Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Manes.01G168100 Chromosome01 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G15730 LG-4 - View
Acer truncatum Atru.chr1.141 chr1 + View
Actinidia chinensis Actinidia08538 Lachesis_group24 + View
Arabidopsis lyrata AL5G25810 scaffold_5 - View
Arabidopsis lyrata AL8G35490 scaffold_8 + View
Aquilegia oxysepala Aqoxy1G00818 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A66RTB PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.J8TVHJ PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT3G46790 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB%2C which is essential for ndhB translation. CHLORORESPIRATORY REDUCTION 2 (CRR2)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT3G57430.1)%3B Has 36401 Blast hits to 13536 proteins in 261 species: Archae - 0%3B Bacteria - 8%3B Metazoa - 92%3B Fungi - 72%3B Plants - 35786%3B Viruses - 0%3B Other Eukaryotes - 443 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G59200 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a chloroplast RNA editing factor. ORGANELLE TRANSCRIPT PROCESSING 80 (OTP80)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G37380.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC04g19819 ChrC04 - View
Brassica carinata BcaB08g36286 ChrB08 - View
Brassica carinata BcaC09g49775 ChrC09 - View
Brassica napus A01p26010 A01 + View
Brassica oleracea BolC1t03247H C1 + View
Brassica rapa BraA10t43716Z A10 + View
Brassica rapa BraA01t02519Z A01 + View
Cannabis sativa CANSAT54G2957 NC_044375.1 + View
Corylus avellana Haze_24190 Similar to CRR2: Pentatricopeptide repeat-containing protein At3g46790, chloroplastic (Arabidopsis thaliana OX%3D3702) 6 - View
Cardamine hirsuta CARHR132270 Pentatricopeptide repeat-containing protein Chr4 - View
Cardamine hirsuta CARHR154870 Pentatricopeptide repeat-containing protein Chr5 + View
Cardamine hirsuta CARHR285360 Pentatricopeptide repeat-containing protein NSCAFA.214I + View
Carya illinoinensis CiPaw.14G064300 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr14 + View
Citrullus lanatus ClCG03G001250 Pentatricopeptide repeat-containing protein CG_Chr03 - View
Citrullus lanatus ClCG02G019920 Pentatricopeptide repeat-containing protein, putative CG_Chr02 - View
Cucumis melo MELO3C020604.2 Pentatricopeptide repeat-containing protein chr12 - View
Corchorus olitorius COL.COLO4_18590 hypothetical protein AWUE01016479.1 - View
Carica papaya Cpa.g.sc81.64 supercontig_81 + View
Chenopodium quinoa AUR62020023 PCMP-E1: Pentatricopeptide repeat-containing protein At5g59600 C_Quinoa_Scaffold_2465 - View
Chenopodium quinoa AUR62001726 CRR2: Pentatricopeptide repeat-containing protein At3g46790, chloroplastic C_Quinoa_Scaffold_2716 + View
Capsella rubella Carub.0005s1304 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_5 - View
Capsella rubella Carub.0008s1975 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_8 + View
Capsella rubella Carub.0004s2186 PTHR11240//PTHR11240:SF16 - RIBONUCLEASE T2 // RIBONUCLEASE 2 scaffold_4 + View
Daucus carota DCAR_005947 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_015649 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_007423 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv43096 GWHABJS00000085 + View
Durio zibethinus Duzib150G1099 NW_019167882.1 - View
Durio zibethinus Duzib168G1057 NW_019168159.1 + View
Erigeron canadensis ECA236G5023 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.A00839 Chr01 + View
Eucalyptus grandis Eucgr.J02000 Chr10 + View
Erythranthe guttata Migut.D02055 scaffold_4 - View
Erythranthe guttata Migut.D00872 scaffold_4 + View
Eutrema salsugineum Thhalv10015737m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_2 - View
Eutrema salsugineum Thhalv10002433m.g PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_4 + View
Fragaria x ananassa FAN25G0228 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb3-1 + View
Gossypium hirsutum Gohir.D03G120933 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) D03 + View
Glycine max Glyma.11G136400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm11 + View
Glycine max Glyma.14G066100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm14 - View
Glycine max Glyma.02G250600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm02 + View
Gossypium raimondii Gorai.003G128500 Chr03 + View
Gossypium raimondii Gorai.012G071200 Chr12 + View
Helianthus annuus HanXRQChr01g0008071 Probable nascent polypeptide-associated complex subunit alpha-like protein 3 HanXRQChr01 - View
Hydrangea macrophylla Hma1.2p1_0274F.1_g110470 Hma1.2p1_0274F.1 + View
Lonicera japonica Lj1P145T36 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_5_169761 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lsat_1_v8_lg_5 + View
Magnolia biondii MBI14_g09008_MAGBIO AED:0.34 Chr14 - View
Olea europaea Oeu004185.1 chr4 - View
Oryza sativa ssp. japonica Os03g0271300 Similar to Pentatricopeptide repeat protein PPR868-14. chr03 + View
Oryza sativa ssp. japonica Os05g0455900 Pentatricopeptide repeat domain containing protein. chr05 + View
Oryza sativa ssp. japonica Os01g0848300 Pentatricopeptide repeat domain containing protein. chr01 - View
Punica granatum PGR004G2492 NC_045131.1 + View
Papaver somniferum PSO063G0685 NC_039364.1 - View
Populus trichocarpa Potri.006G090900 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr06 - View
Populus trichocarpa Potri.001G243800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr01 - View
Phaseolus vulgaris Phvul.008G230800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr08 + View
Phaseolus vulgaris Phvul.011G062000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr11 + View
Rhododendron simsii Rhsim01G0232700 chr01 - View
Rhododendron simsii Rhsim13G0077500 chr13 - View
Salix brachista Sabra09G0026800 GWHAAZH00000009 - View
Salix brachista Sabra06G0068700 GWHAAZH00000006 - View
Salix brachista Sabra16G0148000 GWHAAZH00000016 - View
Sechium edule Sed0024609 LG14 - View
Sechium edule Sed0007330 LG01 - View
Solanum lycopersicum Solyc06g005690.3 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G2WHX5_CAPBA) SL4.0ch06 - View
Schrenkiella parvula Sp5g14920 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) ch5-1 + View
Schrenkiella parvula Sp6g20790 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch6-6 + View
Solanum tuberosum PGSC0003DMG400002145 Pentatricopeptide repeat-containing protein ST4.03ch06 - View
Selenicereus undatus Hund04924 Scaffold_19641 - View
Trochodendron aralioides TAR633G0143 group2 + View
Trochodendron aralioides TAR636G2031 group1 - View
Trochodendron aralioides TAR369G0314 group18 - View
Theobroma cacao Thecc.09G313500 Tetratricopeptide repeat (TPR)-like superfamily protein Chromosome_9 + View
Tarenaya hassleriana THA.LOC104799425 pentatricopeptide repeat-containing protein At3g46790%2C chloroplastic NW_010968505.1 + View
Tarenaya hassleriana THA.LOC104814883 pentatricopeptide repeat-containing protein At5g59600 NW_010965541.1 - View
Trifolium pratense TPR.G5580 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI79G0327 NC_052238.1 + View
Vaccinium macrocarpon vmacro03032 Similar to PCMP-H40: Pentatricopeptide repeat-containing protein At1g11290, chloroplastic (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01024870001 chr6 - View
Zea mays Zm00001eb012150 Zm00001e001200 Pentatricopeptide repeat-containing protein 1 + View