Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Lalb_Chr04g0252751 PF06012//PF06025 - Domain of Unknown Function (DUF908) (DUF908) // Domain of Unknown Function (DUF913) (DUF913) Lalb_Chr04 + View
Lalb_Chr23g0269951 KOG0940 - Ubiquitin protein ligase RSP5/NEDD4 Lalb_Chr23 + View
Lalb_Chr08g0242601 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Lalb_Chr08 - View
Lalb_Chr17g0344621 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Lalb_Chr17 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G9560 LG-4 + View
Acer truncatum Atru.chr13.975 chr13 + View
Actinidia chinensis Actinidia19253 Lachesis_group28 + View
Actinidia chinensis Actinidia29657 Lachesis_group7 + View
Actinidia chinensis Actinidia10269 Lachesis_group26 + View
Avicennia marina MSTRG.24981 ScioBoG_4119_HRSCAF_4138 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CI62AJ K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I0605Y K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PS3G0C K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) arahy.Tifrunner.gnm1.Arahy.08 - View
Amborella trichopoda ATR0767G187 AmTr_v1.0_scaffold00033 + View
Beta vulgaris EL10Ac1g00487 PTHR11254//PTHR11254:SF334 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED Chr1_EL10_PGA_scaffold3 + View
Camellia sinensis var. sinensis CSS0007399 PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Vitis vinifera] Chr9 - View
Cicer arietinum L. Ca_05473_v3 Ca_LG2_v3 - View
Corylus avellana Haze_22488 Similar to UPL2: E3 ubiquitin-protein ligase UPL2 (Arabidopsis thaliana OX%3D3702) 3 - View
Coffea canephora Cc10_g08380 E3 ubiquitin protein ligase upl2, putative chr10 + View
Citrus clementina Ciclev10000001m.g scaffold_5 + View
Ceratophyllum demersum CDE07G0942 5 + View
Ceratophyllum demersum CDE04G1670 2 - View
Carpinus fangiana Cfa013814 Cfa05 - View
Carya illinoinensis CiPaw.07G163100 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Chr07 + View
Carya illinoinensis CiPaw.08G057100 KOG0939 - E3 ubiquitin-protein ligase/Putative upstream regulatory element binding protein Chr08 - View
Citrullus lanatus ClCG08G011550 ubiquitin-protein ligase 2 LENGTH=3658 CG_Chr08 + View
Cucumis melo MELO3C011072.2 E3 ubiquitin-protein ligase UPL1-like chr03 - View
Carica papaya Cpa.g.sc21.42 supercontig_21 - View
Chenopodium quinoa AUR62014369 UPL1: E3 ubiquitin-protein ligase UPL1 C_Quinoa_Scaffold_1566 - View
Chenopodium quinoa AUR62019112 UPL1: E3 ubiquitin-protein ligase UPL1 C_Quinoa_Scaffold_3876 - View
Cucumis sativus L. CsaV3_2G030130 E3 ubiquitin-protein ligase UPL1-like chr2 + View
Daucus carota DCAR_009555 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_020028 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv44876 GWHABJS00000002 - View
Durio zibethinus Duzib093G1788 NW_019167937.1 - View
Durio zibethinus Duzib116G0124 NW_019167949.1 + View
Durio zibethinus Duzib041G0164 NW_019167826.1 + View
Erigeron canadensis ECA247G4116 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.F02160 Chr06 + View
Fragaria x ananassa FAN08G1002 PTHR11254//PTHR11254:SF334 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED Fvb5-3 - View
Fragaria x ananassa FAN04G1446 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Fvb5-4 + View
Gossypium hirsutum Gohir.D05G221100 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) D05 + View
Gossypium hirsutum Gohir.D05G266800 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) D05 + View
Gossypium hirsutum Gohir.A06G030900 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) A06 + View
Gossypium hirsutum Gohir.A05G218400 PTHR11254//PTHR11254:SF334 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED A05 + View
Gossypium hirsutum Gohir.D06G030100 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) D06 + View
Gossypium hirsutum Gohir.A05G264300 PTHR11254//PTHR11254:SF334 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED A05 + View
Glycine max Glyma.14G183000 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Gm14 - View
Glycine max Glyma.02G216000 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Gm02 - View
Glycine max Glyma.04G096900 KOG0939 - E3 ubiquitin-protein ligase/Putative upstream regulatory element binding protein Gm04 - View
