3G113800 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Pp03 - View
Populus trichocarpa Potri.011G068900 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) Chr11 + View
Quercus lobata QL08p042282 8 + View
Rosa chinensis RcHm_v2.0_Chr5g0011401 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim06G0129900 chr06 - View
Rhododendron simsii Rhsim04G0075900 chr04 + View
Rhododendron simsii Rhsim02G0145200 chr02 + View
Salvia bowleyana SalBow7G1038 GWHASIU00000005 + View
Salix brachista Sabra11G0049900 GWHAAZH00000011 + View
Simmondsia chinensis Sc21g0004090 GWHAASQ00000021 - View
Simmondsia chinensis Sc12g0003650 GWHAASQ00000012 + View
Sechium edule Sed0000237 LG01 + View
Sechium edule Sed0004754 LG04 - View
Sechium edule Sed0025716 LG05 - View
Solanum lycopersicum Solyc12g010930.2 60S ribosomal protein L11 (AHRD V3.3 *-* A0A2G2VRP4_CAPBA) SL4.0ch12 + View
Solanum lycopersicum Solyc07g055230.4 60S ribosomal protein L11 (AHRD V3.3 *-* A0A2G2VRP4_CAPBA) SL4.0ch07 + View
Solanum lycopersicum Solyc10g007980.3 60S ribosomal protein L11 (AHRD V3.3 *-* A0A2G2VRP4_CAPBA) SL4.0ch10 - View
Schrenkiella parvula Sp5g04150 K02868 - large subunit ribosomal protein L11e (RP-L11e, RPL11) ch5-1 - View
Schrenkiella parvula Sp7g17430 PTHR11994//PTHR11994:SF14 - 60S RIBOSOMAL PROTEIN L11-RELATED // SUBFAMILY NOT NAMED ch7-4 + View
Solanum pennellii Sopen12g006290 encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment. | ribosomal protein large subunit 16A (RPL16A) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 , Ribosomal protein L5, conserved site , Ribosomal protein L5, N-terminal , Ribosomal protein L5, C-terminal | BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein Spenn-ch12 + View
Solanum pennellii Sopen07g026990 encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment. | ribosomal protein large subunit 16A (RPL16A) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 , Ribosomal protein L5, conserved site , Ribosomal protein L5, N-terminal , Ribosomal protein L5, C-terminal | BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein Spenn-ch07 - View
Solanum pennellii Sopen10g003850 encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment. | ribosomal protein large subunit 16A (RPL16A) | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: cytosolic large ribosomal subunit, nucleolus, chloroplast, vacuole | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L5 , Ribosomal protein L5, conserved site , Ribosomal protein L5, N-terminal , Ribosomal protein L5, C-terminal | BEST Arabidopsis thaliana protein match is: Ribosomal L5P family protein Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400020434 Ribosomal protein L11 ST4.03ch07 + View
Solanum tuberosum PGSC0003DMG400007855 Ribosomal protein L11 ST4.03ch12 - View
Solanum tuberosum PGSC0003DMG402010558 Ribosomal protein L11 ST4.03ch10 - View
Trochodendron aralioides TAR629G0405 group0 + View
Trochodendron aralioides TAR624G0369 group9 + View
Trochodendron aralioides TAR627G0718 group6 + View
Theobroma cacao Thecc.06G167400 Chromosome_6 - View
Theobroma cacao Thecc.01G153400 Ribosomal L5P family protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104803021 60S ribosomal protein L11-1 NW_010960188.1 + View
Tripterygium wilfordii TWI59G0955 NC_052248.1 + View
Tripterygium wilfordii TWI23G0133 NC_052239.1 + View
Vaccinium macrocarpon vmacro09203 Similar to RPL11: 60S ribosomal protein L11 (Medicago sativa OX%3D3879) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro12386 Similar to RPL11A: 60S ribosomal protein L11-1 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01021244001 chr10 + View
Vitis vinifera GSVIVG01020743001 chr12 - View