Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Acer truncatum | Atru.chr11.1610 | chr11 | + | View | |
| Arabidopsis lyrata | AL2G28300 | scaffold_2 | - | View | |
| Avicennia marina | MSTRG.764 | ScioBoG_102831_HRSCAF_103044 | + | View | |
| Aquilegia oxysepala | Aqoxy3G00518 | CHR03 | - | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.6NGM5D | PF02576 - Putative ribosome maturation factor RimP (DUF150) | arahy.Tifrunner.gnm1.Arahy.05 | + | View |
| Arabidopsis thaliana | AT1G69210 | Uncharacterized protein family UPF0090 Uncharacterised protein family UPF0090%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0090 (InterPro:IPR003728)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family UPF0090 (TAIR:AT1G77122.1)%3B Has 169 Blast hits to 169 proteins in 64 species: Archae - 0%3B Bacteria - 102%3B Metazoa - 0%3B Fungi - 0%3B Plants - 61%3B Viruses - 0%3B Other Eukaryotes - 6 (source: NCBI BLink). Uncharacterised protein family UPF0090%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0090 (InterPro:IPR003728)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family UPF0090 (TAIR:AT1G77122.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). | Chr1 | - | View |
| Brassica carinata | BcaC03g15062 | ChrC03 | - | View | |
| Brassica napus | A02p15710 | A02 | - | View | |
| Brassica napus | C02p26150 | C02 | - | View | |
| Brassica napus | C06p40700 | C06 | + | View | |
| Brassica oleracea | BolC6t39362H | C6 | - | View | |
| Brassica oleracea | BolC2t08682H | C2 | - | View | |
| Brassica rapa | BraA02t06632Z | A02 | - | View | |
| Beta vulgaris | EL10Ac6g15015 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Chr6_EL10_PGA_scaffold0 | + | View |
| Capsicum annuum | CAN.G707.18 | PGAv.1.6.scaffold707 | + | View | |
| Cannabis sativa | CANSAT64G0265 | NC_044379.1 | - | View | |
| Cicer arietinum L. | Ca_04997_v3 | Ca_LG2_v3 | + | View | |
| Corylus avellana | Haze_11889 | Protein of unknown function | 9 | - | View |
| Coffea canephora | Cc11_g11840 | Uncharacterised protein family UPF0090 | chr11 | - | View |
| Cardamine hirsuta | CARHR062090 | Ribosome maturation factor rimP | Chr2 | - | View |
| Carya illinoinensis | CiPaw.06G093000 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Chr06 | + | View |
| Citrullus lanatus | ClCG05G023640 | Ribosome maturation factor rimP | CG_Chr05 | - | View |
| Cucumis melo | MELO3C012158.2 | Ribosome maturation factor rimP | chr10 | - | View |
| Chenopodium quinoa | AUR62007902 | rimP: Ribosome maturation factor RimP | C_Quinoa_Scaffold_2646 | - | View |
| Chenopodium quinoa | AUR62003085 | rimP: Ribosome maturation factor RimP | C_Quinoa_Scaffold_1000 | - | View |
| Capsella rubella | Carub.0002s1580 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | scaffold_2 | - | View |
| Cucumis sativus L. | CsaV3_5G033380 | Ribosome maturation factor rimp | chr5 | + | View |
| Daucus carota | DCAR_026681 | hypothetical protein | DCARv2_Chr8 | - | View |
| Davidia involucrata | Dinv34057 | GWHABJS00000008 | - | View | |
| Durio zibethinus | Duzib248G1180 | NW_019168048.1 | + | View | |
| Durio zibethinus | Duzib251G0111 | NW_019167971.1 | - | View | |
| Erigeron canadensis | ECA246G4739 | Conyza_canadensis_scaffold:8 | - | View | |
| Eucalyptus grandis | Eucgr.G02432 | Chr07 | - | View | |
| Erythranthe guttata | Migut.L01177 | scaffold_12 | - | View | |
| Eutrema salsugineum | Thhalv10018935m.g | PF02576 - Putative ribosome maturation factor RimP (DUF150) | scaffold_9 | + | View |
| Fragaria x ananassa | FAN12G0902 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Fvb4-3 | + | View |
| Fragaria x ananassa | FAN07G2400 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Fvb4-4 | + | View |
| Fragaria x ananassa | FAN17G0356 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Fvb4-2 | + | View |
| Fragaria x ananassa | FAN22G1368 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Fvb4-1 | - | View |
| Fragaria vesca | FvH4_4g29740 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Fvb4 | - | View |