Gossypium raimondii Gorai.009G228200 Chr09 + View
Gossypium raimondii Gorai.009G278900 Chr09 + View
Gossypium raimondii Gorai.010G033100 Chr10 + View
Helianthus annuus HanXRQChr05g0163491 Putative HECT domain; UBA-like; Armadillo-type fold; Domain of unknown function DUF4414 HanXRQChr05 - View
Hydrangea macrophylla Hma1.2p1_0125F.1_g058695 Hma1.2p1_0125F.1 + View
Hydrangea macrophylla Hma1.2p1_0010F.1_g006490 Hma1.2p1_0010F.1 + View
Lotus japonicus LjContig00408g0027979 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Contig00408 + View
Lotus japonicus Lj1g0021401 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) chr1 - View
Lonicera japonica Lj4C86T7 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_6_107380 PF06012 - Domain of Unknown Function (DUF908) (DUF908) Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_1_2001 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Lsat_1_v8_lg_1 + View
Magnolia biondii MBI16_g07279_MAGBIO AED:0.08 Chr16 + View
Magnolia biondii MBI16_g27902_MAGBIO AED:0.04 Chr16 + View
Malus domestica MD15G1388600 ubiquitin-protein ligase 2 Chr15 + View
Malus domestica MD08G1203000 ubiquitin-protein ligase 2 Chr08 - View
Manihot esculenta Manes.18G057015 Chromosome18 + View
Manihot esculenta Manes.05G189200 Chromosome05 + View
Medicago truncatula Medtr5g066710 E3 ubiquitin-protein ligase UPL1-like protein chr5 - View
Nelumbo nucifera Nn5g29819 chr5 + View
Nicotiana tabacum Nitab4.5_0000131g0010 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote, Armadillo-type fold, E3 ubiquitin ligase, domain of unknown function DUF908, HECT, Ubiquitin-associated domain/translation elongation factor EF-Ts, N-terminal, E3 ubiquitin ligase, domain of unknown function DUF913, Ubiquitin interacting motif, UBA-like, Domain of unknown function DUF4414 Nitab4.5_0000131 + View
Punica granatum PGR031G3206 NC_045127.1 + View
Prunus persica Prupe.1G535000 PTHR11254//PTHR11254:SF334 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED Pp01 + View
Pisum sativum Psat5g049800 HECT-domain (ubiquitin-transferase) chr5LG3 - View
Populus trichocarpa Potri.002G110500 PTHR11254//PTHR11254:SF334 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED Chr02 + View
Phaseolus vulgaris Phvul.008G183200 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Chr08 - View
Phaseolus vulgaris Phvul.009G034900 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Chr09 + View
Quercus lobata QL09p018620 9 - View
Rosa chinensis RcHm_v2.0_Chr7g0234861 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim07G0213300 chr07 - View
Salix brachista Sabra02G0087000 GWHAAZH00000002 + View
Sechium edule Sed0006720 LG04 + View
Solanum lycopersicum Solyc04g076620.4 E3 ubiquitin-protein ligase UPL2 (AHRD V3.3 *** A0A2G2X032_CAPBA) SL4.0ch04 - View
Solanum pennellii Sopen04g030340 encodes a ubiquitin-protein ligase-like protein containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | ubiquitin-protein ligase 2 (UPL2) | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process | LOCATED IN: cytosol, mitochondrion, ubiquitin ligase complex, nucleus | EXPRESSED IN: male gametophyte, cultured cell, pollen tube | EXPRESSED DURING: M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal , Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote , E3 ubiquitin ligase, domain of unknown function DUF913 , HECT , Armadillo-type fold , Ubiquitin interacting motif , E3 ubiquitin ligase, domain of unknown function DUF908 , UBA-like | BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 1 Spenn-ch04 - View
Trochodendron aralioides TAR381G0008 group11 + View
Trochodendron aralioides TAR625G1466 group4 + View
Theobroma cacao Thecc.08G073800 E3 ubiquitin-protein ligase UPL2 Chromosome_8 - View
Tarenaya hassleriana THA.LOC104799856 E3 ubiquitin-protein ligase UPL2-like NW_010968608.1 + View
Trifolium pratense TPR.G6372 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI12G0371 The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon NC_052243.1 - View
Tripterygium wilfordii TWI56G1479 NC_052242.1 + View
Vaccinium macrocarpon vmacro04636 Similar to UPL2: E3 ubiquitin-protein ligase UPL2 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01009206001 chr18 - View