Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Migut.F01598 scaffold_6 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G7650 LG-10 - View
Acer truncatum Atru.chr12.990 chr12 - View
Actinidia chinensis Actinidia18623 Lachesis_group17 + View
Actinidia chinensis Actinidia06170 Lachesis_group20 + View
Actinidia chinensis Actinidia34714 Lachesis_group6 + View
Avicennia marina MSTRG.27567 ScioBoG_8578_HRSCAF_8617 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EAS95G PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MM7BLT arahy.Tifrunner.gnm1.Arahy.19 - View
Arabidopsis thaliana AT2G36730 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21065.1)%3B Has 32545 Blast hits to 13146 proteins in 206 species: Archae - 0%3B Bacteria - 9%3B Metazoa - 61%3B Fungi - 42%3B Plants - 32037%3B Viruses - 0%3B Other Eukaryotes - 396 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR0820G219 AmTr_v1.0_scaffold00040 - View
Brassica carinata BcaC06g32183 ChrC06 + View
Brassica napus A10p31420 A10 - View
Brassica napus C09p72090 C09 - View
Brassica oleracea BolC9t59954H C9 - View
Brassica rapa BraA10t45188Z A10 - View
Beta vulgaris EL10Ac4g08694 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr4_EL10_PGA_scaffold1 - View
Cannabis sativa CANSAT56G1218 NC_044371.1 - View
Cannabis sativa CANSAT56G3521 NC_044371.1 + View
Corylus avellana Haze_03480 Similar to PCMP-H35: Putative pentatricopeptide repeat-containing protein At5g09950 (Arabidopsis thaliana OX%3D3702) 1 - View
Cardamine hirsuta CARHR208480 40S ribosomal protein S17 Chr6 - View
Carya illinoinensis CiPaw.10G011000 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr10 + View
Carya illinoinensis CiPaw.13G038100 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Chr13 - View
Citrullus lanatus ClCG10G018590 40S ribosomal protein S17, putative CG_Chr10 - View
Citrullus lanatus ClCG04G010100 Pentatricopeptide repeat-containing protein CG_Chr04 + View
Cucumis melo MELO3C009509.2 40S ribosomal protein S17-like chr04 - View
Cucumis melo MELO3C024569.2 Pentatricopeptide repeat-containing family protein chr08 - View
Cucumis sativus L. CsaV3_6G040730 Pentatricopeptide repeat-containing protein chr6 + View
Davidia involucrata Dinv21144 GWHABJS00000021 - View
Davidia involucrata Dinv21193 GWHABJS00000021 - View
Durio zibethinus Duzib106G0832 NW_019168492.1 - View
Durio zibethinus Duzib128G1369 NW_019168481.1 - View
Erigeron canadensis ECA233G2659 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.G02685 Chr07 - View
Eucalyptus grandis Eucgr.A02621 Chr01 - View
Eutrema salsugineum Thhalv10017676m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_10 - View
Eutrema salsugineum Thhalv10010201m.g PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_16 + View
Gossypium hirsutum Gohir.D10G204950 PF00076//PF01535//PF13041//PF14432 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D10 - View
Gossypium hirsutum Gohir.A10G197850 PF00076//PF01535//PF13041//PF14432 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A10 - View
Gossypium hirsutum Gohir.D01G193600 PF01535//PF12854//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) D01 - View
Gossypium hirsutum Gohir.A01G204100 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) A01 - View
Gossypium hirsutum Gohir.A09G139700 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A09 + View
Gossypium hirsutum Gohir.D09G134900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D09 - View
Gossypium raimondii Gorai.002G237700 Chr02 - View
Gossypium raimondii Gorai.011G229900 Chr11 - View
Gossypium raimondii Gorai.006G154800 Chr06 - View
Lupinus albus Lalb_Chr02g0154831 PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr02 - View
Lonicera japonica Lj3P925T51 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_8_24360 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lsat_1_v8_lg_8 + View
Malus domestica MD14G1026500 Tetratricopeptide repeat (TPR)-like superfamily protein Chr14 + View
Malus domestica MD14G1033700 Ribosomal S17 family protein Chr14 + View
Manihot esculenta Manes.08G026500 Chromosome08 + View
Medicago truncatula Medtr1g059720 organelle transcript processing protein, putative chr1 - View
Oryza sativa ssp. japonica Os12g0156900 Pentatricopeptide repeat domain containing protein. chr12 + View
Punica granatum PGR142G0603 NC_045128.1 - View
Punica granatum PGR004G0724 NC_045131.1 - View
Striga asiatica SGA_v2.0_scaffold13G06433 scaffold13 - View
Salvia bowleyana SalBow6G2047 GWHASIU00000002 - View
Salvia bowleyana SalBow6G7264 GWHASIU00000002 - View
Salix brachista Sabra06G0159700 GWHAAZH00000006 - View
Sechium edule Sed0003272 LG14 - View
Sechium edule Sed0014608 LG12 - View
Sechium edule Sed0007831 LG04 + View
Solanum lycopersicum Solyc05g055230.2 40S ribosomal protein S17 (AHRD V3.3 *** A0A2G2WU93_CAPBA) SL4.0ch05 - View
Solanum lycopersicum Solyc10g150146.1 40S ribosomal protein S17 (AHRD V3.3 *** Q6RJY3_CAPAN) SL4.0ch10 - View
Schrenkiella parvula Sp6g38030 K02962 - small subunit ribosomal protein S17e (RP-S17e, RPS17) ch6-6 - View
Solanum pennellii Sopen05g033670 Ribosomal S17 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: ribosome, intracellular | EXPRESSED IN: male gametophyte, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e , Ribosomal protein S17e, conserved site | BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein Spenn-ch05 - View
Solanum pennellii Sopen11g002620 Ribosomal S17 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: ribosome, intracellular | EXPRESSED IN: male gametophyte, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e , Ribosomal protein S17e, conserved site | BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein Spenn-ch11 - View
Solanum pennellii Sopen10g032640 Ribosomal S17 family protein | FUNCTIONS IN: structural constituent of ribosome | INVOLVED IN: translation | LOCATED IN: ribosome, intracellular | EXPRESSED IN: male gametophyte, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Ribosomal protein S17e , Ribosomal protein S17e, conserved site | BEST Arabidopsis thaliana protein match is: Ribosomal S17 family protein Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400007598 Pentatricopeptide repeat-containing protein ST4.03ch11 + View
Solanum tuberosum PGSC0003DMG400023394 40S ribosomal protein S17 ST4.03ch05 - View
Solanum tuberosum PGSC0003DMG400028243 40S ribosomal protein S17 ST4.03ch10 + View
Trochodendron aralioides TAR636G2966 group1 + View
Trochodendron aralioides TAR633G0689 group2 - View
Theobroma cacao Thecc.10G107200 Pentatricopeptide repeat (PPR) superfamily protein Chromosome_10 + View
Trifolium pratense TPR.G1972 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI53G0411 NC_052244.1 - View
Tripterygium wilfordii TWI74G0923 NC_052234.1 + View
Tripterygium wilfordii TWI77G0472 NC_052236.1 - View
Utricularia gibba unitig_46.g18640 unitig_46 + View
Vigna mungo VMungo0720G0866 CM024071.1 - View
Vitis vinifera GSVIVG01034655001 chr13 + View
Vitis vinifera GSVIVG01033920001 chr8 - View