Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG11G8710 | LG-11 | - | View | |
| Aethionema arabicum | Aa31LG5G14970 | LG-5 | + | View | |
| Acer truncatum | Atru.chr2.897 | chr2 | - | View | |
| Actinidia chinensis | Actinidia06785 | Lachesis_group22 | - | View | |
| Arabidopsis lyrata | AL3G14570 | scaffold_3 | + | View | |
| Arabidopsis lyrata | AL6G40560 | scaffold_6 | + | View | |
| Amaranthus hybridus | Ah.06g191950 | Rubisco accumulation factor 1.2, chloroplastic | AmaHy_arrow1_Scaffold_6 | - | View |
| Arabidopsis thaliana | AT5G28500 | rubisco accumulation factor-like protein unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast stroma%2C chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04550.1)%3B Has 109 Blast hits to 109 proteins in 49 species: Archae - 0%3B Bacteria - 67%3B Metazoa - 0%3B Fungi - 0%3B Plants - 41%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). | Chr5 | + | View |
| Arabidopsis thaliana | AT3G04550 | rubisco accumulation factor-like protein unknown protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast stroma%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28500.1)%3B Has 110 Blast hits to 110 proteins in 51 species: Archae - 0%3B Bacteria - 67%3B Metazoa - 1%3B Fungi - 0%3B Plants - 41%3B Viruses - 0%3B Other Eukaryotes - 1 (source: NCBI BLink). | Chr3 | + | View |
| Brassica carinata | BcaB04g21366 | ChrB04 | - | View | |
| Brassica carinata | BcaC09g47795 | ChrC09 | - | View | |
| Brassica carinata | BcaNung01728 | Contig593 | - | View | |
| Brassica napus | A06p37950 | A06 | + | View | |
| Brassica napus | BNapus_Darmor_BZH_scaffold_78p00860 | BNapus_Darmor_BZH_scaffold_78 | + | View | |
| Brassica napus | A01p40850 | A01 | - | View | |
| Brassica oleracea | BolC1t05743H | C1 | - | View | |
| Brassica rapa | BraA06t26711Z | A06 | + | View | |
| Brassica rapa | BraA01t04521Z | A01 | - | View | |
| Beta vulgaris | EL10Ac4g09057 | PTHR35299//PTHR35299:SF2 - FAMILY NOT NAMED // RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Chr4_EL10_PGA_scaffold1 | + | View |
| Camellia sinensis var. sinensis | CSS0036761 | hypothetical protein POPTR_0013s04210g [Populus trichocarpa] | Chr7 | - | View |
| Cannabis sativa | CANSAT54G2996 | NC_044375.1 | + | View | |
| Cicer arietinum L. | Ca_10007_v3 | Ca_LG4_v3 | - | View | |
| Corylus avellana | Haze_04459 | Similar to RAF1.2: Rubisco accumulation factor 1.2, chloroplastic (Arabidopsis thaliana OX%3D3702) | 2 | + | View |
| Carpinus fangiana | Cfa006329 | Cfa02 | - | View | |
| Cardamine hirsuta | CARHR078740 | unknown protein | Chr3 | + | View |
| Cardamine hirsuta | CARHR185150 | unknown protein | Chr6 | + | View |
| Carya illinoinensis | CiPaw.07G078300 | PTHR35299//PTHR35299:SF2 - FAMILY NOT NAMED // RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Chr07 | - | View |
| Carica papaya | Cpa.g.sc162.24 | supercontig_162 | - | View | |
| Capsella rubella | Carub.0003s0370 | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | scaffold_3 | + | View |
| Capsella rubella | Carub.0006s2578 | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | scaffold_6 | + | View |
| Davidia involucrata | Dinv06988 | GWHABJS00000009 | - | View | |
| Durio zibethinus | Duzib128G1627 | NW_019168481.1 | - | View | |
| Eucalyptus grandis | Eucgr.H04253 | Chr08 | - | View | |
| Erythranthe guttata | Migut.F00810 | scaffold_6 | + | View | |
| Eutrema salsugineum | Thhalv10020727m.g | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | scaffold_13 | - | View |
| Eutrema salsugineum | Thhalv10004236m.g | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | scaffold_6 | + | View |
| Fragaria x ananassa | FAN02G1274 | PTHR35299//PTHR35299:SF2 - FAMILY NOT NAMED // RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Fvb6-4 | + | View |
| Fragaria x ananassa | FAN05G4153 | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Fvb6-3 | + | View |
| Fragaria x ananassa | FAN09G4845 | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Fvb6-2 | - | View |
