Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Manes.14G092100 Chromosome14 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G12870 LG-5 - View
Acer truncatum Atru.BG.291.p chr11 + View
Acer truncatum Atru.chr8.684 chr8 - View
Actinidia chinensis Actinidia36281 Lachesis_group4 - View
Actinidia chinensis Actinidia35058 Lachesis_group2 - View
Actinidia chinensis Actinidia13416 Lachesis_group12 + View
Arabidopsis lyrata AL3G11620 scaffold_3 - View
Avicennia marina MSTRG.7720 ScioBoG_102841_HRSCAF_103114 + View
Avicennia marina MSTRG.2963 ScioBoG_102835_HRSCAF_103059 + View
Aquilegia oxysepala Aqoxy3G00580 CHR03 - View
Aquilegia oxysepala Aqoxy3G03765 CHR03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LPZU08 PF01535 - PPR repeat (PPR) arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QNR046 PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT3G02330 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G39530.1)%3B Has 56701 Blast hits to 14050 proteins in 283 species: Archae - 2%3B Bacteria - 22%3B Metazoa - 148%3B Fungi - 141%3B Plants - 55528%3B Viruses - 0%3B Other Eukaryotes - 860 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT3G30540 Glycosyl hydrolase superfamily protein Glycosyl hydrolase superfamily protein%3B FUNCTIONS IN: cation binding%2C hydrolase activity%2C hydrolyzing O-glycosyl compounds%2C catalytic activity%3B INVOLVED IN: carbohydrate metabolic process%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Glycoside hydrolase%2C family 5 (InterPro:IPR001547)%2C Glycoside hydrolase%2C catalytic core (InterPro:IPR017853)%2C Glycoside hydrolase%2C subgroup%2C catalytic core (InterPro:IPR013781)%3B BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT3G10900.1)%3B Has 710 Blast hits to 700 proteins in 174 species: Archae - 7%3B Bacteria - 189%3B Metazoa - 0%3B Fungi - 183%3B Plants - 303%3B Viruses - 0%3B Other Eukaryotes - 28 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT1G68930 pentatricopeptide (PPR) repeat-containing protein pentatricopeptide (PPR) repeat-containing protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1)%3B Has 47331 Blast hits to 14466 proteins in 272 species: Archae - 2%3B Bacteria - 18%3B Metazoa - 110%3B Fungi - 135%3B Plants - 46381%3B Viruses - 0%3B Other Eukaryotes - 685 (source: NCBI BLink). Chr1 + View
Amborella trichopoda ATR0691G147 AmTr_v1.0_scaffold00006 - View
Brassica carinata BcaB03g15452 ChrB03 + View
Brassica carinata BcaC09g47693 ChrC09 - View
Brassica carinata BcaB03g15865 ChrB03 + View
Brassica napus BNapus_Darmor_BZH_scaffold_208p00130 BNapus_Darmor_BZH_scaffold_208 + View
Brassica napus A04p11690 A04 + View
Brassica oleracea BolC1t05912H C1 + View
Brassica rapa BraA04t16836Z A04 + View
Brassica rapa BraSC141t45621Z Brapa_scaffold_141 - View
Beta vulgaris EL10Ac2g04619 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr2_EL10_PGA_scaffold6 + View
Beta vulgaris EL10Ac5g11202 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr5_EL10_PGA_scaffold2 - View
Beta vulgaris EL10Ac6g14655 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr6_EL10_PGA_scaffold0 - View
Beta vulgaris EL10Ac2g04406 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr2_EL10_PGA_scaffold6 + View
Camellia sinensis var. sinensis CSS0025927 PREDICTED: pentatricopeptide repeat-containing protein At1g18485 [Vitis vinifera] Chr2 + View
Camellia sinensis var. sinensis CSS0040520 PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like [Nelumbo nucifera] Chr12 + View
Cannabis sativa CANSAT64G0996 NC_044379.1 + View
Corylus avellana Haze_14355 Similar to PCMP-E90: Pentatricopeptide repeat-containing protein At3g02330, mitochondrial (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc11_g11370 Putative pentatricopeptide repeat-containing protein At1g68930 chr11 + View
Coffea canephora Cc07_g04680 Pentatricopeptide repeat-containing protein At3g02330 chr7 - View
Citrus clementina Ciclev10018700m.g scaffold_3 - View
Citrus clementina Ciclev10033304m.g scaffold_4 + View
Citrus clementina Ciclev10013459m.g scaffold_6 + View
Citrus clementina Ciclev10011041m.g scaffold_6 - View
Ceratophyllum demersum CDE10G0072 8 + View
Carpinus fangiana Cfa007719 Cfa03 - View
Cardamine hirsuta CARHR061800 Pentatricopeptide repeat-containing protein Chr2 + View
Cardamine hirsuta CARHR076310 Pentatricopeptide repeat-containing protein Chr3 - View
