Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
MSTRG.11477 ScioBoG_14204_HRSCAF_14270 + View
MSTRG.7916 ScioBoG_102841_HRSCAF_103114 + View
MSTRG.575 ScioBoG_102831_HRSCAF_103044 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr11.2091 chr11 + View
Acer truncatum Atru.chr9.2533 chr9 + View
Actinidia chinensis Actinidia19117 Lachesis_group9 - View
Actinidia chinensis Actinidia08144 Lachesis_group15 + View
Actinidia chinensis Actinidia33088 Lachesis_group13 + View
Actinidia chinensis Actinidia37412 Lachesis_group16 - View
Actinidia chinensis Actinidia19341 Lachesis_group1 - View
Actinidia chinensis Actinidia15072 Lachesis_group12 + View
Amaranthus hybridus Ah.11g051420 AmaHy_arrow1_Scaffold_11 - View
Amaranthus hybridus Ah.02g110640 AmaHy_arrow1_Scaffold_2 + View
Aquilegia oxysepala Aqoxy3G02834 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ML7EMN PTHR31589//PTHR31589:SF19 - FAMILY NOT NAMED // CARBOXYL-TERMINAL PEPTIDASE-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ZQ702J PTHR31589//PTHR31589:SF19 - FAMILY NOT NAMED // CARBOXYL-TERMINAL PEPTIDASE-RELATED arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.440Q3C PF03080 - Domain of unknown function (DUF239) (DUF239) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5I5S0F PF03080 - Domain of unknown function (DUF239) (DUF239) arahy.Tifrunner.gnm1.Arahy.11 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.75VXC9 PF03080 - Domain of unknown function (DUF239) (DUF239) arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R9YPEF PF03080 - Domain of unknown function (DUF239) (DUF239) arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.778CML PF03080 - Domain of unknown function (DUF239) (DUF239) arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.V9DPYW PF03080 - Domain of unknown function (DUF239) (DUF239) arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT3G48230 carboxyl-terminal peptidase (DUF239) Protein of Unknown Function (DUF239)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239%2C plant (InterPro:IPR004314)%3B BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT5G18460.1)%3B Has 744 Blast hits to 694 proteins in 28 species: Archae - 0%3B Bacteria - 15%3B Metazoa - 0%3B Fungi - 10%3B Plants - 719%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT1G23340 carboxyl-terminal proteinase, putative (DUF239) Protein of Unknown Function (DUF239)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239%2C plant (InterPro:IPR004314)%3B BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G70550.1)%3B Has 778 Blast hits to 728 proteins in 29 species: Archae - 0%3B Bacteria - 13%3B Metazoa - 0%3B Fungi - 10%3B Plants - 755%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr1 - View
Beta vulgaris EL10Ac5g10702 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Chr5_EL10_PGA_scaffold2 - View
Camellia sinensis var. sinensis CSS0029773 PREDICTED: uncharacterized protein LOC105157258 [Sesamum indicum] Chr2 + View
Cannabis sativa CANSAT01G2499 NC_044373.1 + View
Cicer arietinum L. Ca_21943_v3 Ca_LG7_v3 + View
Corylus avellana Haze_12227 Protein of unknown function 9 + View
Corylus avellana Haze_07549 Protein of unknown function 4 + View
Coffea canephora Cc04_g12440 Protein of Unknown Function (DUF239) chr4 + View
Coffea canephora Cc11_g15510 Protein of Unknown Function (DUF239) chr11 + View
Citrus clementina Ciclev10031809m.g scaffold_4 - View
Citrus clementina Ciclev10020109m.g scaffold_3 + View
Ceratophyllum demersum CDE06G2392 4 - View
Ceratophyllum demersum CDE07G0116 5 - View
Ceratophyllum demersum CDE04G1423 2 + View
Carpinus fangiana Cfa019172 Cfa08 + View
Carpinus fangiana Cfa009193 Cfa03 + View
