Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
MSTRG.20622 ScioBoG_26180_HRSCAF_26306 - View
MSTRG.4992 ScioBoG_102838_HRSCAF_103081 + View
MSTRG.28110 ScioBoG_94932_HRSCAF_95134 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G25870 LG-1 + View
Actinidia chinensis Actinidia05833 Lachesis_group20 + View
Actinidia chinensis Actinidia31723 Lachesis_group0 + View
Arabidopsis lyrata AL7G36670 scaffold_7 + View
Arabidopsis lyrata AL4G43170 scaffold_4 + View
Arabidopsis thaliana AT4G17860 carboxyl-terminal proteinase-like protein, putative (DUF239) Protein of Unknown Function (DUF239)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 6 plant structures%3B EXPRESSED DURING: C globular stage%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239%2C plant (InterPro:IPR004314)%3B BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT5G46200.1)%3B Has 626 Blast hits to 604 proteins in 21 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 0%3B Fungi - 6%3B Plants - 616%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT2G44210 carboxyl-terminal peptidase (DUF239) Protein of Unknown Function (DUF239)%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239%2C plant (InterPro:IPR004314)%3B BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) (TAIR:AT1G55360.1)%3B Has 745 Blast hits to 697 proteins in 28 species: Archae - 0%3B Bacteria - 14%3B Metazoa - 0%3B Fungi - 10%3B Plants - 721%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB02g08805 ChrB02 + View
Brassica carinata BcaC02g12319 ChrC02 + View
Brassica carinata BcaB02g08197 ChrB02 + View
Brassica napus A04p01910 A04 + View
Brassica napus C04p32680 C04 + View
Brassica oleracea BolC4t28594H C4 + View
Brassica oleracea BolC4t22141H C4 + View
Brassica oleracea BolC3t15297H C3 + View
Brassica rapa BraA04t18784Z A04 + View
Brassica rapa BraA05t19415Z A05 + View
Brassica rapa BraA04t15915Z A04 + View
Corylus avellana Haze_08248 Protein of unknown function 4 + View
Coffea canephora Cc02_g26600 Protein of Unknown Function (DUF239) chr2 + View
Citrullus lanatus ClCG09G003600 Carboxyl-terminal proteinase-like protein CG_Chr09 + View
Citrullus lanatus ClCG10G001660 Carboxyl-terminal peptidase-like CG_Chr10 - View
Cucumis melo MELO3C023496.2 Carboxyl-terminal peptidase, putative (DUF239) chr01 - View
Capsella rubella Carub.0004s2679 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) scaffold_4 + View
Capsella rubella Carub.0007s2350 PTHR31589//PTHR31589:SF17 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MZA15-RELATED scaffold_7 + View
Cucumis sativus L. CsaV3_3G001780 Protein of Unknown Function (DUF239) chr3 + View
Cucumis sativus L. CsaV3_7G031580 Protein of Unknown Function (DUF239) chr7 - View
Daucus carota DCAR_024997 hypothetical protein DCARv2_Chr7 - View
Daucus carota DCAR_015726 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv43952 GWHABJS00000020 - View
Davidia involucrata Dinv43510 GWHABJS00000016 - View
Erigeron canadensis ECA248G2917 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA236G4815 Conyza_canadensis_scaffold:3 - View
Erythranthe guttata Migut.B01414 scaffold_2 - View
Eutrema salsugineum Thhalv10027151m.g PTHR31589:SF17 - GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MZA15-RELATED scaffold_1 + View
Eutrema salsugineum Thhalv10001464m.g PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) scaffold_22 + View
Lupinus albus Lalb_Chr20g0108261 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) Lalb_Chr20 - View
Lupinus albus Lalb_Chr25g0283941 PF03080 - Domain of unknown function (DUF239) (DUF239) Lalb_Chr25 - View
Lotus japonicus Lj3g0025493 PF14365 - Domain of unknown function (DUF4409) (DUF4409) chr3 + View
Lonicera japonica Lj9A618T83 GWHAAZE00000009 + View
Lonicera japonica Lj7A561T32 GWHAAZE00000007 + View
Lactuca sativa Lsat_1_v5_gn_7_34001 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Lsat_1_v8_lg_7 + View
Manihot esculenta Manes.10G153700 Chromosome10 - View
Medicago truncatula Medtr2g062610 carboxyl-terminal peptidase chr2 - View
Nicotiana tabacum Nitab4.5_0000468g0270 Domain of unknown function DUF4409, Domain of unknown function DUF239 Nitab4.5_0000468 - View
Populus trichocarpa Potri.001G233000 PF03080 - Domain of unknown function (DUF239) (DUF239) Chr01 - View
Phaseolus vulgaris Phvul.005G045000 PF14365 - Domain of unknown function (DUF4409) (DUF4409) Chr05 + View
Rhododendron simsii Rhsim07G0048600 chr07 + View
Salvia bowleyana SalBow5G4098 GWHASIU00000003 - View
Salix brachista Sabra16G0139400 GWHAAZH00000016 - View
Sechium edule Sed0005918 LG07 - View
Sechium edule Sed0003143 LG09 + View
Solanum lycopersicum Solyc01g081570.3 DUF239 domain-containing protein/DUF4409 domain-containing protein (AHRD V3.3 *** A0A1Q3BKR6_CEPFO) SL4.0ch01 + View
Schrenkiella parvula Sp4g26290 PF03080//PF14365 - Domain of unknown function (DUF239) (DUF239) // Domain of unknown function (DUF4409) (DUF4409) ch4-6 + View
Solanum pennellii Sopen01g033120 Protein of Unknown Function (DUF239) | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF239, plant | BEST Arabidopsis thaliana protein match is: Protein of Unknown Function (DUF239) Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400031115 Conserved gene of unknown function ST4.03ch01 - View
Selenicereus undatus Hund21626 Scaffold_33680 + View
Trochodendron aralioides TAR623G1117 group7 + View
Tarenaya hassleriana THA.LOC104806703 uncharacterized protein LOC104806703 NW_010962392.1 - View
Tripterygium wilfordii TWI09G1105 NC_052245.1 + View
Tripterygium wilfordii TWI34G1713 NC_052235.1 - View
Tripterygium wilfordii TWI73G0740 NC_052232.1 + View
Utricularia gibba unitig_26.g8844 unitig_26 - View
Utricularia gibba unitig_750.g28416 unitig_750 + View
Vigna mungo VMungo1080G1339 CM024079.1 + View