Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Nn3g17137 chr3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr11.1844 chr11 - View
Actinidia chinensis Actinidia04020 Lachesis_group4 - View
Actinidia chinensis Actinidia31182 Lachesis_group12 - View
Avicennia marina MSTRG.7822 ScioBoG_102841_HRSCAF_103114 - View
Avicennia marina MSTRG.674 ScioBoG_102831_HRSCAF_103044 + View
Amaranthus hybridus Ah.02g131280 Alpha-amylase 3, chloroplastic (AtAMY3) (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) AmaHy_arrow1_Scaffold_2 + View
Aquilegia oxysepala Aqoxy3G03277 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FS95PS 3.2.1.1//3.2.1.141 - Alpha-amylase / Glycogenase // 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X74CZZ 3.2.1.1//3.2.1.141 - Alpha-amylase / Glycogenase // 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T04E6T 3.2.1.1//3.2.1.141 - Alpha-amylase / Glycogenase // 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT1G69830 alpha-amylase-like 3 Encodes a plastid-localized %26#945%3B-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms. alpha-amylase-like 3 (AMY3)%3B FUNCTIONS IN: alpha-amylase activity%3B INVOLVED IN: circadian rhythm%2C starch catabolic process%3B LOCATED IN: chloroplast stroma%2C chloroplast%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%2C Glycoside hydrolase%2C subgroup%2C catalytic core (InterPro:IPR013781)%2C Glycosyl hydrolase%2C family 13%2C catalytic domain (InterPro:IPR006047)%2C Alpha-amylase%2C C-terminal beta-sheet (InterPro:IPR012850)%3B BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 (TAIR:AT1G76130.1)%3B Has 11240 Blast hits to 11194 proteins in 2094 species: Archae - 95%3B Bacteria - 8555%3B Metazoa - 677%3B Fungi - 729%3B Plants - 646%3B Viruses - 0%3B Other Eukaryotes - 538 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR1120G063 AmTr_v1.0_scaffold00078 + View
Brassica carinata BcaB03g14761 ChrB03 - View
Beta vulgaris EL10Ac6g13156 3.2.1.1//3.2.1.141 - Alpha-amylase / Glycogenase // 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Chr6_EL10_PGA_scaffold0 + View
Camellia sinensis var. sinensis CSS0035472 alpha-amylase [Actinidia chinensis] Chr12 + View
Capsicum annuum CAN.G279.13 PGAv.1.6.scaffold279 + View
Cannabis sativa CANSAT64G0240 NC_044379.1 + View
Cicer arietinum L. Ca_04744_v3 Ca_LG2_v3 + View
Corylus avellana Haze_12057 Similar to AMY3: Alpha-amylase 3, chloroplastic (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc11_g13430 Putative Alpha-amylase isozyme 3E chr11 - View
Citrus clementina Ciclev10030661m.g scaffold_4 + View
Carpinus fangiana Cfa009027 Cfa03 - View
Cardamine hirsuta CARHR062910 Alpha-amylase-like 3 Chr2 - View
Carya illinoinensis CiPaw.05G139400 PTHR10357:SF171 - ALPHA-AMYLASE 3, CHLOROPLASTIC Chr05 - View
Carya illinoinensis CiPaw.06G081000 PTHR10357:SF171 - ALPHA-AMYLASE 3, CHLOROPLASTIC Chr06 + View
Citrullus lanatus ClCG05G024550 Alpha-amylase, putative CG_Chr05 - View
Cucumis melo MELO3C012071.2 Alpha-amylase, putative chr10 - View
Carica papaya Cpa.g.sc5.271 supercontig_5 - View
Chenopodium quinoa AUR62005729 AMY3: Alpha-amylase 3, chloroplastic C_Quinoa_Scaffold_1214 + View
Chenopodium quinoa AUR62028831 AMY3: Alpha-amylase 3, chloroplastic C_Quinoa_Scaffold_2837 - View
Capsella rubella Carub.0002s1652 PTHR10357:SF171 - ALPHA-AMYLASE 3, CHLOROPLASTIC scaffold_2 - View
Cucumis sativus L. CsaV3_5G032400 Alpha-amylase chr5 + View
Daucus carota DCAR_027388 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv24958 GWHABJS00000018 + View
Durio zibethinus Duzib248G1546 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NW_019168048.1 + View
Durio zibethinus Duzib268G0604 NW_019168270.1 - View
Durio zibethinus Duzib251G0295 NW_019167971.1 - View
Erigeron canadensis ECA246G2169 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.G02543 Chr07 + View
Erythranthe guttata Migut.E00112 scaffold_5 - View
Eutrema salsugineum Thhalv10018099m.g 3.2.1.141 - 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase scaffold_9 + View
Fragaria x ananassa FAN17G2095 Fvb4-2 + View
Fragaria x ananassa FAN12G0310 3.2.1.1//3.2.1.141 - Alpha-amylase / Glycogenase // 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Fvb4-3 + View
Fragaria x ananassa FAN07G2190 3.2.1.141 - 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Fvb4-4 - View
Fragaria x ananassa FAN22G1876 3.2.1.1//3.2.1.141 - Alpha-amylase / Glycogenase // 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Fvb4-1 - View
Fragaria vesca FvH4_4g31910 3.2.1.1//3.2.1.141 - Alpha-amylase / Glycogenase // 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Fvb4 - View