Cardamine hirsuta CARHR063760 Protein of Unknown Function (DUF239) Chr2 + View
Carya illinoinensis CiPaw.12G028800 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Chr12 + View
Carya illinoinensis CiPaw.11G023100 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Chr11 - View
Carya illinoinensis CiPaw.05G184600 PTHR31589//PTHR31589:SF19 - FAMILY NOT NAMED // CARBOXYL-TERMINAL PEPTIDASE-RELATED Chr05 - View
Carya illinoinensis CiPaw.06G069200 PTHR31589//PTHR31589:SF19 - FAMILY NOT NAMED // CARBOXYL-TERMINAL PEPTIDASE-RELATED Chr06 - View
Citrullus lanatus ClCG06G017150 Carboxyl-terminal proteinase CG_Chr06 + View
Citrullus lanatus ClCG01G013330 Carboxyl-terminal proteinase CG_Chr01 + View
Citrullus lanatus ClCG08G017780 Carboxyl-terminal proteinase CG_Chr08 - View
Citrullus lanatus ClCG05G025600 Carboxyl-terminal proteinase-like protein CG_Chr05 + View
Cucumis melo MELO3C010683.2 Carboxyl-terminal peptidase, putative (DUF239) chr03 - View
Cucumis melo MELO3C026281.2 Carboxyl-terminal peptidase, putative (DUF239) chr02 + View
Cucumis melo MELO3C002285.2 Carboxyl-terminal peptidase, putative (DUF239) chr12 - View
Cucumis melo MELO3C011970.2 Carboxyl-terminal peptidase, putative (DUF239) chr10 + View
Carica papaya Cpa.g.sc69.92 supercontig_69 + View
Chenopodium quinoa AUR62028759 Protein of unknown function C_Quinoa_Scaffold_1703 - View
Chenopodium quinoa AUR62024304 Protein of unknown function C_Quinoa_Scaffold_4119 - View
Chenopodium quinoa AUR62005433 Protein of unknown function C_Quinoa_Scaffold_1214 + View
Chenopodium quinoa AUR62008178 Protein of unknown function C_Quinoa_Scaffold_3422 - View
Capsella rubella Carub.0005s1439 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) scaffold_5 + View
Cucumis sativus L. CsaV3_1G001330 Protein of Unknown Function (DUF239) chr1 - View
Cucumis sativus L. CsaV3_2G024850 Protein of Unknown Function (DUF239) chr2 + View
Cucumis sativus L. CsaV3_1G008700 Protein of Unknown Function (DUF239) chr1 + View
Daucus carota DCAR_031131 hypothetical protein DCARv2_Chr9 + View
Daucus carota DCAR_021574 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv20625 GWHABJS00000006 + View
Davidia involucrata Dinv38559 GWHABJS00000019 + View
Davidia involucrata Dinv24811 GWHABJS00000018 - View
Davidia involucrata Dinv15252 GWHABJS00000008 + View
Durio zibethinus Duzib068G0427 NW_019167838.1 - View
Durio zibethinus Duzib268G1780 NW_019168270.1 + View
Durio zibethinus Duzib205G1774 NW_019168381.1 + View
Durio zibethinus Duzib251G0014 NW_019167971.1 + View
Erigeron canadensis ECA247G1505 Conyza_canadensis_scaffold:7 - View
Erigeron canadensis ECA232G4666 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.K02818 Chr11 - View
Eucalyptus grandis Eucgr.B00244 Chr02 - View
Eucalyptus grandis Eucgr.B03303 Chr02 + View
Erythranthe guttata Migut.L01477 scaffold_12 + View
Erythranthe guttata Migut.O00129 scaffold_17 + View
Erythranthe guttata Migut.E00189 scaffold_5 + View
Eutrema salsugineum Thhalv10018508m.g PTHR31589:SF19 - CARBOXYL-TERMINAL PEPTIDASE-RELATED scaffold_9 - View
Fragaria x ananassa FAN13G2889 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Fvb5-2 + View
Fragaria x ananassa FAN18G4365 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Fvb5-1 + View
Fragaria x ananassa FAN04G0424 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Fvb5-4 + View
Fragaria x ananassa FAN08G0769 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Fvb5-3 - View
Fragaria vesca FvH4_5g05740 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Fvb5 + View
Gossypium hirsutum Gohir.D02G160200 PTHR31589//PTHR31589:SF19 - FAMILY NOT NAMED // CARBOXYL-TERMINAL PEPTIDASE-RELATED D02 - View
