Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Manes.14G079700 Chromosome14 + View
Manes.05G103601 Chromosome05 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G3540 LG-7 + View
Acer truncatum Atru.chr11.1764 chr11 - View
Actinidia chinensis Actinidia04882 Lachesis_group1 + View
Actinidia chinensis Actinidia37619 Lachesis_group13 - View
Arabidopsis lyrata AL1G31230 scaffold_1 + View
Arabidopsis lyrata AL2G28680 scaffold_2 - View
Amaranthus hybridus Ah.02g113630 Agamous-like MADS-box protein AGL65 AmaHy_arrow1_Scaffold_2 + View
Aquilegia oxysepala Aqoxy3G03432 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.U9RCFT PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PIZ1S4 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K1S2P8 PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GD5YP7 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT1G69540 AGAMOUS-like 94 Encodes a member of the MIKC (MADS box%2C Keratin binding domain%2C and C terminal domain containing )family of transcriptional regulators. AGAMOUS-like 94 (AGL94)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 30 (TAIR:AT2G03060.2)%3B Has 5894 Blast hits to 5894 proteins in 737 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 613%3B Fungi - 292%3B Plants - 4926%3B Viruses - 0%3B Other Eukaryotes - 63 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G18750 AGAMOUS-like 65 Encodes a member of the MIKC (MADS box%2C Keratin binding domain%2C and C terminal domain containing )family of transcriptional regulators. AGL65 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth. AGAMOUS-like 65 (AGL65)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: pollen development%3B LOCATED IN: nucleus%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 30 (TAIR:AT2G03060.2)%3B Has 6713 Blast hits to 6650 proteins in 771 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 853%3B Fungi - 361%3B Plants - 5148%3B Viruses - 0%3B Other Eukaryotes - 351 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT2G03060 AGAMOUS-like 30 Encodes a member of the MIKC (MADS box%2C Keratin binding domain%2C and C terminal domain containing )family of transcriptional regulators. AGL30 is expressed in pollen.It forms heterodimers with other MICK family members. AGAMOUS-like 30 (AGL30)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: pollen development%3B LOCATED IN: nucleus%3B EXPRESSED IN: petal%2C leaf whorl%2C male gametophyte%2C flower%2C pollen tube%3B EXPRESSED DURING: M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 94 (TAIR:AT1G69540.1)%3B Has 5791 Blast hits to 5791 proteins in 704 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 613%3B Fungi - 306%3B Plants - 4796%3B Viruses - 0%3B Other Eukaryotes - 76 (source: NCBI BLink). Chr2 + View
Amborella trichopoda ATR0564G025 AmTr_v1.0_scaffold00010 + View
Brassica carinata BcaB03g12962 ChrB03 - View
Brassica carinata BcaC07g38943 ChrC07 + View
Brassica carinata BcaC08g46394 ChrC08 - View
Brassica carinata BcaC06g34022 ChrC06 - View
Brassica carinata BcaB03g14723 ChrB03 - View
Brassica napus C08p18910 C08 + View
Brassica napus A08p30230 A08 - View
Brassica napus C06p40290 C06 + View
Brassica napus C07p33630 C07 + View
Brassica napus A09p59690 A09 - View
Brassica napus A07p35880 A07 - View
Brassica oleracea BolC2t08714H C2 - View
Brassica oleracea BolC6t39401H C6 - View
Brassica oleracea BolC8t49515H C8 + View
Brassica rapa BraA09t41346Z A09 - View
Brassica rapa BraA07t31173Z A07 - View
Beta vulgaris EL10Ac5g11033 PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED Chr5_EL10_PGA_scaffold2 + View
Beta vulgaris EL10Ac6g13229 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN Chr6_EL10_PGA_scaffold0 + View
Camellia sinensis var. sinensis CSS0026210 PREDICTED: agamous-like MADS-box protein AGL17 [Vitis vinifera] Chr2 - View
Cannabis sativa CANSAT80G2286 NC_044372.1 - View
Cicer arietinum L. Ca_21814_v3 Ca_LG7_v3 - View
Corylus avellana Haze_11995 Similar to AGL30: Agamous-like MADS-box protein AGL30 (Arabidopsis thaliana OX%3D3702) 9 - View
