Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
FAN09G2305 K09272 - structure-specific recognition protein 1 (SSRP1) Fvb6-2 - View
FAN14G0823 K09272 - structure-specific recognition protein 1 (SSRP1) Fvb6-1 - View
FAN02G3930 PTHR13711//PTHR13711:SF199 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb6-4 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G4470 LG-2 - View
Acer truncatum Atru.chr8.1903 chr8 + View
Actinidia chinensis Actinidia36023 Lachesis_group4 - View
Actinidia chinensis Actinidia06077 Lachesis_group11 - View
Arabidopsis lyrata AL5G18450 scaffold_5 + View
Avicennia marina MSTRG.3218 ScioBoG_102835_HRSCAF_103059 - View
Aquilegia oxysepala Aqoxy3G03281 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T0AAPV K09272 - structure-specific recognition protein 1 (SSRP1) arahy.Tifrunner.gnm1.Arahy.10 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QM6JB0 K09272 - structure-specific recognition protein 1 (SSRP1) arahy.Tifrunner.gnm1.Arahy.20 - View
Arabidopsis thaliana AT3G28730 high mobility group encodes a component of the FAcilitates Chromatin Transcription (FACT) complex%2C SSRP1. Along with STP16 binds to the promoter of FLC. high mobility group (HMG)%3B CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein (InterPro:IPR000969)%2C High mobility group%2C superfamily (InterPro:IPR009071)%2C High mobility group%2C HMG1/HMG2 (InterPro:IPR000910)%3B BEST Arabidopsis thaliana protein match is: high mobility group B1 (TAIR:AT3G51880.2)%3B Has 8066 Blast hits to 7188 proteins in 653 species: Archae - 0%3B Bacteria - 14%3B Metazoa - 5623%3B Fungi - 822%3B Plants - 671%3B Viruses - 15%3B Other Eukaryotes - 921 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR1120G139 AmTr_v1.0_scaffold00078 - View
Brassica carinata BcaC06g33636 ChrC06 + View
Brassica carinata BcaC03g17525 ChrC03 + View
Brassica oleracea BolC7t44284H C7 + View
Capsicum annuum CAN.G206.123 PGAv.1.6.scaffold206 - View
Cannabis sativa CANSAT64G1196 NC_044379.1 - View
Corylus avellana Haze_14579 Similar to SSRP1: FACT complex subunit SSRP1 (Vicia faba OX%3D3906) 5 + View
Coffea canephora Cc07_g03050 FACT complex subunit SSRP1 chr7 - View
Citrus clementina Ciclev10011266m.g scaffold_6 - View
Carya illinoinensis CiPaw.04G019600 K09272 - structure-specific recognition protein 1 (SSRP1) Chr04 + View
Carya illinoinensis CiPaw.03G029600 K09272 - structure-specific recognition protein 1 (SSRP1) Chr03 + View
Citrullus lanatus ClCG10G014840 FACT complex subunit SSRP1 CG_Chr10 - View
Cucumis melo MELO3C009890.2 FACT complex subunit SSRP1 chr04 - View
Corchorus olitorius COL.COLO4_25165 Structure-specific recognition protein AWUE01018934.1 + View
Cucumis sativus L. CsaV3_3G041690 FACT complex subunit SSRP1 chr3 + View
Daucus carota DCAR_011159 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv33721 GWHABJS00000014 - View
Durio zibethinus Duzib147G1608 NW_019168470.1 - View
Durio zibethinus Duzib264G0140 NW_019167960.1 + View
Erigeron canadensis ECA238G2291 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.I01920 Chr09 - View
Erythranthe guttata Migut.K01331 scaffold_11 + View
Erythranthe guttata Migut.H00892 scaffold_8 - View
Eutrema salsugineum Thhalv10003803m.g PTHR13711//PTHR13711:SF199 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN // SUBFAMILY NOT NAMED scaffold_6 - View
Fragaria vesca FvH4_6g49210 K09272 - structure-specific recognition protein 1 (SSRP1) Fvb6 + View
Gossypium hirsutum Gohir.D09G021100 K09272 - structure-specific recognition protein 1 (SSRP1) D09 - View
Gossypium hirsutum Gohir.A09G021800 K09272 - structure-specific recognition protein 1 (SSRP1) A09 - View