Gossypium hirsutum Gohir.D12G273400 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) D12 + View
Gossypium hirsutum Gohir.A03G137000 PTHR31589//PTHR31589:SF19 - FAMILY NOT NAMED // CARBOXYL-TERMINAL PEPTIDASE-RELATED A03 - View
Gossypium hirsutum Gohir.A12G272700 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) A12 + View
Glycine max Glyma.02G037400 PTHR31589//PTHR31589:SF19 - FAMILY NOT NAMED // CARBOXYL-TERMINAL PEPTIDASE-RELATED Gm02 + View
Glycine max Glyma.17G087100 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Gm17 - View
Glycine max Glyma.05G039800 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Gm05 + View
Glycine max Glyma.01G027800 PTHR31589//PTHR31589:SF19 - FAMILY NOT NAMED // CARBOXYL-TERMINAL PEPTIDASE-RELATED Gm01 - View
Glycine max Glyma.04G185800 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Gm04 + View
Glycine max Glyma.06G180300 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Gm06 - View
Gossypium raimondii Gorai.005G180300 Chr05 - View
Gossypium raimondii Gorai.008G293800 Chr08 + View
Helianthus annuus HanXRQChr16g0504581 Putative domain of unknown function DUF4409 HanXRQChr16 + View
Lupinus albus Lalb_Chr05g0216641 PTHR31589:SF19 - CARBOXYL-TERMINAL PEPTIDASE-RELATED Lalb_Chr05 - View
Lupinus albus Lalb_Chr07g0182841 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Lalb_Chr07 + View
Lupinus albus Lalb_Chr12g0201731 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Lalb_Chr12 + View
Lotus japonicus Lj2g0009944 PTHR31589:SF19 - CARBOXYL-TERMINAL PEPTIDASE-RELATED chr2 - View
Lotus japonicus Lj4g0027349 PF14365 - Domain of unknown function (DUF4409) (DUF4409) chr4 + View
Lonicera japonica Lj9C445T14 GWHAAZE00000009 - View
Lonicera japonica Lj5A127G52 GWHAAZE00000005 + View
Lonicera japonica Lj3A1056T28 GWHAAZE00000003 + View
Lactuca sativa Lsat_1_v5_gn_4_5001 Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_4_75880 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Lsat_1_v8_lg_4 + View
Lactuca sativa Lsat_1_v5_gn_1_28121 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Lsat_1_v8_lg_1 + View
Malus domestica MD16G1097900 Protein of Unknown Function (DUF239) Chr16 + View
Malus domestica MD14G1176000 Protein of Unknown Function (DUF239) Chr14 - View
Malus domestica MD06G1170400 Protein of Unknown Function (DUF239) Chr06 - View
Manihot esculenta Manes.12G025000 Chromosome12 - View
Manihot esculenta Manes.13G026600 Chromosome13 - View
Manihot esculenta Manes.06G107700 Chromosome06 + View
Manihot esculenta Manes.14G063200 Chromosome14 - View
Medicago truncatula Medtr4g105400 carboxyl-terminal peptidase chr4 - View
Medicago truncatula Medtr3g077430 carboxyl-terminal peptidase chr3 - View
Nelumbo nucifera Nn4g22673 chr4 - View
Nelumbo nucifera Nn3g16764 chr3 - View
Nicotiana tabacum Nitab4.5_0001284g0020 Domain of unknown function DUF4409, Domain of unknown function DUF239 Nitab4.5_0001284 + View
Olea europaea Oeu040850.1 chr10 + View
Olea europaea Oeu036010.1 scaffold307 + View
Petunia axillaris Peaxi162Scf00089g01636 Protein of Unknown Function (DUF239) Peaxi162Scf00089 - View
Petunia axillaris Peaxi162Scf00689g00016 Protein of Unknown Function (DUF239) Peaxi162Scf00689 - View
Punica granatum PGR119G1037 NC_045132.1 + View
Punica granatum PGR083G0081 NC_045133.1 + View
Punica granatum PGR102G1520 NC_045129.1 - View
Punica granatum PGR044G1236 NC_045134.1 + View
Prunus persica Prupe.5G170000 PF03080 - Domain of unknown function (DUF239) (DUF239) Pp05 - View
Prunus persica Prupe.1G248600 PTHR31589:SF19 - CARBOXYL-TERMINAL PEPTIDASE-RELATED Pp01 - View
