Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G680 LG-6 - View
Aethionema arabicum Aa31LG9G6220 LG-9 - View
Aethionema arabicum Aa31LG9G15430 LG-9 - View
Acer truncatum Atru.chr6.1654 chr6 + View
Arabidopsis lyrata AL8G11690 scaffold_8 - View
Arabidopsis lyrata AL7G36580 scaffold_7 + View
Avicennia marina MSTRG.1989 ScioBoG_102834_HRSCAF_103055 - View
Aquilegia oxysepala Aqoxy3G02289 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.APQR8A PF13639 - Ring finger domain (zf-RING_2) arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.GHXX5X PF13639 - Ring finger domain (zf-RING_2) arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT5G46650 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G17920.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT2G35420 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G17920.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT4G17920 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G46650.1)%3B Has 8779 Blast hits to 8757 proteins in 280 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2402%3B Fungi - 735%3B Plants - 4417%3B Viruses - 37%3B Other Eukaryotes - 1188 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaC02g07714 ChrC02 + View
Brassica carinata BcaNung00043 Contig74 + View
Brassica carinata BcaC06g34363 ChrC06 - View
Brassica carinata BcaB02g09432 ChrB02 + View
Brassica carinata BcaC04g21692 ChrC04 - View
Brassica carinata BcaC09g51584 ChrC09 + View
Brassica carinata BcaC06g31459 ChrC06 - View
Brassica napus C06p35050 C06 + View
Brassica napus A06p45780 A06 - View
Brassica napus A03p50870 A03 - View
Brassica napus C07p49260 C07 - View
Brassica napus C04p12760 C04 + View
Brassica napus C01p11770 C01 - View
Brassica napus C07p29900 C07 + View
Brassica napus C09p28770 C09 + View
Brassica napus A01p09970 A01 - View
Brassica napus A04p26910 A04 - View
Brassica oleracea BolC4t27917H C4 - View
Brassica oleracea BolC9t55737H C9 + View
Brassica oleracea BolC7t45435H C7 - View
Brassica oleracea BolC7t43537H C7 + View
Brassica oleracea BolC1t01139H C1 - View
Brassica rapa BraA01t00941Z A01 - View
Brassica rapa BraA06t27447Z A06 - View
Brassica rapa BraA09t37849Z A09 + View
Beta vulgaris EL10Ac5g12085 PF13639 - Ring finger domain (zf-RING_2) Chr5_EL10_PGA_scaffold2 + View
Cannabis sativa CANSAT21G2412 NC_044374.1 - View
Corylus avellana Haze_08209 Similar to ATL29: RING-H2 finger protein ATL29 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc08_g02970 Putative RING-H2 finger protein ATL29 chr8 - View
Carpinus fangiana Cfa012458 Cfa05 - View
Cardamine hirsuta CARHR174850 RING finger-like protein Chr6 - View
Cardamine hirsuta CARHR129580 RING finger-like protein Chr4 - View
Cardamine hirsuta CARHR224660 RING finger-like protein Chr7 - View
Carya illinoinensis CiPaw.11G095300 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) Chr11 - View
Carya illinoinensis CiPaw.12G065000 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) Chr12 - View
Cucumis melo MELO3C003422.2 RING-H2 finger protein ATL29-like chr04 - View
Corchorus olitorius COL.COLO4_17001 Zinc finger%2C RING-type AWUE01016274.1 + View
Capsella rubella Carub.0007s2341 PTHR14155 - RING FINGER DOMAIN-CONTAINING scaffold_7 + View
Capsella rubella Carub.0004s1710 KOG1493 - Anaphase-promoting complex (APC), subunit 11 scaffold_4 - View
Capsella rubella Carub.0008s0126 PTHR14155 - RING FINGER DOMAIN-CONTAINING scaffold_8 - View
Cucumis sativus L. CsaV3_3G049040 RING-H2 finger protein ATL29 chr3 + View
Davidia involucrata Dinv28970 GWHABJS00000003 - View
Durio zibethinus Duzib084G1131 NW_019167827.1 + View
Durio zibethinus Duzib068G0996 NW_019167838.1 + View
Eucalyptus grandis Eucgr.D02209 Chr04 - View
Eutrema salsugineum Thhalv10017563m.g PTHR14155 - RING FINGER DOMAIN-CONTAINING scaffold_10 - View
Eutrema salsugineum Thhalv10025826m.g PTHR14155 - RING FINGER DOMAIN-CONTAINING scaffold_1 + View
Eutrema salsugineum Thhalv10009642m.g KOG1493//KOG4172 - Anaphase-promoting complex (APC), subunit 11 // Predicted E3 ubiquitin ligase scaffold_5 - View
Eutrema salsugineum Thhalv10001206m.g PTHR14155 - RING FINGER DOMAIN-CONTAINING scaffold_20 + View
Fragaria x ananassa FAN18G1640 PTHR14155//PTHR14155:SF2 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL60 Fvb5-1 - View
Fragaria x ananassa FAN04G2730 PF13639 - Ring finger domain (zf-RING_2) Fvb5-4 - View
Fragaria x ananassa FAN13G0585 PF13639 - Ring finger domain (zf-RING_2) Fvb5-2 + View
Fragaria x ananassa FAN18G3493 PTHR14155:SF2 - RING-H2 FINGER PROTEIN ATL60 Fvb5-1 + View
Fragaria x ananassa FAN08G3347 PF13639 - Ring finger domain (zf-RING_2) Fvb5-3 + View