Carya illinoinensis CiPaw.03G008800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr03 + View
Carya illinoinensis CiPaw.03G080800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr03 + View
Citrullus lanatus ClCG05G023420 Pentatricopeptide repeat-containing family protein CG_Chr05 + View
Citrullus lanatus ClCG06G015350 Pentatricopeptide repeat protein CG_Chr06 + View
Cucumis melo MELO3C012176.2 Pentatricopeptide repeat-containing protein chr10 + View
Carica papaya Cpa.g.sc1.174 supercontig_1 - View
Chenopodium quinoa AUR62007847 PCMP-H22: Putative pentatricopeptide repeat-containing protein At1g68930 C_Quinoa_Scaffold_2646 + View
Chenopodium quinoa AUR62039688 PCMP-H8: Pentatricopeptide repeat-containing protein At1g18485 C_Quinoa_Scaffold_1452 - View
Capsella rubella Carub.0003s0144 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_3 - View
Cucumis sativus L. CsaV3_5G033590 Pentatricopeptide repeat-containing protein chr5 - View
Daucus carota DCAR_026293 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_025464 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv36825 GWHABJS00000006 + View
Davidia involucrata Dinv33883 GWHABJS00000014 - View
Davidia involucrata Dinv15570 GWHABJS00000018 + View
Davidia involucrata Dinv33995 GWHABJS00000008 + View
Durio zibethinus Duzib211G0053 NW_019168049.1 - View
Durio zibethinus Duzib251G0862 NW_019167971.1 + View
Durio zibethinus Duzib133G1152 NW_019167938.1 - View
Erigeron canadensis ECA246G2963 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA246G2547 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.I02086 Chr09 - View
Eucalyptus grandis Eucgr.B00648 Chr02 - View
Erythranthe guttata Migut.L01150 scaffold_12 + View
Erythranthe guttata Migut.H00572 scaffold_8 + View
Eutrema salsugineum Thhalv10005541m.g PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_6 - View
Fragaria x ananassa FAN02G0037 PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Fvb6-4 + View
Fragaria x ananassa FAN09G2532 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-2 - View
Fragaria x ananassa FAN13G2604 PF14432 - DYW family of nucleic acid deaminases (DYW_deaminase) Fvb5-2 + View
Fragaria x ananassa FAN05G1793 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-3 - View
Fragaria x ananassa FAN17G0072 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb4-2 - View
Fragaria x ananassa FAN22G1806 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb4-1 + View
Fragaria x ananassa FAN14G1225 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-1 + View
Fragaria vesca FvH4_6g45980 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6 + View
Fragaria vesca FvH4_5g13240 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb5 + View
Gossypium hirsutum Gohir.D13G086500 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D13 - View
Glycine max Glyma.04G158200 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Gm04 + View
Glycine max Glyma.06G206900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm06 - View
Gossypium raimondii Gorai.013G098500 Chr13 - View
Hydrangea macrophylla Hma1.2p1_0588F.1_g184600 Hma1.2p1_0588F.1 + View
Lupinus albus Lalb_Chr17g0336731 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr17 + View
Lotus japonicus Lj2g0001221 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) chr2 + View
Lotus japonicus Lj1g0019122 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) chr1 + View
Lotus japonicus Lj1g0005612 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) chr1 + View
Lonicera japonica Lj7C0T0 GWHAAZE00000007 + View
Lonicera japonica Lj3C1026T2 GWHAAZE00000003 + View
Lactuca sativa Lsat_1_v5_gn_5_24421 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Lsat_1_v8_lg_5 - View
Magnolia biondii MBI19_g00154_MAGBIO AED:0.03 Chr19 - View
Magnolia biondii MBI15_g26769_MAGBIO AED:0.61 Chr15 - View
Malus domestica MD13G1054800 pentatricopeptide (PPR) repeat-containing protein Chr13 + View
Malus domestica MD06G1207000 Pentatricopeptide repeat (PPR) superfamily protein Chr06 - View
Malus domestica MD09G1077700 Pentatricopeptide repeat (PPR) superfamily protein Chr09 - View
Malus domestica MD16G1053700 pentatricopeptide (PPR) repeat-containing protein Chr16 + View
Malus domestica MD17G1068000 Pentatricopeptide repeat (PPR) superfamily protein Chr17 - View
Medicago truncatula Medtr7g017700 PPR containing plant-like protein chr7 - View
Nelumbo nucifera Nn4g23581 chr4 - View
