Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Os01g0822800 Similar to RING-H2 finger protein ATL3C. chr01 - View
Os05g0478000 Zinc finger, RING/FYVE/PHD-type domain containing protein. chr05 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G11510 LG-5 - View
Aethionema arabicum Aa31LG3G3890 LG-3 - View
Acer truncatum Atru.chr12.176 chr12 + View
Actinidia chinensis Actinidia34494 Lachesis_group15 - View
Actinidia chinensis Actinidia33869 Lachesis_group3 + View
Arabidopsis lyrata AL6G10154 scaffold_6 - View
Amaranthus hybridus Ah.08g209440 AmaHy_arrow1_Scaffold_8 - View
Arabidopsis thaliana AT3G10910 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G05280.1)%3B Has 8963 Blast hits to 8935 proteins in 281 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2174%3B Fungi - 625%3B Plants - 4988%3B Viruses - 47%3B Other Eukaryotes - 1123 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G01880 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G10910.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR1127G124 AmTr_v1.0_scaffold00077 + View
Camellia sinensis var. sinensis CSS0048169 zinc finger family protein [Populus trichocarpa] Chr4 + View
Cannabis sativa CANSAT35G0415 NC_044378.1 - View
Cicer arietinum L. Ca_07759_v3 Ca_LG3_v3 + View
Corylus avellana Haze_17354 Similar to ATL72: RING-H2 finger protein ATL72 (Arabidopsis thaliana OX%3D3702) 11 + View
Corylus avellana Haze_21171 Similar to ATL72: RING-H2 finger protein ATL72 (Arabidopsis thaliana OX%3D3702) 10 + View
Coffea canephora Cc02_g05400 RING-H2 finger protein ATL72 chr2 - View
Coffea canephora Cc01_g15310 RING-H2 finger protein ATL73 chr1 + View
Citrus clementina Ciclev10013579m.g scaffold_6 + View
Citrus clementina Ciclev10032803m.g scaffold_4 + View
Ceratophyllum demersum CDE04G1355 2 - View
Carpinus fangiana Cfa017037 Cfa07 - View
Cardamine hirsuta CARHR085480 Ring finger protein, putative Chr3 - View
Cardamine hirsuta CARHR212230 Ring finger protein, putative Chr6 + View
Carya illinoinensis CiPaw.09G220900 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Chr09 + View
Carya illinoinensis CiPaw.01G306400 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Chr01 + View
Citrullus lanatus ClCG11G005680 Ring finger protein, putative CG_Chr11 - View
Cucumis melo MELO3C025221.2 RING-H2 finger protein ATL74 chr08 - View
Carica papaya Cpa.g.sc19.61 supercontig_19 - View
Chenopodium quinoa AUR62006389 ATL72: RING-H2 finger protein ATL72 C_Quinoa_Scaffold_1001 + View
Chenopodium quinoa AUR62029729 ATL72: RING-H2 finger protein ATL72 C_Quinoa_Scaffold_2858 + View
Cucumis sativus L. CsaV3_3G033140 RING-H2 finger protein ATL74-like chr3 - View
Daucus carota DCAR_015342 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv11359 GWHABJS00000015 + View
Davidia involucrata Dinv25338 GWHABJS00000012 + View
Davidia involucrata Dinv12279 GWHABJS00000007 + View
Davidia involucrata Dinv21844 GWHABJS00000004 - View
Davidia involucrata Dinv34480 GWHABJS00000009 - View
Durio zibethinus Duzib268G1668 NW_019168270.1 - View
Durio zibethinus Duzib151G0647 NW_019167904.1 - View
Durio zibethinus Duzib212G0890 NW_019168026.1 - View
Durio zibethinus Duzib168G2277 NW_019168159.1 + View
Erigeron canadensis ECA236G3767 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA232G3641 Conyza_canadensis_scaffold:2 + View
Erythranthe guttata Migut.F00605 scaffold_6 + View
Eutrema salsugineum Thhalv10014876m.g KOG2930 - SCF ubiquitin ligase, Rbx1 component scaffold_2 - View
Fragaria x ananassa FAN01G0201 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb7-4 - View
Fragaria x ananassa FAN05G4890 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb6-3 - View
Fragaria x ananassa FAN10G1034 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb7-1 + View
Fragaria x ananassa FAN05G5793 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb6-3 + View
Fragaria x ananassa FAN09G2450 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb6-2 + View
Fragaria x ananassa FAN14G0832 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Fvb6-1 + View
Fragaria x ananassa FAN02G1111 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED Fvb6-4 - View
Fragaria vesca FvH4_6g09940 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Fvb6 - View
Fragaria vesca FvH4_7g25880 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Fvb7 + View
Gossypium hirsutum Gohir.D10G115900 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED D10 - View
Gossypium hirsutum Gohir.D13G240950 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED D13 - View
Gossypium hirsutum Gohir.A13G235250 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) A13 - View
