Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G370 LG-7 - View
Aethionema arabicum Aa31LG4G760 LG-4 - View
Acer truncatum Atru.chr7.2478 chr7 - View
Actinidia chinensis Actinidia08954 Lachesis_group2 - View
Arabidopsis lyrata AL1G27860 scaffold_1 - View
Arabidopsis lyrata AL2G40980 scaffold_2 + View
Avicennia marina MSTRG.4698 ScioBoG_102837_HRSCAF_103074 + View
Amaranthus hybridus Ah.01g020390 Protein TOPLESS (WUS-interacting protein 1) AmaHy_arrow1_Scaffold_1 + View
Aquilegia oxysepala Aqoxy7G03596 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8X014Y PTHR22847:SF480 - PROTEIN TOPLESS-RELATED arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YQ829I PTHR22847:SF480 - PROTEIN TOPLESS-RELATED arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.UFRA39 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R5Z1TJ PTHR22847:SF480 - PROTEIN TOPLESS-RELATED arahy.Tifrunner.gnm1.Arahy.19 + View
Arabidopsis thaliana AT1G15750 Transducin family protein / WD-40 repeat family protein Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs)%2C it is thought to be involved in transcriptional repression of root-promoting genes in the top half of the embryo during the transition stage of embryogenesis. It can also interact with IAA12 through the EAR domain of IAA12 and the CTLH domain of TPL. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background. Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs)%2C it is thought to be involved in transcriptional repression of root-promoting genes in the top help of the embryo during the transition stage of embryogenesis. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background. TOPLESS (TPL)%3B FUNCTIONS IN: protein binding%2C transcription repressor activity%2C protein homodimerization activity%3B INVOLVED IN: xylem and phloem pattern formation%2C response to auxin stimulus%2C primary shoot apical meristem specification%2C jasmonic acid mediated signaling pathway%3B LOCATED IN: cytosol%2C nucleus%3B EXPRESSED IN: 27 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C CTLH%2C C-terminal LisH motif (InterPro:IPR006595)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C LisH dimerisation motif (InterPro:IPR006594)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: TOPLESS-related 1 (TAIR:AT1G80490.2)%3B Has 22110 Blast hits to 13392 proteins in 605 species: Archae - 36%3B Bacteria - 4397%3B Metazoa - 7838%3B Fungi - 4804%3B Plants - 2241%3B Viruses - 6%3B Other Eukaryotes - 2788 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G80490 TOPLESS-related 1 TOPLESS-related 1 (TPR1)%3B INVOLVED IN: primary shoot apical meristem specification%3B LOCATED IN: cytosol%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C CTLH%2C C-terminal LisH motif (InterPro:IPR006595)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C LisH dimerisation motif (InterPro:IPR006594)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT1G15750.4)%3B Has 22237 Blast hits to 13013 proteins in 584 species: Archae - 42%3B Bacteria - 4724%3B Metazoa - 7551%3B Fungi - 4719%3B Plants - 2339%3B Viruses - 15%3B Other Eukaryotes - 2847 (source: NCBI BLink). TOPLESS-related 1 (TPR1)%3B INVOLVED IN: primary shoot apical meristem specification%3B LOCATED IN: cytosol%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C CTLH%2C C-terminal LisH motif (InterPro:IPR006595)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C LisH dimerisation motif (InterPro:IPR006594)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT1G15750.4)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB03g14526 ChrB03 + View
Brassica carinata BcaB02g07267 ChrB02 + View
Brassica carinata BcaC08g45317 ChrC08 - View
Brassica napus A07p26700 A07 - View
Brassica napus C06p29180 C06 - View
Brassica napus C05p13890 C05 - View
Brassica napus A06p11740 A06 - View
Brassica napus C08p44810 C08 + View
Brassica oleracea BolC6t38082H C6 - View
Brassica oleracea BolC5t30123H C5 - View
Brassica oleracea BolC8t52026H C8 + View
Brassica rapa BraA07t30313Z A07 - View
Brassica rapa BraA09t41496Z A09 + View
Beta vulgaris EL10Ac9g21867 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0028710 hypothetical protein PRUPE_ppa000478mg [Prunus persica] Chr2 + View