Fragaria vesca FvH4_5g22380 PTHR14155//PTHR14155:SF2 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL60 Fvb5 - View
Gossypium hirsutum Gohir.D09G193801 D09 - View
Gossypium hirsutum Gohir.A11G031200 PF13639 - Ring finger domain (zf-RING_2) A11 - View
Gossypium hirsutum Gohir.A09G199500 PF13639 - Ring finger domain (zf-RING_2) A09 - View
Gossypium hirsutum Gohir.D12G210100 PF13639 - Ring finger domain (zf-RING_2) D12 + View
Gossypium hirsutum Gohir.D11G029900 PF13639 - Ring finger domain (zf-RING_2) D11 - View
Gossypium hirsutum Gohir.A08G155750 PF00642//PF13639 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ring finger domain (zf-RING_2) A08 + View
Gossypium hirsutum Gohir.D08G176350 PF13639 - Ring finger domain (zf-RING_2) D08 + View
Gossypium hirsutum Gohir.A12G207700 PF13639 - Ring finger domain (zf-RING_2) A12 + View
Glycine max Glyma.08G270800 PTHR14155 - RING FINGER DOMAIN-CONTAINING Gm08 + View
Gossypium raimondii Gorai.008G225700 Chr08 + View
Gossypium raimondii Gorai.006G217300 Chr06 - View
Gossypium raimondii Gorai.004G184200 Chr04 + View
Gossypium raimondii Gorai.007G032700 Chr07 - View
Helianthus annuus HanXRQChr06g0167631 Probable RING/U-box superfamily protein HanXRQChr06 - View
Hydrangea macrophylla Hma1.2p1_0574F.1_g181550 Hma1.2p1_0574F.1 - View
Lupinus albus Lalb_Chr05g0215941 PF13639 - Ring finger domain (zf-RING_2) Lalb_Chr05 + View
Lupinus albus Lalb_Chr16g0381281 PF13639 - Ring finger domain (zf-RING_2) Lalb_Chr16 + View
Lotus japonicus Lj4g0025089 PF13639 - Ring finger domain (zf-RING_2) chr4 - View
Lotus japonicus Lj2g0009585 PF13639 - Ring finger domain (zf-RING_2) chr2 + View
Lonicera japonica Lj2P236T40 GWHAAZE00000002 + View
Lonicera japonica Lj8P304T36 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_6_4060 PTHR14155 - RING FINGER DOMAIN-CONTAINING Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_3_18761 PTHR14155 - RING FINGER DOMAIN-CONTAINING Lsat_1_v8_lg_3 - View
Magnolia biondii MBI04_g33886_MAGBIO AED:0.38 Chr04 - View
Medicago truncatula Medtr8g066740 zinc finger, C3HC4 type (RING finger) protein chr8 + View
Nelumbo nucifera Nn1g00135 chr1 - View
Nelumbo nucifera Nn6g33562 chr6 + View
Olea europaea Oeu006243.1 chr8 + View
Oryza sativa ssp. japonica Os10g0574400 Zinc finger, RING-type domain containing protein. chr10 + View
Petunia axillaris Peaxi162Scf00236g00042 RING/U-box superfamily protein Peaxi162Scf00236 - View
Petunia axillaris Peaxi162Scf00045g00110 NAD(P)-binding Rossmann-fold superfamily protein Peaxi162Scf00045 - View
Punica granatum PGR031G0838 NC_045127.1 + View
Prunus persica Prupe.5G033100 K10664 - E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:6.3.2.19] (ATL6S) Pp05 + View
Pisum sativum Psat2g173120 Ring finger domain chr2LG1 + View
Populus trichocarpa Potri.001G140900 PF13639 - Ring finger domain (zf-RING_2) Chr01 + View
Populus trichocarpa Potri.003G093500 PF13639 - Ring finger domain (zf-RING_2) Chr03 - View
Phaseolus vulgaris Phvul.003G284300 PTHR14155 - RING FINGER DOMAIN-CONTAINING Chr03 + View
Phaseolus vulgaris Phvul.002G140200 K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) Chr02 + View
Quercus lobata QL12p004841 12 + View
Rosa chinensis RcHm_v2.0_Chr7g0210121 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim11G0016900 chr11 - View
Striga asiatica SGA_v2.0_scaffold6G03146 scaffold6 - View
Simmondsia chinensis Sc22g0001620 GWHAASQ00000022 + View
Sechium edule Sed0020036 LG01 - View
Sechium edule Sed0020307 LG05 - View
Sapria himalayana SHI07307 scaffold4_21100006 - View
Solanum lycopersicum Solyc08g076800.4 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QDA6_ARTAN) SL4.0ch08 + View
Solanum lycopersicum Solyc08g005110.1 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1N0W0_ARTAN) SL4.0ch08 - View
Schrenkiella parvula Sp4g17640 PF13639 - Ring finger domain (zf-RING_2) ch4-6 - View
Schrenkiella parvula Sp1g28520 KOG1493//KOG4172 - Anaphase-promoting complex (APC), subunit 11 // Predicted E3 ubiquitin ligase ch1-1 - View
Schrenkiella parvula Sp7g16180 PF13639 - Ring finger domain (zf-RING_2) ch7-4 + View
Schrenkiella parvula Sp2g11480 PF13639 - Ring finger domain (zf-RING_2) ch2-4 + View
Solanum pennellii Sopen08g025320 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch08 + View
Theobroma cacao Thecc.03G225200 RING/U-box superfamily protein Chromosome_3 + View
Tarenaya hassleriana THA.LOC104827752 RING-H2 finger protein ATL29 NW_010967966.1 + View
Tripterygium wilfordii TWI81G0765 NC_052251.1 - View
Vaccinium macrocarpon vmacro00316 Similar to ATL29: RING-H2 finger protein ATL29 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G1136 CM024069.1 + View
Zea mays Zm00001eb024440 Zm00001e002430 E3 ubiquitin-protein ligase ATL6 1 - View