| Gossypium hirsutum | Gohir.A13G083700 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | A13 | - | View |
| Glycine max | Glyma.02G120100 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Gm02 | + | View |
| Glycine max | Glyma.01G061900 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Gm01 | + | View |
| Gossypium raimondii | Gorai.013G095100 | Chr13 | + | View | |
| Helianthus annuus | HanXRQChr12g0375131 | Putative ribosome maturation factor RimP | HanXRQChr12 | - | View |
| Helianthus annuus | HanXRQChr15g0477141 | Putative ribosome maturation factor RimP | HanXRQChr15 | + | View |
| Lupinus albus | Lalb_Chr10g0098921 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Lalb_Chr10 | + | View |
| Lonicera japonica | Lj3A1029T44 | GWHAAZE00000003 | - | View | |
| Lactuca sativa | Lsat_1_v5_gn_3_53741 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Lsat_1_v8_lg_3 | + | View |
| Malus domestica | MD13G1060300 | Uncharacterised protein family UPF0090 | Chr13 | - | View |
| Manihot esculenta | Manes.01G026850 | Chromosome01 | - | View | |
| Medicago truncatula | Medtr5g045020 | DUF150 family protein | chr5 | - | View |
| Nelumbo nucifera | Nn4g23474 | chr4 | + | View | |
| Nicotiana tabacum | Nitab4.5_0000231g0070 | Ribosome maturation factor RimP | Nitab4.5_0000231 | - | View |
| Nicotiana tabacum | Nitab4.5_0007734g0070 | Ribosome maturation factor RimP | Nitab4.5_0007734 | - | View |
| Petunia axillaris | Peaxi162Scf00175g00420 | Uncharacterised protein family UPF0090 | Peaxi162Scf00175 | + | View |
| Prunus persica | Prupe.1G289100 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Pp01 | + | View |
| Pisum sativum | Psat2g131600 | Putative ribosome maturation factor RimP | chr2LG1 | + | View |
| Papaver somniferum | PSO017G5009 | NC_039362.1 | + | View | |
| Papaver somniferum | PSO478G3185 | NC_039361.1 | - | View | |
| Populus trichocarpa | Potri.010G157300 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Chr10 | - | View |
| Phaseolus vulgaris | Phvul.003G040900 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Chr03 | - | View |
| Quercus lobata | QL03p073804 | 3 | - | View | |
| Rosa chinensis | RcHm_v2.0_Chr4g0438001 | RcHm_v2.0_Chr4 | - | View | |
| Rhododendron simsii | Rhsim09G0126200 | chr09 | - | View | |
| Striga asiatica | SGA_v2.0_scaffold16G07804 | scaffold16 | + | View | |
| Salvia bowleyana | SalBow2G3033 | GWHASIU00000007 | + | View | |
| Salix brachista | Sabra10G0119400 | GWHAAZH00000010 | - | View | |
| Simmondsia chinensis | Sc04g0007500 | GWHAASQ00000004 | - | View | |
| Sechium edule | Sed0001803 | LG06 | + | View | |
| Solanum lycopersicum | Solyc05g012120.3 | Ribosome maturation factor RimP (AHRD V3.3 *** A0A2U1QL18_ARTAN) | SL4.0ch05 | - | View |
| Solanum pennellii | Sopen05g006910 | Uncharacterised protein family UPF0090 | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 12 growth stages | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0090 | BEST Arabidopsis thaliana protein match is: Uncharacterised protein family UPF0090 | Spenn-ch05 | - | View |
| Solanum tuberosum | PGSC0003DMG400028364 | Conserved gene of unknown function | ST4.03ch05 | + | View |
| Selenicereus undatus | Hund05831 | Scaffold_19641 | - | View | |
| Trochodendron aralioides | TAR629G1435 | group0 | - | View | |
| Theobroma cacao | Thecc.02G328200 | F4N2.17 | Chromosome_2 | - | View |
| Tarenaya hassleriana | THA.LOC104822006 | uncharacterized protein LOC104822006 isoform X1 | NW_010966617.1 | - | View |
| Trifolium pratense | TPR.G23766 | Tp57577_TGAC_v2_LG3 | + | View | |
| Tripterygium wilfordii | TWI79G0802 | NC_052238.1 | + | View | |
| Vaccinium macrocarpon | vmacro10435 | Similar to rimP: Ribosome maturation factor RimP (Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) OX%3D189518) | chr8_Vaccinium_macrocarpon_Stevens_v1 | + | View |
| Vaccinium macrocarpon | vmacro20925 | Protein of unknown function | chr10_Vaccinium_macrocarpon_Stevens_v1 | + | View |
| Vigna mungo | VMungo1215G0965 | CM024074.1 | + | View | |
| Vitis vinifera | GSVIVG01012234001 | chr1 | - | View |