Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Nitab4.5_0005796g0040 Zinc finger, RING-type, Zinc finger, RING/FYVE/PHD-type Nitab4.5_0005796 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.3080 chr5 + View
Actinidia chinensis Actinidia00547 Lachesis_group12 - View
Actinidia chinensis Actinidia02230 Lachesis_group7 + View
Arabidopsis lyrata AL4G10680 scaffold_4 - View
Amaranthus hybridus Ah.01g019140 AmaHy_arrow1_Scaffold_1 - View
Aquilegia oxysepala Aqoxy6G01192 CHR06 + View
Aquilegia oxysepala Aqoxy5G01555 CHR05 - View
Arabidopsis thaliana AT2G21500 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G39140.5)%3B Has 279 Blast hits to 254 proteins in 46 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 46%3B Fungi - 31%3B Plants - 177%3B Viruses - 0%3B Other Eukaryotes - 23 (source: NCBI BLink). Chr2 - View
Camellia sinensis var. sinensis CSS0000665 PREDICTED: uncharacterized protein LOC100250419 isoform X2 [Vitis vinifera] Chr3 - View
Camellia sinensis var. sinensis CSS0034824 PREDICTED: uncharacterized protein LOC103335694 [Prunus mume] Contig1006 - View
Cannabis sativa CANSAT11G1577 NC_044377.1 - View
Cicer arietinum L. Ca_23905_v3 Ca_LG7_v3 - View
Corylus avellana Haze_02327 Protein of unknown function 1 + View
Coffea canephora Cc02_g17280 Putative RING/U-box superfamily protein chr2 - View
Citrus clementina Ciclev10001121m.g scaffold_5 + View
Citrus clementina Ciclev10028499m.g scaffold_8 + View
Carpinus fangiana Cfa013874 Cfa05 + View
Carya illinoinensis CiPaw.07G157000 Chr07 - View
Citrullus lanatus ClCG11G004160 RING/U-box superfamily protein LENGTH=429 CG_Chr11 - View
Cucumis melo MELO3C023321.2 RING/U-box protein chr11 + View
Chenopodium quinoa AUR62016771 Protein of unknown function C_Quinoa_Scaffold_3670 + View
Chenopodium quinoa AUR62011288 Protein of unknown function C_Quinoa_Scaffold_3333 - View
Capsella rubella Carub.0004s0054 scaffold_4 - View
Cucumis sativus L. CsaV3_2G015010 RING/U-box superfamily protein chr2 + View
Davidia involucrata Dinv42039 GWHABJS00000002 + View
Davidia involucrata Dinv23489 GWHABJS00000005 - View
Durio zibethinus Duzib052G0846 NW_019167849.1 + View
Durio zibethinus Duzib132G1074 NW_019167915.1 - View
Durio zibethinus Duzib248G0497 NW_019168048.1 + View
Durio zibethinus Duzib093G0436 NW_019167937.1 + View
Erigeron canadensis ECA236G2631 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.G01695 Chr07 + View
Erythranthe guttata Migut.B00210 scaffold_2 - View
Fragaria x ananassa FAN20G0016 PF00097 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) Fvb2-3 - View
Fragaria x ananassa FAN24G3524 PF00097 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) Fvb2-2 - View
Fragaria vesca FvH4_2g09590 PF00097 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) Fvb2 + View
Gossypium hirsutum Gohir.A13G032500 A13 - View
Gossypium hirsutum Gohir.D13G030700 D13 - View
Glycine max Glyma.06G009900 Gm06 - View
Glycine max Glyma.12G235700 Gm12 + View
Glycine max Glyma.14G071300 Gm14 - View
Glycine max Glyma.13G201200 Gm13 + View
Gossypium raimondii Gorai.013G034900 Chr13 - View
Lotus japonicus Lj1g0004522 chr1 + View
Lonicera japonica Lj9C377G11 GWHAAZE00000009 + View
Lonicera japonica Lj5A193T105 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_5_120501 Lsat_1_v8_lg_5 + View
Magnolia biondii MBI10_g00754_MAGBIO AED:0.32 Chr10 + View
Malus domestica MD10G1069100 RING/U-box superfamily protein Chr10 - View
Malus domestica MD05G1061300 RING/U-box superfamily protein Chr05 - View
Manihot esculenta Manes.04G087266 Chromosome04 - View
Manihot esculenta Manes.11G091600 Chromosome11 + View
Medicago truncatula Medtr8g037750 ubiquitin-protein ligase chr8 - View
Nelumbo nucifera Nn1g05809 chr1 - View
Olea europaea Oeu046146.5 chr16 - View
Olea europaea Oeu020732.1 chr5 - View
Petunia axillaris Peaxi162Scf00016g00428 RING/U-box superfamily protein Peaxi162Scf00016 - View
Punica granatum PGR042G3147 NC_045130.1 - View
Prunus persica Prupe.8G091100 Pp08 - View
Populus trichocarpa Potri.009G120000 PF00097 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) Chr09 + View
Populus trichocarpa Potri.004G158400 Chr04 + View
Phaseolus vulgaris Phvul.009G005500 Chr09 - View
Phaseolus vulgaris Phvul.001G011700 Chr01 - View
Phaseolus vulgaris Phvul.011G210200 Chr11 - View
Quercus lobata QL11p044804 11 - View
Rosa chinensis RcHm_v2.0_Chr6g0265921 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim05G0071200 chr05 - View
Rhododendron simsii Rhsim11G0180300 chr11 + View
Striga asiatica SGA_v2.0_scaffold58G20503 scaffold58 - View
Salvia bowleyana SalBow6G6824 GWHASIU00000002 - View
Salix brachista Sabra04G0105700 GWHAAZH00000004 + View
Salix brachista Sabra09G0092300 GWHAAZH00000009 + View
Sechium edule Sed0002025 LG01 - View
Sechium edule Sed0017187 LG05 + View
Solanum lycopersicum Solyc01g109910.4 RING/U-box superfamily protein (AHRD V3.3 *** Q8L7K7_ARATH) SL4.0ch01 + View
Schrenkiella parvula Sp4g00660 ch4-1 - View
Solanum pennellii Sopen01g052100 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400038651 Ubiquitin-protein ligase ST4.03ch01 + View
Selenicereus undatus Hund06252 Scaffold_33676 - View
Trochodendron aralioides TAR381G1125 group11 - View
Theobroma cacao Thecc.02G080600 RING/U-box superfamily protein Chromosome_2 - View
Trifolium pratense TPR.G1857 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI31G0979 NC_052233.1 + View
Tripterygium wilfordii TWI79G0980 NC_052238.1 + View
Vaccinium macrocarpon vmacro17462 Protein of unknown function chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro02079 Protein of unknown function chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01023822001 chr3 - View