Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Lalb_Chr07g0180631 K18469 - TBC1 domain family member 5 (TBC1D5) Lalb_Chr07 + View
Lalb_Chr08g0231781 PTHR22957//PTHR22957:SF274 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr08 + View
Lalb_Chr12g0199591 K18469 - TBC1 domain family member 5 (TBC1D5) Lalb_Chr12 + View
Lalb_Chr23g0276801 K18469 - TBC1 domain family member 5 (TBC1D5) Lalb_Chr23 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G13110 LG-3 - View
Aethionema arabicum Aa31LG2G20600 LG-2 - View
Arabidopsis lyrata AL7G22290 scaffold_7 - View
Arabidopsis lyrata AL8G33180 scaffold_8 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DF4URC PTHR22957//PTHR22957:SF28 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // TBC1 DOMAIN FAMILY MEMBER 5 arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.06L84B K18469 - TBC1 domain family member 5 (TBC1D5) arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LHRZ75 K18469 - TBC1 domain family member 5 (TBC1D5) arahy.Tifrunner.gnm1.Arahy.14 + View
Arabidopsis thaliana AT5G57210 Ypt/Rab-GAP domain of gyp1p superfamily protein Ypt/Rab-GAP domain of gyp1p superfamily protein%3B FUNCTIONS IN: RAB GTPase activator activity%3B INVOLVED IN: regulation of Rab GTPase activity%3B LOCATED IN: intracellular%2C chloroplast%3B CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195)%3B BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT4G29950.1)%3B Has 1722 Blast hits to 1340 proteins in 214 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 717%3B Fungi - 361%3B Plants - 287%3B Viruses - 0%3B Other Eukaryotes - 353 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT4G29950 Ypt/Rab-GAP domain of gyp1p superfamily protein Ypt/Rab-GAP domain of gyp1p superfamily protein%3B FUNCTIONS IN: RAB GTPase activator activity%3B INVOLVED IN: regulation of Rab GTPase activity%3B LOCATED IN: intracellular%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195)%3B BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G19240.1)%3B Has 1856 Blast hits to 1473 proteins in 235 species: Archae - 2%3B Bacteria - 59%3B Metazoa - 791%3B Fungi - 326%3B Plants - 250%3B Viruses - 6%3B Other Eukaryotes - 422 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC04g19989 ChrC04 + View
Brassica napus A01p08150 A01 - View
Brassica napus A10p14610 A10 - View
Brassica oleracea BolC9t57755H C9 - View
Brassica rapa BraA10t43547Z A10 - View
Camellia sinensis var. sinensis CSS0022445 hypothetical protein PRUPE_ppa001442mg [Prunus persica] Chr2 + View
Cicer arietinum L. Ca_21252_v3 Ca_LG7_v3 + View
Cicer arietinum L. Ca_02099_v3 Ca_LG1_v3 - View
Corylus avellana Haze_22014 Protein of unknown function 3 + View
Citrus clementina Ciclev10007458m.g scaffold_1 - View
Carpinus fangiana Cfa013447 Cfa05 + View
Cardamine hirsuta CARHR271000 TBC1 domain family member-like protein Chr8 - View
Cardamine hirsuta CARHR237870 TBC1 domain family member-like protein Chr7 + View
Carya illinoinensis CiPaw.08G033000 PTHR22957//PTHR22957:SF274 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Chr08 - View
Citrullus lanatus ClCG11G011790 TBC1 domain family member CG_Chr11 + View
Capsella rubella Carub.0008s1772 K18469 - TBC1 domain family member 5 (TBC1D5) scaffold_8 - View
Capsella rubella Carub.0007s1069 K18469 - TBC1 domain family member 5 (TBC1D5) scaffold_7 - View
Davidia involucrata Dinv25436 GWHABJS00000001 - View
Davidia involucrata Dinv41170 GWHABJS00000013 + View
