Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
HanXRQCPg0580111 Putative clpP, Ser active site; Clp protease proteolytic subunit /Translocation-enhancing protein TepA; ClpP/crotonase-like domain HanXRQCP - View
HanXRQChr10g0318131 Putative clpP, Ser active site; Clp protease proteolytic subunit /Translocation-enhancing protein TepA; ClpP/crotonase-like domain HanXRQChr10 + View
HanXRQChr00c0557g0575781 Putative clp protease proteolytic subunit /Translocation-enhancing protein TepA; ClpP/crotonase-like domain HanXRQChr00c0557 + View
HanXRQChr10g0289321 Probable ATP-dependent Clp protease proteolytic subunit HanXRQChr10 - View
HanXRQChr10g0283621 Putative ATP-dependent Clp protease proteolytic subunit; Clp protease proteolytic subunit /Translocation-enhancing protein TepA; ClpP/crotonase-like domain HanXRQChr10 - View
HanXRQChr01g0020281 Putative clpP, Ser active site; Clp protease proteolytic subunit /Translocation-enhancing protein TepA; ClpP/crotonase-like domain HanXRQChr01 + View
HanXRQChr10g0284311 Putative clpP, Ser active site; Clp protease proteolytic subunit /Translocation-enhancing protein TepA; ClpP/crotonase-like domain HanXRQChr10 - View
HanXRQChr16g0529031 Putative clpP, Ser active site; Clp protease proteolytic subunit /Translocation-enhancing protein TepA; ClpP/crotonase-like domain HanXRQChr16 - View
HanXRQChr11g0326901 Putative clpP, Ser active site; Clp protease proteolytic subunit /Translocation-enhancing protein TepA; ClpP/crotonase-like domain HanXRQChr11 - View
HanXRQChr02g0052561 Putative clp protease proteolytic subunit /Translocation-enhancing protein TepA; ClpP/crotonase-like domain HanXRQChr02 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL2G21640 scaffold_2 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3I6E4U PTHR10381:SF19 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1 arahy.Tifrunner.gnm1.scaffold_36 + View
Arabidopsis thaliana ATCG00670 plastid-encoded CLP P Encodes the only ClpP (caseinolytic protease) encoded within the plastid genome. Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). Part of the 350 kDa chloroplast Clp complex. The name reflects nomenclature described in Adam et. al (2001). plastid-encoded CLP P (PCLPP)%3B FUNCTIONS IN: serine-type peptidase activity%3B INVOLVED IN: proteolysis%3B LOCATED IN: chloroplast thylakoid membrane%2C chloroplastic endopeptidase Clp complex%2C plastid stroma%2C chloroplast%2C chloroplast stroma%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase S14%2C ClpP%2C active site (InterPro:IPR018215)%2C Peptidase S14%2C ClpP (InterPro:IPR001907)%3B BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 2 (TAIR:AT1G12410.1). ChrC - View
Brassica napus BNapus_Darmor_BZH_scaffold_287p00220 BNapus_Darmor_BZH_scaffold_287 - View
Brassica napus C02p43600 C02 - View
Brassica napus C06p22930 C06 + View
Brassica oleracea BolSC46t61010H Boleracea_scaffold_46 - View
Brassica oleracea BolSC49t61171H Boleracea_scaffold_49 + View
Brassica oleracea BolSC29t60479H Boleracea_scaffold_29 - View
Brassica oleracea BolSC35t60659H Boleracea_scaffold_35 - View
Brassica oleracea BolSC29t60600H Boleracea_scaffold_29 - View
Brassica rapa BraSC138t45563Z Brapa_scaffold_138 + View
Brassica rapa BraSC58t46495Z Brapa_scaffold_58 - View
Brassica rapa BraSC59t46581Z Brapa_scaffold_59 + View
Brassica rapa BraSC103t45452Z Brapa_scaffold_103 + View
Beta vulgaris EL10As12g24030 K01358 - ATP-dependent Clp protease, protease subunit (clpP, CLPP) Scaffold_0012 - View
Cardamine hirsuta CARHR282180 ATP-dependent Clp protease proteolytic subunit ChrC - View
Daucus carota DCAR_032510 ATP-dependent Clp protease proteolytic subunit DCARv2_PT - View
Gossypium hirsutum Gohir.D01G102021 PTHR10381:SF19 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1 D01 - View
Lupinus albus Lalb_Chr07g0192041 PTHR10381//PTHR10381:SF19 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1 Lalb_Chr07 + View
Lotus japonicus LjContig00318g0024179 PTHR10381:SF19 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1 Contig00318 - View
Medicago truncatula Medtr0002s0730 ATP-dependent Clp protease proteolytic protein scaffold0002 - View
Medicago truncatula Medtr4g034690 ATP-dependent Clp protease proteolytic protein chr4 - View
Punica granatum PGR111G0023 NC_035240.1 - View
Papaver somniferum PSO548G0031 NC_029434.1 - View
Rosa chinensis RcHm_v2.0_CPg0501991 RcHm_v2.0_CP + View
Sechium edule Sed0002260 LG13 + View
Sechium edule Sed0022936 LG13 + View
Sechium edule Sed0002969 Contig00297 - View
Solanum lycopersicum Solyc00g500070.1 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** CLPP_SOLTU) SL4.0ch00 - View
Solanum lycopersicum Solyc00g500023.1 ATP-dependent Clp protease proteolytic subunit (AHRD V3.3 *** CLPP_SOLTU) SL4.0ch00 - View
Selaginella moellendorffii SMO086G0017 scaffold_175 - View
Solanum tuberosum PGSC0003DMG401005300 ATP-dependent Clp protease proteolytic subunit ST4.03ch01 - View
Selenicereus undatus Hund28488 Scaffold_19151 + View
Selenicereus undatus Hund28742 Scaffold_16673 - View
Selenicereus undatus Hund28754 Scaffold_16694 - View
Selenicereus undatus Hund27981 Scaffold_19928 - View
Selenicereus undatus Hund28515 Scaffold_17404 - View
Selenicereus undatus Hund27464 Scaffold_13745 - View
Selenicereus undatus Hund28049 Scaffold_19530 + View
Selenicereus undatus Hund28674 Scaffold_20362 - View
Selenicereus undatus Hund28469 Scaffold_11104 + View
Selenicereus undatus Hund28105 Scaffold_18263 - View
Selenicereus undatus Hund28264 Scaffold_18707 - View
Selenicereus undatus Hund04054 Scaffold_19641 - View
Selenicereus undatus Hund28628 Scaffold_19380 - View
Selenicereus undatus Hund08806 Scaffold_33676 + View
Selenicereus undatus Hund28890 Scaffold_8932 + View
Selenicereus undatus Hund28455 Scaffold_15714 - View
Selenicereus undatus Hund27574 Scaffold_19921 - View
Selenicereus undatus Hund08572 Scaffold_33676 + View