Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G11670 LG-3 - View
Arabidopsis lyrata AL8G31320 scaffold_8 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LU4DEZ PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) arahy.Tifrunner.gnm1.Arahy.17 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LXD9J9 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) arahy.Tifrunner.gnm1.Arahy.01 + View
Arabidopsis thaliana AT5G55740 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a member of the E+ subgroup of the PPR protein family%2C containing the E and E+ motifs following a tandem array of PPR motifs. It also contains an unknown motif consisting of 15 aa%2C which is highly conserved in some PPR proteins%2C including CRR4. CRR21 is involved in RNA editing of the site 2 of ndhD (ndhD-2)%2Cwhich encodes a subunit of the NDH complex. The RNA editing changes aa 128 from Ser to Leu. Mutants have impaired NDH complex activity. chlororespiratory reduction 21 (CRR21)%3B INVOLVED IN: mRNA modification%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G21300.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT5G56310 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: mitochondrial editing factor 21 (TAIR:AT2G20540.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Capsicum annuum CAN.G623.28 PGAv.1.6.scaffold623 - View
Cicer arietinum L. Ca_06357_v3 Ca_LG2_v3 - View
Citrus clementina Ciclev10013445m.g scaffold_6 + View
Cardamine hirsuta CARHR269060 Pentatricopeptide repeat-containing protein Chr8 - View
Cardamine hirsuta CARHR269710 Pentatricopeptide repeat-containing protein Chr8 + View
Carica papaya Cpa.g.sc12.223 supercontig_12 - View
Capsella rubella Carub.0008s1663 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_8 + View
Capsella rubella Carub.0008s1612 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_8 - View
Durio zibethinus Duzib213G0144 NW_019167993.1 + View
Eutrema salsugineum Thhalv10015484m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_2 - View
Fragaria vesca FvH4_3g42650 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb3 + View
Gossypium hirsutum Gohir.D13G141200 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D13 - View
Gossypium hirsutum Gohir.D11G240400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D11 - View
Glycine max Glyma.18G085900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm18 - View
Gossypium raimondii Gorai.013G158100 Chr13 - View
Lupinus albus Lalb_Chr10g0107221 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr10 - View
Lotus japonicus LjContig00272g0018740 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Contig00272 - View
Lonicera japonica Lj1P892T36 GWHAAZE00000001 - View
Malus domestica MD11G1207600 Pentatricopeptide repeat (PPR) superfamily protein Chr11 - View
Medicago truncatula Medtr5g094220 PPR containing plant-like protein chr5 - View
Punica granatum PGR031G0483 NC_045127.1 + View
Pisum sativum Psat2g010600 PPR repeat family chr2LG1 - View
Rosa chinensis RcHm_v2.0_Chr5g0074761 RcHm_v2.0_Chr5 - View
Theobroma cacao Thecc.07G009500 Tetratricopeptide repeat-like superfamily protein Chromosome_7 + View
Tarenaya hassleriana THA.LOC104822785 putative pentatricopeptide repeat-containing protein At3g11460 NW_010966725.1 + View
Vitis vinifera GSVIVG01014727001 chr19 - View