Nicotiana tabacum Nitab4.5_0000259g0020 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0000259 + View
Olea europaea Oeu062193.1 chr10 - View
Olea europaea Oeu032845.1 chr18 - View
Petunia axillaris Peaxi162Scf00188g00083 Pentatricopeptide repeat-containing protein Peaxi162Scf00188 + View
Punica granatum PGR102G3199 NC_045129.1 - View
Punica granatum PGR004G1382 NC_045131.1 + View
Punica granatum PGR083G0726 NC_045133.1 - View
Prunus persica Prupe.5G211400 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp05 - View
Prunus persica Prupe.3G245900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp03 + View
Prunus persica Prupe.1G297100 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp01 - View
Pisum sativum Psat3g194200 PPR repeat family chr3LG5 + View
Pisum sativum Psat1g064920 PPR repeat family chr1LG6 - View
Papaver somniferum PSO478G2081 NC_039361.1 + View
Papaver somniferum PSO782G1263 NC_039365.1 - View
Papaver somniferum PSO017G5766 NC_039362.1 - View
Populus trichocarpa Potri.010G136200 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr10 + View
Populus trichocarpa Potri.004G111300 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr04 + View
Populus trichocarpa Potri.008G113101 PF01535 - PPR repeat (PPR) Chr08 - View
Phaseolus vulgaris Phvul.008G023900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr08 + View
Phaseolus vulgaris Phvul.009G204200 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr09 + View
Quercus lobata QL02p054743 CM012294 + View
Quercus lobata QL10p021422 10 - View
Rosa chinensis RcHm_v2.0_Chr7g0183921 RcHm_v2.0_Chr7 - View
Rosa chinensis RcHm_v2.0_Chr4g0437061 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim10G0061100 chr10 - View
Rhododendron simsii Rhsim09G0119200 chr09 + View
Striga asiatica SGA_v2.0_scaffold4G02350 scaffold4 + View
Striga asiatica SGA_v2.0_scaffold16G07838 scaffold16 - View
Salix brachista Sabra10G0104700 GWHAAZH00000010 + View
Salix brachista Sabra04G0073200 GWHAAZH00000004 - View
Simmondsia chinensis Sc10g0000480 GWHAASQ00000010 + View
Sechium edule Sed0021977 LG11 - View
Sechium edule Sed0005923 LG06 - View
Sechium edule Sed0022984 LG07 + View
Solanum lycopersicum Solyc03g114660.1 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2G3A1V3_CAPAN) SL4.0ch03 + View
Solanum lycopersicum Solyc05g010620.3 Pentatricopeptide repeat (AHRD V3.3 *** A0A200Q0T0_9MAGN) SL4.0ch05 + View
Schrenkiella parvula Sp5g24070 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch5-6 + View
Schrenkiella parvula Sp3g01390 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch3-1 - View
Schrenkiella parvula Sp2g14680 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch2-4 + View
Solanum pennellii Sopen03g033730 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch03 + View
Solanum pennellii Sopen05g006430 pentatricopeptide (PPR) repeat-containing protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG402024517 Pentatricopeptide repeat-containing protein ST4.03ch03 + View
Solanum tuberosum PGSC0003DMG400019658 Pentatricopeptide repeat-containing protein ST4.03ch05 - View
Trochodendron aralioides TAR374G1557 group12 - View
Trochodendron aralioides TAR629G2452 group0 - View
Trochodendron aralioides TAR629G2974 group0 - View
Trochodendron aralioides TAR371G1263 group13 - View
Theobroma cacao Thecc.04G149700 Mannan endo-1 Chromosome_4 + View
Theobroma cacao Thecc.04G110900 Pentatricopeptide repeat (PPR) superfamily protein Chromosome_4 - View
Tarenaya hassleriana THA.LOC104821986 putative pentatricopeptide repeat-containing protein At1g68930 NW_010966617.1 + View
Tarenaya hassleriana THA.LOC104827144 pentatricopeptide repeat-containing protein At3g02330 NW_010967707.1 - View
Tarenaya hassleriana THA.LOC104818376 pentatricopeptide repeat-containing protein At5g08305 NW_010966092.1 - View
Trifolium pratense TPR.G3273 Tp57577_TGAC_v2_scaf_82 - View
Trifolium pratense TPR.G23385 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI34G0230 NC_052235.1 + View
Tripterygium wilfordii TWI31G1054 NC_052233.1 + View
Vaccinium macrocarpon vmacro10469 Similar to PCMP-H24: Pentatricopeptide repeat-containing protein At4g02750 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G0459 CM024070.1 + View
Vitis vinifera GSVIVG01008173001 chr17 + View
Vitis vinifera GSVIVG01036511001 chr14 + View
Zea mays Zm00001eb315860 Zm00001e034445 Pentatricopeptide repeat-containing protein 7 + View