Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
HanXRQChr10g0284451 Putative uncharacterised protein family Ycf2 HanXRQChr10 + View
HanXRQChr11g0327041 Putative uncharacterised protein family Ycf2 HanXRQChr11 + View
HanXRQChr13g0413621 Uncharacterized protein, partly conserved in plant genome(s) HanXRQChr13 + View
HanXRQChr12g0369911 Putative ATPase, AAA-type, core; Uncharacterised protein family Ycf2; P-loop containing nucleoside triphosphate hydrolase HanXRQChr12 + View
HanXRQChr17g0569651 Putative ATPase, AAA-type, core; P-loop containing nucleoside triphosphate hydrolase HanXRQChr17 + View
HanXRQChr11g0321171 Probable protein Ycf2 HanXRQChr11 + View
HanXRQChr00c0349g0573981 Putative uncharacterised protein family Ycf2 HanXRQChr00c0349 + View
HanXRQChr00c0593g0576441 Putative uncharacterised protein family Ycf2 HanXRQChr00c0593 + View
HanXRQChr10g0317961 Putative ATPase, AAA-type, core; Uncharacterised protein family Ycf2; P-loop containing nucleoside triphosphate hydrolase HanXRQChr10 - View
HanXRQChr01g0020161 Putative ATPase, AAA-type, core; Uncharacterised protein family Ycf2; P-loop containing nucleoside triphosphate hydrolase HanXRQChr01 - View
HanXRQChr04g0127421 Uncharacterized protein HanXRQChr04 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Arabidopsis lyrata AL2G21800 scaffold_2 + View
Arabidopsis lyrata AL2G20470 scaffold_2 - View
Amaranthus hybridus Ah.10g027230 Protein Ycf2 AmaHy_arrow1_Scaffold_10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SV0IPA arahy.Tifrunner.gnm1.scaffold_36 + View
Arabidopsis thaliana ATCG00860 Chloroplast Ycf2;ATPase, AAA type, core Encodes an unknown protein. This gene is regulated by AtSIG6 transcriptionally. YCF2.1%3B FUNCTIONS IN: nucleoside-triphosphatase activity%2C nucleotide binding%2C ATP binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%2C membrane%3B EXPRESSED IN: guard cell%2C leaf%3B CONTAINS InterPro DOMAIN/s: ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C ATPase%2C AAA-type%2C core (InterPro:IPR003959)%2C Chloroplast Ycf2 (InterPro:IPR008543)%3B BEST Arabidopsis thaliana protein match is: Chloroplast Ycf2%3BATPase%2C AAA type%2C core (TAIR:ATCG01280.1). ChrC + View
Brassica napus C04p22510 C04 - View
Brassica napus C09p24760 C09 - View
Brassica oleracea BolC2t10583H C2 + View
Brassica oleracea BolSC56t61241H Boleracea_scaffold_56 - View
Brassica oleracea BolSC35t60677H Boleracea_scaffold_35 + View
Brassica oleracea BolSC44t60838H Boleracea_scaffold_44 - View
Brassica oleracea BolSC37t60781H Boleracea_scaffold_37 + View
Brassica oleracea BolSC47t61052H Boleracea_scaffold_47 + View
Brassica oleracea BolSC35t60720H Boleracea_scaffold_35 - View
Brassica oleracea BolSC45t60890H Boleracea_scaffold_45 + View
Brassica oleracea BolSC29t60489H Boleracea_scaffold_29 + View
Brassica oleracea BolC7t41704H C7 - View
Brassica oleracea BolSC29t60617H Boleracea_scaffold_29 + View
Brassica rapa BraSC58t46446Z Brapa_scaffold_58 + View
Brassica rapa BraSC138t45546Z Brapa_scaffold_138 - View
Brassica rapa BraSC143t45642Z Brapa_scaffold_143 + View
Brassica rapa BraSC25t45892Z Brapa_scaffold_25 + View
Brassica rapa BraSC103t45490Z Brapa_scaffold_103 + View
Beta vulgaris EL10As12g24038 Scaffold_0012 + View
Beta vulgaris EL10As15g24107 Scaffold_0015 - View