Corylus avellana Haze_07310 Similar to AGL65: Agamous-like MADS-box protein AGL65 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc04_g16420 Putative uncharacterized protein chr4 - View
Citrus clementina Ciclev10031963m.g scaffold_4 + View
Cardamine hirsuta CARHR019390 MADS-box transcription factor Chr1 + View
Cardamine hirsuta CARHR062500 MADS-box transcription factor Chr2 - View
Carya illinoinensis CiPaw.06G086700 PTHR11945//PTHR11945:SF169 - MADS BOX PROTEIN // MADS-BOX FAMILY PROTEIN Chr06 + View
Carya illinoinensis CiPaw.05G133000 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN Chr05 - View
Carya illinoinensis CiPaw.12G012500 PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED Chr12 + View
Citrullus lanatus ClCG05G024160 MADS-box transcription factor 2 CG_Chr05 - View
Citrullus lanatus ClCG04G012180 Mads box protein, putative CG_Chr04 - View
Cucumis melo MELO3C001991.2 Mads box protein, putative chr12 - View
Cucumis melo MELO3C012107.2 Mads box protein, putative chr10 - View
Corchorus olitorius COL.COLO4_22947 Transcription factor%2C MADS-box AWUE01018132.1 - View
Carica papaya Cpa.g.sc1.45 supercontig_1 - View
Chenopodium quinoa AUR62021664 AGL65: Agamous-like MADS-box protein AGL65 C_Quinoa_Scaffold_1675 - View
Chenopodium quinoa AUR62008429 AGL65: Agamous-like MADS-box protein AGL65 C_Quinoa_Scaffold_3422 + View
Chenopodium quinoa AUR62005812 AGL30: Agamous-like MADS-box protein AGL30 C_Quinoa_Scaffold_1214 + View
Capsella rubella Carub.0002s2124 scaffold_2 + View
Capsella rubella Carub.0002s1619 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN scaffold_2 - View
Capsella rubella Carub.0005s0191 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN scaffold_5 + View
Capsella rubella Carub.0001s1840 PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED scaffold_1 + View
Cucumis sativus L. CsaV3_1G005580 Agamous-like MADS-box protein chr1 + View
Cucumis sativus L. CsaV3_5G032860 Agamous-like MADS-box protein chr5 + View
Daucus carota DCAR_007167 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_016567 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv38727 GWHABJS00000019 - View
Davidia involucrata Dinv16662 GWHABJS00000018 + View
Davidia involucrata Dinv34139 GWHABJS00000008 - View
Durio zibethinus Duzib248G0439 NW_019168048.1 + View
Durio zibethinus Duzib205G1152 NW_019168381.1 - View
Durio zibethinus Duzib268G0595 NW_019168270.1 - View
Durio zibethinus Duzib068G1234 NW_019167838.1 - View
Durio zibethinus Duzib251G0307 NW_019167971.1 - View
Erigeron canadensis ECA246G5049 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.B00522 Chr02 + View
Erythranthe guttata Migut.I00190 scaffold_9 + View
Eutrema salsugineum Thhalv10018691m.g PTHR11945:SF156 - MADS-BOX PROTEIN-RELATED scaffold_9 + View
Eutrema salsugineum Thhalv10007954m.g PTHR11945:SF156 - MADS-BOX PROTEIN-RELATED scaffold_5 - View
Eutrema salsugineum Thhalv10004409m.g PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN scaffold_6 - View
Fragaria x ananassa FAN12G3985 PTHR11945//PTHR11945:SF169 - MADS BOX PROTEIN // MADS-BOX FAMILY PROTEIN Fvb4-3 - View
Fragaria x ananassa FAN17G3096 PTHR11945//PTHR11945:SF169 - MADS BOX PROTEIN // MADS-BOX FAMILY PROTEIN Fvb4-2 - View
Fragaria x ananassa FAN22G1026 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN Fvb4-1 + View
Fragaria x ananassa FAN07G1123 PTHR11945//PTHR11945:SF169 - MADS BOX PROTEIN // MADS-BOX FAMILY PROTEIN Fvb4-4 - View
Fragaria vesca FvH4_5g14780 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN Fvb5 - View
Fragaria vesca FvH4_4g31160 PTHR11945//PTHR11945:SF169 - MADS BOX PROTEIN // MADS-BOX FAMILY PROTEIN Fvb4 + View
Gossypium hirsutum Gohir.A12G178400 PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED A12 - View
Gossypium hirsutum Gohir.D12G180800 PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED D12 - View
Gossypium hirsutum Gohir.D13G076000 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN D13 + View
Gossypium hirsutum Gohir.A13G076400 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN A13 + View
