Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Manes.15G055800 Chromosome15 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr4.1605 chr4 - View
Actinidia chinensis Actinidia11450 Lachesis_group21 + View
Actinidia chinensis Actinidia30057 Lachesis_group24 + View
Arabidopsis lyrata AL8G21690 scaffold_8 - View
Arabidopsis thaliana AT5G48655 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to chitin%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G07200.2)%3B Has 4604 Blast hits to 4589 proteins in 307 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2946%3B Fungi - 673%3B Plants - 438%3B Viruses - 20%3B Other Eukaryotes - 527 (source: NCBI BLink). RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to chitin%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G07200.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC06g30772 ChrC06 + View
Brassica napus C07p39320 C07 - View
Brassica napus A06p39020 A06 + View
Brassica oleracea BolC7t44452H C7 - View
Brassica rapa BraA06t26815Z A06 + View
Beta vulgaris EL10Ac7g17892 PTHR23041//PTHR23041:SF63 - RING FINGER DOMAIN-CONTAINING // C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0005528 PREDICTED: E3 ubiquitin-protein ligase RNF4-like [Nicotiana tomentosiformis] Chr11 + View
Camellia sinensis var. sinensis CSS0013742 PREDICTED: uncharacterized RING finger protein C548.05c-like [Nelumbo nucifera] Chr9 + View
Cannabis sativa CANSAT01G2920 NC_044373.1 - View
Corylus avellana Haze_11641 Protein of unknown function 9 + View
Coffea canephora Cc01_g16770 Putative RING/U-box superfamily protein chr1 - View
Citrus clementina Ciclev10022263m.g scaffold_3 - View
Citrus clementina Ciclev10006888m.g scaffold_9 - View
Carpinus fangiana Cfa014951 Cfa06 + View
Citrullus lanatus ClCG07G002050 RING finger protein, putative CG_Chr07 + View
Citrullus lanatus ClCG05G003190 E3 ubiquitin-protein ligase RNF8 CG_Chr05 - View
Cucumis melo MELO3C006300.2 E3 ubiquitin ligase RNF4 chr06 - View
Carica papaya Cpa.g.sc8.125 supercontig_8 - View
Capsella rubella Carub.0008s0834 PTHR23041:SF63 - C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED scaffold_8 - View
Daucus carota DCAR_012667 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_004734 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv19179 GWHABJS00000010 - View
Davidia involucrata Dinv12654 GWHABJS00000007 + View
Davidia involucrata Dinv38194 GWHABJS00000016 - View
Durio zibethinus Duzib211G0537 NW_019168049.1 + View
Durio zibethinus Duzib133G1084 NW_019167938.1 + View
Durio zibethinus Duzib138G0225 NW_019167893.1 + View
Erigeron canadensis ECA247G3682 Conyza_canadensis_scaffold:7 - View
Fragaria x ananassa FAN15G3756 PTHR23041:SF63 - C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED Fvb2-4 - View
Fragaria x ananassa FAN17G2064 PTHR23041//PTHR23041:SF63 - RING FINGER DOMAIN-CONTAINING // C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED Fvb4-2 + View
Fragaria x ananassa FAN27G2188 PTHR23041:SF63 - C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED Fvb2-1 - View
Fragaria x ananassa FAN07G1805 PTHR23041:SF63 - C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED Fvb4-4 + View
Fragaria x ananassa FAN12G3973 PTHR23041:SF63 - C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED Fvb4-3 - View
Fragaria x ananassa FAN22G0167 PTHR23041:SF63 - C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED Fvb4-1 - View
Fragaria vesca FvH4_4g13470 PTHR23041:SF63 - C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED Fvb4 - View
Gossypium hirsutum Gohir.D11G145700 PTHR23041:SF63 - C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED D11 + View
Gossypium hirsutum Gohir.A07G199400 PTHR23041:SF63 - C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED A07 - View
Gossypium hirsutum Gohir.D07G205800 PTHR23041:SF63 - C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED D07 - View
Gossypium raimondii Gorai.001G231800 Chr01 - View
Gossypium raimondii Gorai.007G156200 Chr07 + View
Lonicera japonica Lj6A392G26 GWHAAZE00000006 - View
Lactuca sativa Lsat_1_v5_gn_9_15241 Lsat_1_v8_lg_9 + View
Lactuca sativa Lsat_1_v5_gn_8_89640 Lsat_1_v8_lg_8 - View
Nicotiana tabacum Nitab4.5_0000045g0450 Zinc finger, C3HC4 RING-type, Zinc finger, RING/FYVE/PHD-type, Zinc finger, RING-type, Zinc finger, RING-type, conserved site Nitab4.5_0000045 + View
Olea europaea Oeu002916.1 chr11 - View
Punica granatum PGR044G0119 NC_045134.1 + View
Punica granatum PGR083G1441 NC_045133.1 - View
Prunus persica Prupe.8G199600 PTHR23041:SF63 - C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED Pp08 - View
Rosa chinensis RcHm_v2.0_Chr4g0414081 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim02G0060800 chr02 + View
Rhododendron simsii Rhsim13G0047300 chr13 + View
Rhododendron simsii Rhsim01G0254000 chr01 - View
Sechium edule Sed0024686 LG02 + View
Sechium edule Sed0026631 LG12 - View
Schrenkiella parvula Sp2g19060 PTHR23041//PTHR23041:SF63 - RING FINGER DOMAIN-CONTAINING // C3HC4 ZINC FINGER DOMAIN-CONTAINING PROTEIN-RELATED ch2-4 - View
Selenicereus undatus Hund18428 Scaffold_33675 + View
Trochodendron aralioides TAR362G0418 group17 + View
Trochodendron aralioides TAR636G2916 group1 - View
Trochodendron aralioides TAR365G0852 group16 - View
Theobroma cacao Thecc.01G221100 RING/U-box superfamily protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104802660 E3 ubiquitin-protein ligase RNF4-like NW_010970490.1 - View
Tripterygium wilfordii TWI36G0113 NC_052237.1 - View
Tripterygium wilfordii TWI75G1449 NC_052253.1 - View
Tripterygium wilfordii TWI18G0693 NC_052241.1 + View
Vaccinium macrocarpon vmacro15556 Protein of unknown function chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro02780 Protein of unknown function chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01020997001 chr5 - View