Capsicum annuum CAN.G1045.5 PGAv.1.6.scaffold1045 + View
Capsicum annuum CAN.G129.16 PGAv.1.6.scaffold129 + View
Capsicum annuum CAN.G413.6 PGAv.1.6.scaffold413 + View
Capsicum annuum CAN.G134.4 PGAv.1.6.scaffold134 + View
Daucus carota DCAR_032529 hypothetical protein DCARv2_PT + View
Erigeron canadensis ECA074G0010 Conyza_canadensis_unscaffolded:230 - View
Erythranthe guttata Migut.D01323 scaffold_4 - View
Erythranthe guttata Migut.D01437 scaffold_4 + View
Erythranthe guttata Migut.D01372 scaffold_4 + View
Fragaria vesca FvH4_c3g00160 PF05695 - Plant protein of unknown function (DUF825) (DUF825) contig_3 - View
Gossypium hirsutum Gohir.A05G086350 A05 + View
Lupinus albus Lalb_Chr23g0274311 PF05695 - Plant protein of unknown function (DUF825) (DUF825) Lalb_Chr23 + View
Lupinus albus Lalb_Chr07g0191931 PF00004//PF05695 - ATPase family associated with various cellular activities (AAA) (AAA) // Plant protein of unknown function (DUF825) (DUF825) Lalb_Chr07 - View
Lotus japonicus LjContig00319g0003005 PF05695 - Plant protein of unknown function (DUF825) (DUF825) Contig00319 + View
Lotus japonicus LjContig00318g0022366 PF00004//PF05695 - ATPase family associated with various cellular activities (AAA) (AAA) // Plant protein of unknown function (DUF825) (DUF825) Contig00318 + View
Lotus japonicus Lj4g0020232 PF00004//PF05695 - ATPase family associated with various cellular activities (AAA) (AAA) // Plant protein of unknown function (DUF825) (DUF825) chr4 - View
Lotus japonicus LjContig00489g0008652 PF00004//PF05695 - ATPase family associated with various cellular activities (AAA) (AAA) // Plant protein of unknown function (DUF825) (DUF825) Contig00489 + View
Lonicera japonica Lj2A1237G134 GWHAAZE00000002 + View
Lonicera japonica Lju5009C0G1 GWHAAZE00000106 + View
Medicago truncatula Medtr4g051435 Ycf2; ATPase, AAA type, core protein chr4 + View
Nelumbo nucifera Nn021s41511 scaffold021 - View
Nelumbo nucifera Nn070s42377 scaffold070 + View
Olea europaea Oeu062827.1 chr1 - View
Olea europaea Oeu058356.1 chr19 - View
Olea europaea Oeu054716.1 chr14 + View
Punica granatum PGR111G0100 NC_035240.1 + View
Papaver somniferum PSO548G0004 NC_029434.1 + View
Rosa chinensis RcHm_v2.0_Chr2g0118431 RcHm_v2.0_Chr2 - View
Rosa chinensis RcHm_v2.0_CPg0501801 RcHm_v2.0_CP - View
Rosa chinensis RcHm_v2.0_CPg0502611 RcHm_v2.0_CP + View
Salix brachista SabraPtG0004600 GWHAAZH00000021 + View
Sechium edule Sed0025629 LG13 + View
Sechium edule Sed0008047 Contig00297 + View
Solanum lycopersicum Solyc12g035760.1 Protein Ycf2 (AHRD V3.3 *-* A0A167NIB9_9SOLA) SL4.0ch12 + View
Solanum lycopersicum Solyc02g011920.2 Protein Ycf2 (AHRD V3.3 *-* A0A0U1ZJJ5_9SOLN) SL4.0ch02 - View
Solanum lycopersicum Solyc00g500037.1 Protein Ycf2 (AHRD V3.3 *** A0A1Z1GA65_LITCN) SL4.0ch00 + View
Solanum lycopersicum Solyc00g500128.1 30S ribosomal protein S14, chloroplastic (AHRD V3.3 *-* A0A2G2X601_CAPBA) SL4.0ch00 - View
Solanum lycopersicum Solyc01g017060.2 Protein Ycf2 (AHRD V3.3 *-* A0A167NIB9_9SOLA) SL4.0ch01 - View
Solanum lycopersicum Solyc00g500081.1 Protein Ycf2 (AHRD V3.3 *** A0A1Z1GA65_LITCN) SL4.0ch00 + View
Selenicereus undatus Hund22779 Scaffold_33680 + View
Selenicereus undatus Hund27881 Scaffold_7720 + View
Selenicereus undatus Hund08796 Scaffold_33676 - View
Selenicereus undatus Hund07987 Scaffold_33676 + View