Glycine max Glyma.13G064800 PTHR13711//PTHR13711:SF199 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN // SUBFAMILY NOT NAMED Gm13 - View
Gossypium raimondii Gorai.006G024900 Chr06 - View
Lupinus albus Lalb_Chr06g0175461 K09272 - structure-specific recognition protein 1 (SSRP1) Lalb_Chr06 + View
Lupinus albus Lalb_Chr02g0159551 K09272 - structure-specific recognition protein 1 (SSRP1) Lalb_Chr02 - View
Lotus japonicus Lj2g0002473 K09272 - structure-specific recognition protein 1 (SSRP1) chr2 + View
Lonicera japonica Lj7A400T32 GWHAAZE00000007 + View
Lonicera japonica Lju41A25T61 GWHAAZE00000094 + View
Lactuca sativa Lsat_1_v5_gn_2_88641 K09272 - structure-specific recognition protein 1 (SSRP1) Lsat_1_v8_lg_2 + View
Malus domestica MD09G1047500 high mobility group Chr09 - View
Malus domestica MD17G1047600 high mobility group Chr17 - View
Manihot esculenta Manes.15G176600 Chromosome15 - View
Nelumbo nucifera Nn4g23059 chr4 - View
Nicotiana tabacum Nitab4.5_0009739g0020 Structure-specific recognition protein, SSRP1 domain, High mobility group box domain, Domain of unknown function DUF1747, Pleckstrin homology-like domain Nitab4.5_0009739 + View
Nicotiana tabacum Nitab4.5_0000564g0350 High mobility group box domain, Structure-specific recognition protein, SSRP1 domain, Pleckstrin homology-like domain Nitab4.5_0000564 + View
Olea europaea Oeu033336.1 chr10 + View
Petunia axillaris Peaxi162Scf00129g00539 FACT complex subunit SSRP1 Peaxi162Scf00129 + View
Punica granatum PGR142G0788 NC_045128.1 - View
Prunus persica Prupe.3G271500 K09272 - structure-specific recognition protein 1 (SSRP1) Pp03 + View
Papaver somniferum PSO832G3448 NC_039367.1 - View
Populus trichocarpa Potri.004G124000 K09272 - structure-specific recognition protein 1 (SSRP1) Chr04 + View
Populus trichocarpa Potri.017G078500 K09272 - structure-specific recognition protein 1 (SSRP1) Chr17 - View
Phaseolus vulgaris Phvul.004G026200 K09272 - structure-specific recognition protein 1 (SSRP1) Chr04 + View
Quercus lobata QL02p080714 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0169081 RcHm_v2.0_Chr2 + View
Rhododendron simsii RhsimUnG0055900 ctg162 - View
Salix brachista Sabra17G0069700 GWHAAZH00000017 - View
Sechium edule Sed0022026 LG06 - View
Solanum lycopersicum Solyc02g087680.1 FACT complex subunit SSRP1 (AHRD V3.3 *-* A0A1U8FYB7_CAPAN) SL4.0ch02 - View
Schrenkiella parvula Sp2g17380 K09272 - structure-specific recognition protein 1 (SSRP1) ch2-4 + View
Solanum pennellii Sopen02g032430 FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1) (Recombination signal sequence recognition protein 1) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle), encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC. | high mobility group (HMG) | CONTAINS InterPro DOMAIN/s: Structure-specific recognition protein , High mobility group, superfamily , High mobility group, HMG1/HMG2 | BEST Arabidopsis thaliana protein match is: high mobility group B1 Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400001414 Structure-specific recognition protein ST4.03ch02 + View
Trochodendron aralioides TAR622G1354 group8 + View
Trochodendron aralioides TAR371G0510 group13 - View
Theobroma cacao Thecc.04G075500 High mobility group Chromosome_4 - View
Tarenaya hassleriana THA.LOC104805449 FACT complex subunit SSRP1 NW_010961290.1 + View
Tripterygium wilfordii TWI60G1051 NC_052246.1 - View
Tripterygium wilfordii TWI34G1126 NC_052235.1 + View
Utricularia gibba unitig_899.g15507 unitig_899 - View
Vaccinium macrocarpon vmacro05729 Similar to SSRP1: FACT complex subunit SSRP1 (Vicia faba OX%3D3906) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0464G0737 CM024077.1 + View
Vitis vinifera GSVIVG01011349001 chr14 - View