Gossypium hirsutum Gohir.A02G003650 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED A02 - View
Gossypium hirsutum Gohir.A10G150400 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED A10 + View
Gossypium hirsutum Gohir.D02G004050 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED D02 - View
Glycine max Glyma.09G275300 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED Gm09 - View
Glycine max Glyma.06G143100 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Gm06 - View
Glycine max Glyma.04G222300 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Gm04 + View
Glycine max Glyma.18G214200 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED Gm18 - View
Gossypium raimondii Gorai.005G004600 Chr05 - View
Gossypium raimondii Gorai.011G127700 Chr11 - View
Gossypium raimondii Gorai.013G271800 Chr13 - View
Lupinus albus Lalb_Chr19g0124011 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Lalb_Chr19 - View
Lotus japonicus Lj1g0024615 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) chr1 - View
Lotus japonicus Lj1g0026066 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED chr1 + View
Lonicera japonica Lj8C55G14 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_9_13841 PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lsat_1_v8_lg_9 - View
Lactuca sativa Lsat_1_v5_gn_5_152401 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI15_g08961_MAGBIO AED:0.01 Chr15 + View
Malus domestica MD07G1233300 RING/U-box superfamily protein Chr07 + View
Malus domestica MD04G1174300 RING/U-box superfamily protein Chr04 + View
Malus domestica MD12G1187900 RING/U-box superfamily protein Chr12 + View
Malus domestica MD01G1167200 RING/U-box superfamily protein Chr01 + View
Manihot esculenta Manes.08G171500 Chromosome08 - View
Manihot esculenta Manes.10G001200 Chromosome10 - View
Manihot esculenta Manes.09G117400 Chromosome09 + View
Manihot esculenta Manes.07G140800 Chromosome07 + View
Medicago truncatula Medtr3g094000 RING-H2 zinc finger protein chr3 - View
Medicago truncatula Medtr7g073200 RING-H2 finger protein ATL1L chr7 + View
Nelumbo nucifera Nn5g26854 chr5 - View
Petunia axillaris Peaxi162Scf00732g00337 Unknown protein Peaxi162Scf00732 - View
Punica granatum PGR044G0975 NC_045134.1 + View
Punica granatum PGR004G1383 NC_045131.1 + View
Punica granatum PGR142G0937 NC_045128.1 + View
Prunus persica Prupe.2G263800 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Pp02 + View
Prunus persica Prupe.6G293100 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Pp06 + View
Papaver somniferum PSO384G1196 NC_039368.1 - View
Populus trichocarpa Potri.013G157000 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED Chr13 + View
Populus trichocarpa Potri.016G136200 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Chr16 + View
Populus trichocarpa Potri.019G130100 PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED Chr19 + View
Phaseolus vulgaris Phvul.008G083200 K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) Chr08 - View
Quercus lobata QL08p064794 8 + View
Quercus lobata QL07p032181 7 - View
Rosa chinensis RcHm_v2.0_Chr1g0372171 RcHm_v2.0_Chr1 + View
Rosa chinensis RcHm_v2.0_Chr3g0460531 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim09G0185700 chr09 + View
Rhododendron simsii Rhsim13G0059800 chr13 - View
Rhododendron simsii Rhsim05G0230400 chr05 + View
Striga asiatica SGA_v2.0_scaffold60G20890 scaffold60 - View
Salix brachista Sabra19G0127000 GWHAAZH00000019 + View
Schrenkiella parvula Sp3g09230 PTHR14155:SF74 - RING-H2 FINGER PROTEIN ATL45-RELATED ch3-1 - View
Trochodendron aralioides TAR636G3195 group1 - View
Trochodendron aralioides TAR633G0720 group2 + View
Trochodendron aralioides TAR623G0869 group7 - View
Trochodendron aralioides TAR369G0072 group18 - View
Theobroma cacao Thecc.10G181500 Chromosome_10 - View
Theobroma cacao Thecc.09G363700 RING/U-box superfamily protein Chromosome_9 + View
Theobroma cacao Thecc.04G152400 RING/U-box superfamily protein Chromosome_4 - View
Tripterygium wilfordii TWI09G1458 NC_052245.1 - View
Tripterygium wilfordii TWI73G1284 NC_052232.1 + View
Tripterygium wilfordii TWI53G0668 NC_052244.1 + View
Tripterygium wilfordii TWI77G0379 NC_052236.1 + View
Vigna mungo VMungo1383G1175 CM024070.1 - View
Vanilla planifolia HPP92_017914 Ring finger protein, putative *-* CM028158.1 - View
Vitis vinifera GSVIVG01032684001 chr13 - View
Zea mays Zm00001eb406080 Zm00001e039314 Putative RING zinc finger domain superfamily protein 10 - View
Zea mays Zm00001eb149500 Zm00001e019438 RING-H2 finger protein ATL74 3 + View