Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
FAN15G0478 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2-4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G17480 LG-2 - View
Acer truncatum Atru.chr7.2301 chr7 - View
Acer truncatum Atru.chr7.2398 chr7 + View
Arabidopsis lyrata AL4G17020 scaffold_4 + View
Arabidopsis lyrata AL7G19380 scaffold_7 - View
Avicennia marina MSTRG.11682 ScioBoG_17730_HRSCAF_17811 + View
Avicennia marina MSTRG.25995 ScioBoG_4119_HRSCAF_4138 + View
Avicennia marina MSTRG.11793 ScioBoG_17730_HRSCAF_17811 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PALU6L PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) arahy.Tifrunner.gnm1.Arahy.19 + View
Arabidopsis thaliana AT2G25580 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G32450.1)%3B Has 21306 Blast hits to 10572 proteins in 176 species: Archae - 0%3B Bacteria - 9%3B Metazoa - 6%3B Fungi - 21%3B Plants - 21172%3B Viruses - 0%3B Other Eukaryotes - 98 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT4G32430 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G27610.1)%3B Has 44749 Blast hits to 13591 proteins in 248 species: Archae - 1%3B Bacteria - 28%3B Metazoa - 59%3B Fungi - 99%3B Plants - 43967%3B Viruses - 0%3B Other Eukaryotes - 595 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaC09g52028 ChrC09 + View
Brassica napus C01p06550 C01 - View
Brassica napus A01p05940 A01 - View
Brassica oleracea BolC1t00648H C1 - View
Brassica rapa BraA01t00560Z A01 - View
Corylus avellana Haze_21569 Similar to PCMP-H63: Pentatricopeptide repeat-containing protein At4g32450, mitochondrial (Arabidopsis thaliana OX%3D3702) 3 + View
Coffea canephora Cc11_g01830 Putative Pentatricopeptide repeat-containing protein At2g34370, mitochondrial chr11 - View
Cardamine hirsuta CARHR240350 Pentatricopeptide repeat-containing protein Chr7 + View
Cardamine hirsuta CARHR115760 Pentatricopeptide repeat-containing protein Chr4 - View
Carya illinoinensis CiPaw.08G013300 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr08 + View
Carya illinoinensis CiPaw.04G170900 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr04 - View
Citrullus lanatus ClCG09G002520 Pentatricopeptide repeat-containing family protein CG_Chr09 - View
Cucumis melo MELO3C023386.2 Pentatricopeptide repeat-containing family protein chr01 + View
Chenopodium quinoa AUR62011083 PCMP-H12: Pentatricopeptide repeat-containing protein At1g08070, chloroplastic C_Quinoa_Scaffold_3799 - View
Capsella rubella Carub.0007s0814 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_7 - View
Capsella rubella Carub.0004s0529 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_4 + View
Cucumis sativus L. CsaV3_1G029810 Pentatricopeptide repeat chr1 - View
Cucumis sativus L. CsaV3_7G032800 Pentatricopeptide repeat-containing protein chr7 + View
Davidia involucrata Dinv30177 GWHABJS00000003 - View
Eucalyptus grandis Eucgr.C01788 Chr03 - View
Eutrema salsugineum Thhalv10024867m.g PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_1 - View
Eutrema salsugineum Thhalv10000083m.g PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_15 - View
Fragaria vesca FvH4_2g29640 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb2 + View
Gossypium hirsutum Gohir.A07G034100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) A07 + View
Glycine max Glyma.05G008800 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm05 + View
Glycine max Glyma.17G117001 PF01535 - PPR repeat (PPR) Gm17 + View
Helianthus annuus HanXRQChr10g0315011 Putative pentatricopeptide repeat HanXRQChr10 - View
Hydrangea macrophylla Hma1.2p1_0000F.1_g000760 Hma1.2p1_0000F.1 + View
Lupinus albus Lalb_Chr24g0402211 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lalb_Chr24 - View
Lotus japonicus Lj4g0010533 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) chr4 + View
Lactuca sativa Lsat_1_v5_gn_1_41920 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lsat_1_v8_lg_1 - View
Medicago truncatula Medtr4g113830 organelle transcript processing protein, putative chr4 - View
Nelumbo nucifera Nn8g39384 chr8 - View
Pisum sativum Psat6g029560 DYW family of nucleic acid deaminases chr6LG2 - View
Phaseolus vulgaris Phvul.003G162300 PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr03 - View
Rosa chinensis RcHm_v2.0_Chr6g0298611 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim02G0194600 chr02 - View
Rhododendron simsii Rhsim07G0155100 chr07 - View
Simmondsia chinensis Sc09g0008430 GWHAASQ00000009 + View
Simmondsia chinensis Sc18g0000890 GWHAASQ00000018 - View
Sechium edule Sed0022202 LG08 - View
Schrenkiella parvula Sp7g30220 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch7-5 + View
Trochodendron aralioides TAR625G0686 group4 + View
Theobroma cacao Thecc.09G122500 Pentatricopeptide repeat-containing protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104803665 pentatricopeptide repeat-containing protein At2g25580-like NW_010971389.1 - View
Vaccinium macrocarpon vmacro11156 Similar to PCMP-H28: Pentatricopeptide repeat-containing protein At4g21065 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G0461 CM024074.1 - View
Vitis vinifera GSVIVG01035810001 chr4 - View