Durio zibethinus Duzib170G0992 NW_019167871.1 + View
Eucalyptus grandis Eucgr.C00121 Chr03 - View
Erythranthe guttata Migut.J00803 scaffold_10 - View
Erythranthe guttata Migut.L01886 scaffold_12 - View
Eutrema salsugineum Thhalv10024395m.g scaffold_1 - View
Eutrema salsugineum Thhalv10012758m.g K18469 - TBC1 domain family member 5 (TBC1D5) scaffold_2 + View
Fragaria x ananassa FAN07G0459 K18469 - TBC1 domain family member 5 (TBC1D5) Fvb4-4 + View
Glycine max Glyma.15G165500 K18469 - TBC1 domain family member 5 (TBC1D5) Gm15 + View
Glycine max Glyma.17G059700 K18469 - TBC1 domain family member 5 (TBC1D5) Gm17 - View
Glycine max Glyma.13G100200 K18469 - TBC1 domain family member 5 (TBC1D5) Gm13 + View
Glycine max Glyma.09G059200 K18469 - TBC1 domain family member 5 (TBC1D5) Gm09 + View
Lotus japonicus Lj4g0019846 K18469 - TBC1 domain family member 5 (TBC1D5) chr4 - View
Lotus japonicus Lj6g0011356 K18469 - TBC1 domain family member 5 (TBC1D5) chr6 - View
Lactuca sativa Lsat_1_v5_gn_7_56381 Lsat_1_v8_lg_7 - View
Magnolia biondii MBI13_g01740_MAGBIO AED:0.09 Chr13 + View
Malus domestica MD16G1249600 Ypt/Rab-GAP domain of gyp1p superfamily protein Chr16 - View
Malus domestica MD13G1242400 Ypt/Rab-GAP domain of gyp1p superfamily protein Chr13 - View
Manihot esculenta Manes.14G157900 Chromosome14 - View
Medicago truncatula Medtr4g127450 Ypt/Rab-GAP domain of gyp1p superfamily protein chr4 - View
Medicago truncatula Medtr2g037930 Ypt/Rab-GAP domain of gyp1p superfamily protein chr2 + View
Nicotiana tabacum Nitab4.5_0000617g0010 Rab-GTPase-TBC domain Nitab4.5_0000617 + View
Punica granatum PGR142G3732 NC_045128.1 + View
Prunus persica Prupe.1G076400 K18469 - TBC1 domain family member 5 (TBC1D5) Pp01 - View
Pisum sativum Psat1g145440 Rab-GTPase-TBC domain chr1LG6 + View
Pisum sativum Psat4g013240 Rab-GTPase-TBC domain chr4LG4 + View
Papaver somniferum PSO170G4191 NC_039360.1 + View
Papaver somniferum PSO063G3607 NC_039364.1 - View
Populus trichocarpa Potri.018G143100 K18469 - TBC1 domain family member 5 (TBC1D5) Chr18 - View
Populus trichocarpa Potri.006G076000 K18469 - TBC1 domain family member 5 (TBC1D5) Chr06 - View
Phaseolus vulgaris Phvul.003G141700 PTHR22957:SF28 - TBC1 DOMAIN FAMILY MEMBER 5 Chr03 + View
Phaseolus vulgaris Phvul.009G236600 PTHR22957//PTHR22957:SF274 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Chr09 - View
Rosa chinensis RcHm_v2.0_Chr4g0399721 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim01G0118100 chr01 - View
Striga asiatica SGA_v2.0_scaffold31G12758 scaffold31 + View
Salix brachista Sabra18G0116900 GWHAAZH00000018 - View
Salix brachista Sabra06G0056800 GWHAAZH00000006 - View
Schrenkiella parvula Sp7g27760 PTHR22957:SF28 - TBC1 DOMAIN FAMILY MEMBER 5 ch7-5 + View
Solanum pennellii Sopen07g004770 Ypt/Rab-GAP domain of gyp1p superfamily protein | FUNCTIONS IN: RAB GTPase activator activity | INVOLVED IN: regulation of Rab GTPase activity | LOCATED IN: intracellular | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RabGAP/TBC | BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein Spenn-ch07 - View
Theobroma cacao Thecc.09G185500 Ypt/Rab-GAP domain of gyp1p superfamily protein Chromosome_9 + View
Vigna mungo VMungo1309G1566 CM024072.1 + View
Vanilla planifolia HPP92_017117 TBC1 domain family member 5 *** CM028157.1 + View
Vanilla planifolia HPP92_017388 TBC1 domain family member-like protein *** CM028157.1 + View