| Fragaria x ananassa | FAN05G2712 | PTHR35299//PTHR35299:SF2 - FAMILY NOT NAMED // RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Fvb6-3 | - | View |
| Fragaria x ananassa | FAN14G1966 | PTHR35299//PTHR35299:SF2 - FAMILY NOT NAMED // RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Fvb6-1 | - | View |
| Fragaria x ananassa | FAN14G5007 | PTHR35299//PTHR35299:SF2 - FAMILY NOT NAMED // RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Fvb6-1 | - | View |
| Fragaria vesca | FvH4_6g02280 | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Fvb6 | + | View |
| Gossypium hirsutum | Gohir.A13G103800 | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | A13 | + | View |
| Glycine max | Glyma.10G166900 | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Gm10 | + | View |
| Glycine max | Glyma.20G222200 | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Gm20 | - | View |
| Lupinus albus | Lalb_Chr06g0168341 | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Lalb_Chr06 | + | View |
| Lotus japonicus | Lj5g0004576 | PTHR35299//PTHR35299:SF2 - FAMILY NOT NAMED // RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | chr5 | + | View |
| Lonicera japonica | Lj2C39T18 | GWHAAZE00000002 | - | View | |
| Lactuca sativa | Lsat_1_v5_gn_2_107721 | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Lsat_1_v8_lg_2 | - | View |
| Malus domestica | MD04G1228600 | Protein of unknown function | Chr04 | - | View |
| Malus domestica | MD12G1245900 | Protein of unknown function | Chr12 | - | View |
| Medicago truncatula | Medtr1g079870 | hypothetical protein | chr1 | - | View |
| Nelumbo nucifera | Nn1g02711 | chr1 | - | View | |
| Nicotiana tabacum | Nitab4.5_0000856g0150 | Unknown | Nitab4.5_0000856 | + | View |
| Petunia axillaris | Peaxi162Scf00120g00021 | Rubisco accumulation factor 2, chloroplastic | Peaxi162Scf00120 | + | View |
| Punica granatum | PGR004G0430 | NC_045131.1 | - | View | |
| Prunus persica | Prupe.6G348600 | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Pp06 | - | View |
| Pisum sativum | Psat6g143080 | Intracellular membrane-bounded organelle | chr6LG2 | - | View |
| Papaver somniferum | PSO210G1007 | NC_039359.1 | + | View | |
| Papaver somniferum | PSO832G3978 | NC_039367.1 | + | View | |
| Populus trichocarpa | Potri.013G044900 | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | Chr13 | - | View |
| Quercus lobata | QL03p031869 | 3 | + | View | |
| Rosa chinensis | RcHm_v2.0_Chr3g0450031 | RcHm_v2.0_Chr3 | + | View | |
| Rhododendron simsii | Rhsim05G0175300 | chr05 | - | View | |
| Salvia bowleyana | SalBow3G3408 | GWHASIU00000006 | + | View | |
| Salix brachista | Sabra13G0041300 | GWHAAZH00000013 | - | View | |
| Solanum lycopersicum | Solyc11g006060.2 | Rubisco accumulation factor 1, chloroplastic (AHRD V3.3 *** A0A2G2VFE2_CAPBA) | SL4.0ch11 | + | View |
| Schrenkiella parvula | Sp3g03390 | PTHR35299:SF2 - RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | ch3-1 | + | View |
| Schrenkiella parvula | Sp2g20170 | PTHR35299//PTHR35299:SF2 - FAMILY NOT NAMED // RUBISCO ACCUMULATION FACTOR 1, CHLOROPLASTIC-RELATED | ch2-4 | - | View |
| Solanum pennellii | Sopen11g002000 | unknown protein | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast stroma, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | BEST Arabidopsis thaliana protein match is: unknown protein | Spenn-ch11 | + | View |
| Solanum tuberosum | PGSC0003DMG400028668 | Conserved gene of unknown function | ST4.03ch11 | - | View |
| Trochodendron aralioides | TAR633G0272 | group2 | + | View | |
| Theobroma cacao | Thecc.05G275300 | Chromosome_5 | + | View | |
| Tarenaya hassleriana | THA.LOC104799246 | rubisco accumulation factor 1.1%2C chloroplastic | NW_010968505.1 | + | View |
| Vaccinium macrocarpon | vmacro20002 | Similar to RAF1.2: Rubisco accumulation factor 1.2, chloroplastic (Arabidopsis thaliana OX%3D3702) | chr5_Vaccinium_macrocarpon_Stevens_v1 | + | View |
| Vigna mungo | VMungo0720G3050 | CM024071.1 | + | View |