Pisum sativum Psat4g058680 Domain of unknown function (DUF239) chr4LG4 + View
Papaver somniferum PSO478G5032 NC_039361.1 + View
Populus trichocarpa Potri.012G088300 PF03080 - Domain of unknown function (DUF239) (DUF239) Chr12 - View
Populus trichocarpa Potri.010G044300 PF03080 - Domain of unknown function (DUF239) (DUF239) Chr10 + View
Populus trichocarpa Potri.015G080300 PF03080 - Domain of unknown function (DUF239) (DUF239) Chr15 + View
Phaseolus vulgaris Phvul.009G176000 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Chr09 - View
Phaseolus vulgaris Phvul.003G203000 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Chr03 + View
Quercus lobata QL10p008800 10 - View
Quercus lobata QL03p058661 3 - View
Rosa chinensis RcHm_v2.0_Chr7g0193071 RcHm_v2.0_Chr7 - View
Rosa chinensis RcHm_v2.0_Chr4g0433271 RcHm_v2.0_Chr4 + View
Rhododendron simsii Rhsim12G0112800 chr12 - View
Striga asiatica SGA_v2.0_scaffold90G27878 scaffold90 - View
Salvia bowleyana SalBow5G3947 GWHASIU00000003 + View
Salvia bowleyana SalBow2G0028 GWHASIU00000007 + View
Salvia bowleyana SalBow5G1002 GWHASIU00000003 - View
Salix brachista Sabra15G0104500 GWHAAZH00000015 + View
Salix brachista Sabra12G0063100 GWHAAZH00000012 - View
Salix brachista Sabra10G0023800 GWHAAZH00000010 - View
Simmondsia chinensis Sc12g0005190 GWHAASQ00000012 - View
Simmondsia chinensis Sc04g0001680 GWHAASQ00000004 + View
Simmondsia chinensis Sc04g0009390 GWHAASQ00000004 + View
Sechium edule Sed0013417 LG03 - View
Sechium edule Sed0002811 LG12 + View
Sechium edule Sed0027000 LG08 + View
Sechium edule Sed0005113 LG01 - View
Sechium edule Sed0024665 LG08 - View
Sechium edule Sed0019366 LG04 - View
Sechium edule Sed0011796 LG06 + View
Solanum lycopersicum Solyc06g071590.3 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** F4I5H4_ARATH) SL4.0ch06 + View
Solanum lycopersicum Solyc03g112620.4 NEP-interacting protein, putative (DUF239) (AHRD V3.3 *** F4I5H4_ARATH) SL4.0ch03 - View
Schrenkiella parvula Sp5g25700 PTHR31589:SF19 - CARBOXYL-TERMINAL PEPTIDASE-RELATED ch5-6 + View
Solanum pennellii Sopen06g027880 Protein of Unknown Function (DUF239) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant | BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) Spenn-ch06 + View
Solanum pennellii Sopen03g031700 Protein of Unknown Function (DUF239) | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant | BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400018103 Carboxyl-terminal proteinase ST4.03ch03 - View
Solanum tuberosum PGSC0003DMG400027081 Carboxyl-terminal proteinase ST4.03ch06 + View
Selenicereus undatus Hund25380 Scaffold_3410 + View
Selenicereus undatus Hund02765 Scaffold_33678 + View
Trochodendron aralioides TAR374G0658 group12 + View
Trochodendron aralioides TAR371G0088 group13 + View
Trochodendron aralioides TAR622G0571 group8 + View
Trochodendron aralioides TAR629G1980 group0 - View
Theobroma cacao Thecc.03G019500 Uncharacterized protein Chromosome_3 + View
Theobroma cacao Thecc.02G256500 Uncharacterized protein Chromosome_2 + View
Trifolium pratense TPR.G37456 Tp57577_TGAC_v2_LG5 - View
Tripterygium wilfordii TWI36G1109 NC_052237.1 - View
Tripterygium wilfordii TWI14G0877 NC_052249.1 + View
Tripterygium wilfordii TWI39G0233 NC_052250.1 + View
Tripterygium wilfordii TWI18G0186 NC_052241.1 + View
Utricularia gibba unitig_750.g28461 unitig_750 - View
Vaccinium macrocarpon vmacro19415 Protein of unknown function chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G1857 CM024072.1 + View
Vigna mungo VMungo1215G0451 CM024074.1 - View
Vigna mungo VMungo1215G1887 CM024074.1 - View
Vitis vinifera GSVIVG01013810001 chr1 - View
Vitis vinifera GSVIVG01007693001 chr17 + View