Gossypium hirsutum Gohir.D12G170000 PTHR10357:SF171 - ALPHA-AMYLASE 3, CHLOROPLASTIC D12 - View
Gossypium hirsutum Gohir.A12G166500 PTHR10357:SF171 - ALPHA-AMYLASE 3, CHLOROPLASTIC A12 - View
Glycine max Glyma.08G296800 3.2.1.1//3.2.1.141 - Alpha-amylase / Glycogenase // 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Gm08 + View
Glycine max Glyma.02G020500 3.2.1.1//3.2.1.141 - Alpha-amylase / Glycogenase // 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Gm02 + View
Glycine max Glyma.18G125300 PTHR10357:SF171 - ALPHA-AMYLASE 3, CHLOROPLASTIC Gm18 - View
Gossypium raimondii Gorai.008G182600 Chr08 - View
Helianthus annuus HanXRQChr14g0449961 Putative trehalose synthase/alpha-amylase, N-terminal; Glycoside hydrolase, family 13; Glycoside hydrolase superfamily HanXRQChr14 + View
Lupinus albus Lalb_Chr05g0230231 3.2.1.1 - Alpha-amylase / Glycogenase Lalb_Chr05 + View
Lupinus albus Lalb_Chr10g0097991 3.2.1.1//3.2.1.141 - Alpha-amylase / Glycogenase // 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Lalb_Chr10 + View
Lotus japonicus Lj2g0003595 3.2.1.141 - 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase chr2 + View
Lonicera japonica Lj6A793T95 GWHAAZE00000006 + View
Lonicera japonica Lj3A1042T89 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_3_51421 3.2.1.141 - 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Lsat_1_v8_lg_3 + View
Malus domestica MD13G1078600 alpha-amylase-like 3 Chr13 - View
Malus domestica MD16G1078200 alpha-amylase-like 3 Chr16 - View
Manihot esculenta Manes.01G189800 Chromosome01 - View
Manihot esculenta Manes.05G097100 Chromosome05 + View
Medicago truncatula Medtr8g468990 alpha amylase domain protein chr8 - View
Nicotiana tabacum Nitab4.5_0000879g0090 Alpha-amylase, C-terminal beta-sheet, Glycoside hydrolase, family 13, Glycosyl hydrolase, family 13, subfamily, catalytic domain, Glycoside hydrolase, superfamily, Glycosyl hydrolase, family 13, all-beta, Glycoside hydrolase, catalytic domain, Glycosyl hydrolase, family 13, catalytic domain Nitab4.5_0000879 - View
Petunia axillaris Peaxi162Scf00209g00331 alpha-amylase-like 3 Peaxi162Scf00209 - View
Punica granatum PGR119G1594 NC_045132.1 - View
Prunus persica Prupe.1G268300 Pp01 + View
Papaver somniferum PSO832G2404 NC_039367.1 - View
Papaver somniferum PSO591G0257 NW_020621603.1 + View
Papaver somniferum PSO478G1338 NC_039361.1 - View
Papaver somniferum PSO017G0411 NC_039362.1 + View
Phaseolus vulgaris Phvul.002G065700 3.2.1.141 - 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Chr02 + View
Phaseolus vulgaris Phvul.003G069200 3.2.1.141 - 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Chr03 - View
Quercus lobata QL03p065556 3 - View
Rosa chinensis RcHm_v2.0_Chr4g0440561 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim12G0130100 chr12 + View
Striga asiatica SGA_v2.0_scaffold302G47859 scaffold302 - View
Salvia bowleyana SalBow2G3062 GWHASIU00000007 + View
Simmondsia chinensis Sc04g0008440 GWHAASQ00000004 - View
Sechium edule Sed0014431 LG04 + View
Solanum lycopersicum Solyc05g007070.2 Alpha-amylase (AHRD V3.3 *** A0A2G2YEB6_CAPAN) SL4.0ch05 + View
Schrenkiella parvula Sp5g24940 3.2.1.141 - 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase ch5-6 - View
Solanum pennellii Sopen05g003040 Encodes a plastid-localized, #945, -amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms. | alpha-amylase-like 3 (AMY3) | FUNCTIONS IN: alpha-amylase activity | INVOLVED IN: circadian rhythm, starch catabolic process | LOCATED IN: chloroplast stroma, chloroplast | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core , Glycoside hydrolase, subgroup, catalytic core , Glycosyl hydrolase, family 13, catalytic domain , Alpha-amylase, C-terminal beta-sheet | BEST Arabidopsis thaliana protein match is: alpha-amylase-like 2 Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG401017626 Alpha-amylase ST4.03ch05 - View
Selenicereus undatus Hund05909 Scaffold_19641 - View
Selenicereus undatus Hund25267 Scaffold_3410 - View
Trochodendron aralioides TAR371G0512 group13 + View
Trochodendron aralioides TAR629G2838 group0 - View
Theobroma cacao Thecc.02G354600 Alpha-amylase-like 3 Chromosome_2 - View
Tarenaya hassleriana THA.LOC104822100 alpha-amylase 3%2C chloroplastic NW_010966617.1 + View
Trifolium pratense TPR.G33281 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI75G1868 NC_052253.1 + View
Vaccinium macrocarpon vmacro16327 Similar to AMY3: Alpha-amylase 3, chloroplastic (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G1269 CM024074.1 - View
Vigna mungo VMungo0251G1110 CM024069.1 - View
Vitis vinifera GSVIVG01020069001 chr1 + View