Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Actinidia chinensis | Actinidia34446 | Lachesis_group15 | - | View | |
Actinidia chinensis | Actinidia23900 | Lachesis_group9 | + | View | |
Arabidopsis lyrata | AL3G20330 | scaffold_3 | - | View | |
Avicennia marina | MSTRG.10230 | ScioBoG_13798_HRSCAF_13862 | - | View | |
Arabidopsis thaliana | AT3G09220 | laccase 7 putative laccase%2C a member of laccase family of genes (17 members in Arabidopsis). laccase 7 (LAC7)%3B FUNCTIONS IN: laccase activity%3B INVOLVED IN: oxidation reduction%2C lignin catabolic process%3B LOCATED IN: endomembrane system%2C apoplast%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Multicopper oxidase%2C type 3 (InterPro:IPR011707)%2C Cupredoxin (InterPro:IPR008972)%2C Laccase (InterPro:IPR017761)%2C Multicopper oxidase%2C type 2 (InterPro:IPR011706)%2C Multicopper oxidase%2C copper-binding site (InterPro:IPR002355)%2C Multicopper oxidase%2C type 1 (InterPro:IPR001117)%3B BEST Arabidopsis thaliana protein match is: Laccase/Diphenol oxidase family protein (TAIR:AT5G01050.1)%3B Has 10354 Blast hits to 8703 proteins in 1520 species: Archae - 53%3B Bacteria - 4205%3B Metazoa - 505%3B Fungi - 3603%3B Plants - 1597%3B Viruses - 0%3B Other Eukaryotes - 391 (source: NCBI BLink). | Chr3 | - | View |
Corylus avellana | Haze_24205 | Similar to LAC17: Laccase-17 (Arabidopsis thaliana OX%3D3702) | 6 | + | View |
Cardamine hirsuta | CARHR083560 | laccase 7 | Chr3 | - | View |
Capsella rubella | Carub.0003s0833 | PTHR11709:SF9 - LACCASE-7-RELATED | scaffold_3 | - | View |
Erythranthe guttata | Migut.L01996 | scaffold_12 | + | View | |
Rhododendron simsii | Rhsim01G0234800 | chr01 | + | View | |
Salvia bowleyana | SalBow3G1460 | GWHASIU00000006 | + | View | |
Sechium edule | Sed0025446 | LG13 | + | View | |
Solanum lycopersicum | Solyc10g085090.3 | Laccase (AHRD V3.3 *** K4D3U3_SOLLC) | SL4.0ch10 | + | View |
Schrenkiella parvula | Sp3g07600 | PTHR11709:SF9 - LACCASE-7-RELATED | ch3-1 | - | View |
Solanum pennellii | Sopen10g034550 | Encodes a protein with similarity to putative laccase, a member of laccase family (17 members in Arabidopsis). Might be involved in cell wall biosynthesis. Mutants have a mild irregular xylem phenotype. | IRREGULAR XYLEM 12 (IRX12) | FUNCTIONS IN: laccase activity | INVOLVED IN: secondary cell wall biogenesis | LOCATED IN: endomembrane system, apoplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 , Laccase , Multicopper oxidase, type 2 , Cupredoxin , Multicopper oxidase, copper-binding site , Multicopper oxidase, type 1 | BEST Arabidopsis thaliana protein match is: laccase 10 | Spenn-ch10 | + | View |
Trochodendron aralioides | TAR636G1437 | group1 | + | View | |
Tarenaya hassleriana | THA.LOC104827034 | laccase-7-like | NW_010967707.1 | + | View |
Vaccinium macrocarpon | vmacro14578 | Similar to IRX12: Laccase-4 (Arabidopsis thaliana OX%3D3702) | chr7_Vaccinium_macrocarpon_Stevens_v1 | + | View |