Glycine max Glyma.17G101300 PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED Gm17 + View
Glycine max Glyma.05G025700 PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED Gm05 - View
Gossypium raimondii Gorai.013G086600 Chr13 + View
Gossypium raimondii Gorai.005G142100 Chr05 + View
Gossypium raimondii Gorai.008G194100 Chr08 - View
Lupinus albus Lalb_Chr07g0178101 PTHR11945//PTHR11945:SF156 - MADS BOX PROTEIN // MADS-BOX PROTEIN-RELATED Lalb_Chr07 + View
Lupinus albus Lalb_Chr10g0098411 PTHR11945//PTHR11945:SF169 - MADS BOX PROTEIN // MADS-BOX FAMILY PROTEIN Lalb_Chr10 + View
Lupinus albus Lalb_Chr13g0303151 PTHR11945:SF156 - MADS-BOX PROTEIN-RELATED Lalb_Chr13 - View
Lupinus albus Lalb_Chr17g0340811 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN Lalb_Chr17 + View
Lotus japonicus Lj4g0007316 PTHR11945:SF156 - MADS-BOX PROTEIN-RELATED chr4 - View
Lonicera japonica Lj6A786G69 GWHAAZE00000006 - View
Lactuca sativa Lsat_1_v5_gn_9_27060 Lsat_1_v8_lg_5 - View
Magnolia biondii MBI02_g12267_MAGBIO AED:0.16 Chr02 - View
Magnolia biondii MBI05_g10771_MAGBIO AED:0.25 Chr05 - View
Malus domestica MD13G1070300 AGAMOUS-like 30 Chr13 - View
Malus domestica MD16G1070700 AGAMOUS-like 30 Chr16 - View
Malus domestica MD14G1201900 AGAMOUS-like 65 Chr14 + View
Malus domestica MD06G1194900 AGAMOUS-like 65 Chr06 + View
Medicago truncatula Medtr5g041650 MADS-box transcription factor family protein chr5 + View
Medicago truncatula Medtr4g108720 MADS-box transcription factor family protein chr4 + View
Nelumbo nucifera Nn4g23208 chr4 + View
Nelumbo nucifera Nn3g17279 chr3 + View
Nicotiana tabacum Nitab4.5_0001128g0050 Unknown Nitab4.5_0001128 - View
Olea europaea Oeu002089.1 chr18 - View
Petunia axillaris Peaxi162Scf00274g00457 AGAMOUS-like 30 Peaxi162Scf00274 - View
Punica granatum PGR083G0186 NC_045133.1 + View
Prunus persica Prupe.1G276600 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN Pp01 + View
Pisum sativum Psat4g050040 SRF-type transcription factor (DNA-binding and dimerisation domain) chr4LG4 - View
Populus trichocarpa Potri.010G167300 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN Chr10 - View
Populus trichocarpa Potri.008G088200 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN Chr08 + View
Phaseolus vulgaris Phvul.002G172350 PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN Chr02 + View
Phaseolus vulgaris Phvul.003G189100 PTHR11945:SF156 - MADS-BOX PROTEIN-RELATED Chr03 - View
Rosa chinensis RcHm_v2.0_Chr7g0181601 RcHm_v2.0_Chr7 + View
Rosa chinensis RcHm_v2.0_Chr4g0439551 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim12G0155800 chr12 - View
Striga asiatica SGA_v2.0_scaffold25G10919 scaffold25 + View
Striga asiatica SGA_v2.0_scaffold56G19998 scaffold56 - View
Salvia bowleyana SalBow5G0823 GWHASIU00000003 - View
Salix brachista Sabra08G0065900 GWHAAZH00000008 + View
Salix brachista Sabra10G0127100 GWHAAZH00000010 - View
Simmondsia chinensis Sc12g0006430 GWHAASQ00000012 + View
Sechium edule Sed0010468 LG06 - View
Sechium edule Sed0017917 LG01 - View
Sechium edule Sed0013054 LG07 + View
Schrenkiella parvula Sp2g14060 PTHR11945//PTHR11945:SF169 - MADS BOX PROTEIN // MADS-BOX FAMILY PROTEIN ch2-4 + View
Schrenkiella parvula Sp5g24670 PTHR11945//PTHR11945:SF169 - MADS BOX PROTEIN // MADS-BOX FAMILY PROTEIN ch5-6 - View
Solanum pennellii Sopen03g034890 hypothetical protein Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400019525 MADS-box family protein ST4.03ch03 - View
Selenicereus undatus Hund02639 Scaffold_33678 - View
Selenicereus undatus Hund25225 Scaffold_3410 - View
Theobroma cacao Thecc.02G343900 AGAMOUS-like 65 Chromosome_2 - View
Theobroma cacao Thecc.03G090700 AGAMOUS-like 65 Chromosome_3 - View
Tarenaya hassleriana THA.LOC104805166 agamous-like MADS-box protein AGL30 NW_010961290.1 + View
Tarenaya hassleriana THA.LOC104822049 agamous-like MADS-box protein AGL30 isoform X1 NW_010966617.1 - View
Trifolium pratense TPR.G39248 Tp57577_TGAC_v2_LG3 + View
Trifolium pratense TPR.G9249 Tp57577_TGAC_v2_scaf_550 - View
Vitis vinifera GSVIVG01007989001 chr17 + View