Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Actinidia chinensis | Actinidia00218 | Lachesis_group12 | - | View | |
| Actinidia chinensis | Actinidia39055 | Lachesis_group2 | + | View | |
| Avicennia marina | MSTRG.27841 | ScioBoG_94932_HRSCAF_95134 | - | View | |
| Avicennia marina | MSTRG.16532 | ScioBoG_19743_HRSCAF_19834 | + | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.ZS42GJ | K14294 - partner of Y14 and mago (WIBG, PYM) | arahy.Tifrunner.gnm1.Arahy.10 | - | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.BG3XJE | PTHR22959:SF0 - PARTNER OF Y14 AND MAGO | arahy.Tifrunner.gnm1.Arahy.20 | - | View |
| Cicer arietinum L. | Ca_00089_v3 | Ca_LG1_v3 | + | View | |
| Corylus avellana | Haze_01626 | Similar to PYM: Partner of Y14 and mago (Arabidopsis thaliana OX%3D3702) | 1 | - | View |
| Coffea canephora | Cc02_g22290 | Putative Partner of Y14 and mago | chr2 | - | View |
| Carpinus fangiana | Cfa005544 | Cfa02 | + | View | |
| Carya illinoinensis | CiPaw.05G042800 | K14294 - partner of Y14 and mago (WIBG, PYM) | Chr05 | - | View |
| Carica papaya | Cpa.g.sc2.26 | supercontig_2 | + | View | |
| Davidia involucrata | Dinv19352 | GWHABJS00000002 | + | View | |
| Durio zibethinus | Duzib248G0546 | NW_019168048.1 | - | View | |
| Durio zibethinus | Duzib132G0636 | NW_019167915.1 | + | View | |
| Eucalyptus grandis | Eucgr.I02711 | Chr09 | - | View | |
| Fragaria x ananassa | FAN13G3307 | K14294 - partner of Y14 and mago (WIBG, PYM) | Fvb5-2 | - | View |
| Gossypium hirsutum | Gohir.A03G210900 | K14294 - partner of Y14 and mago (WIBG, PYM) | A03 | - | View |
| Gossypium hirsutum | Gohir.D01G167800 | K14294 - partner of Y14 and mago (WIBG, PYM) | D01 | - | View |
| Gossypium hirsutum | Gohir.D02G232500 | KOG4325 - Uncharacterized conserved protein | D02 | - | View |
| Gossypium hirsutum | Gohir.A01G177000 | K14294 - partner of Y14 and mago (WIBG, PYM) | A01 | - | View |
| Gossypium raimondii | Gorai.005G260300 | Chr05 | - | View | |
| Gossypium raimondii | Gorai.002G208500 | Chr02 | - | View | |
| Lotus japonicus | Lj6g0003329 | K14294 - partner of Y14 and mago (WIBG, PYM) | chr6 | - | View |
| Lonicera japonica | Lj5A248T74 | GWHAAZE00000005 | - | View | |
| Lonicera japonica | Lj9C308T7 | GWHAAZE00000009 | + | View | |
| Lactuca sativa | Lsat_1_v5_gn_7_77960 | PTHR22959 - PYM PROTEIN | Lsat_1_v8_lg_7 | + | View |
| Lactuca sativa | Lsat_1_v5_gn_9_116381 | K14294 - partner of Y14 and mago (WIBG, PYM) | Lsat_1_v8_lg_9 | - | View |
| Malus domestica | MD15G1418700 | partner of Y14-MAGO | Chr15 | + | View |
| Manihot esculenta | Manes.10G132000 | Chromosome10 | + | View | |
| Medicago truncatula | Medtr2g007770 | partner of Y14-mago protein, putative | chr2 | + | View |
| Prunus persica | Prupe.1G562800 | Pp01 | + | View | |
| Pisum sativum | Psat1g220000 | Mago binding | chr1LG6 | + | View |
| Populus trichocarpa | Potri.001G209100 | PTHR22959:SF0 - PARTNER OF Y14 AND MAGO | Chr01 | + | View |
| Salvia bowleyana | SalBow6G1776 | GWHASIU00000002 | - | View | |
| Salix brachista | Sabra01G0161300 | GWHAAZH00000001 | + | View | |
| Solanum pennellii | Sopen01g046960 | The PYM gene encodes a protein capable of interacting with MAGO, and Y14, whose orthologs form part of the exon junction complex in animal cells. In vitro binding assays indicate that PYM can bind to MAGO and Y14 either individually, or when they are together. But, MAGO-Y14-PYM ternary complexes are difficult to detect in vivo in Arabidopsis based on pull-down experiments. However there is some evidence for a weak association in Arabidopsis flowers. PYM appears primarily cytoplasmic, but it also seems to into the nucleus at times. Its nuclear localization signal has not been rigorously defined, but there is evidence for a nuclear export signal between amino acids 171-205 in the C-terminus. | partner of Y14-MAGO (PYM) | FUNCTIONS IN: protein binding | INVOLVED IN: biological_process unknown | LOCATED IN: nucleoplasm, nucleolus, cytoplasm | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Exon junction complex, Pym | Spenn-ch01 | + | View |
| Solanum tuberosum | PGSC0003DMG400023776 | Partner of Y14-mago | ST4.03ch01 | + | View |
| Trochodendron aralioides | TAR376G0767 | group14 | + | View | |
| Theobroma cacao | Thecc.02G041200 | Partner of Y14-MAGO | Chromosome_2 | + | View |
| Vaccinium macrocarpon | vmacro01776 | Similar to PYM: Partner of Y14 and mago (Arabidopsis thaliana OX%3D3702) | chr1_Vaccinium_macrocarpon_Stevens_v1 | - | View |