Cannabis sativa CANSAT56G1741 NC_044371.1 - View
Cicer arietinum L. Ca_12514_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_01045_v3 Ca_LG1_v3 + View
Corylus avellana Haze_16607 Similar to TPR1: Topless-related protein 1 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc08_g00350 Topless-related protein 1 chr8 - View
Citrus clementina Ciclev10024745m.g scaffold_7 - View
Citrus clementina Ciclev10007293m.g scaffold_1 + View
Carpinus fangiana Cfa013118 Cfa05 + View
Carpinus fangiana Cfa001935 Cfa01 + View
Cardamine hirsuta CARHR074010 WD-repeat protein, putative Chr2 - View
Cardamine hirsuta CARHR016240 WD-repeat protein, putative Chr1 - View
Carya illinoinensis CiPaw.07G225800 KOG0266//KOG0293//KOG0315 - WD40 repeat-containing protein // WD40 repeat-containing protein // G-protein beta subunit-like protein (contains WD40 repeats) Chr07 - View
Carya illinoinensis CiPaw.02G158700 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED Chr02 - View
Carya illinoinensis CiPaw.01G250700 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Chr01 - View
Citrullus lanatus ClCG05G016670 Ramosa1 enhancer locus 2 protein CG_Chr05 - View
Citrullus lanatus ClCG07G012290 WD-repeat protein, putative CG_Chr07 - View
Cucumis melo MELO3C017848.2 protein TOPLESS chr07 - View
Cucumis melo MELO3C016997.2 TOPLESS-related 1 isoform 1 chr07 + View
Carica papaya Cpa.g.sc10.139 supercontig_10 + View
Chenopodium quinoa AUR62016287 TPL: Protein TOPLESS C_Quinoa_Scaffold_3514 + View
Chenopodium quinoa AUR62011475 TPL: Protein TOPLESS C_Quinoa_Scaffold_3333 + View
Capsella rubella Carub.0001s1552 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED scaffold_1 - View
Capsella rubella Carub.0002s2707 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED scaffold_2 + View
Capsella rubella Carub.0004s0508 K14558 - periodic tryptophan protein 2 (PWP2, UTP1) scaffold_4 + View
Cucumis sativus L. CsaV3_4G001850 protein TOPLESS chr4 + View
Cucumis sativus L. CsaV3_4G036980 TOPLESS-related 1 isoform 1 chr4 - View
Daucus carota DCAR_021358 hypothetical protein DCARv2_Chr6 + View
Davidia involucrata Dinv38144 GWHABJS00000006 + View
Davidia involucrata Dinv18194 GWHABJS00000003 - View
Davidia involucrata Dinv15870 GWHABJS00000017 - View
Davidia involucrata Dinv30638 GWHABJS00000019 + View
Durio zibethinus Duzib160G0868 NW_019168015.1 + View
Durio zibethinus Duzib168G1674 NW_019168159.1 - View
Erigeron canadensis ECA246G1832 Conyza_canadensis_scaffold:8 + View
Erigeron canadensis ECA232G4370 Conyza_canadensis_scaffold:2 + View
Erigeron canadensis ECA247G3825 Conyza_canadensis_scaffold:7 - View
Erythranthe guttata Migut.I00737 scaffold_9 + View
Erythranthe guttata Migut.D01078 scaffold_4 - View
Eutrema salsugineum Thhalv10018037m.g PTHR22847:SF480 - PROTEIN TOPLESS-RELATED scaffold_9 - View
Eutrema salsugineum Thhalv10006622m.g PTHR22847:SF480 - PROTEIN TOPLESS-RELATED scaffold_5 + View
Fragaria x ananassa FAN02G0740 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED Fvb6-4 + View
Fragaria x ananassa FAN05G5346 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED Fvb6-3 - View
Fragaria x ananassa FAN14G5551 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED Fvb6-1 - View
Fragaria x ananassa FAN20G0700 PTHR22847//PTHR22847:SF446 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Fvb2-3 - View
Fragaria x ananassa FAN09G3819 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Fvb6-2 - View
Fragaria vesca FvH4_2g28620 PTHR22847//PTHR22847:SF446 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Fvb2 - View
Fragaria vesca FvH4_6g29170 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED Fvb6 + View
Gossypium hirsutum Gohir.D05G122800 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED D05 + View
Gossypium hirsutum Gohir.A06G183900 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED A06 + View
Gossypium hirsutum Gohir.A05G121900 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED A05 + View
Gossypium hirsutum Gohir.D06G190900 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED D06 + View
Glycine max Glyma.13G367300 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Gm13 - View
Glycine max Glyma.04G065000 PTHR22847:SF499 - TOPLESS-RELATED PROTEIN 4 Gm04 - View
Glycine max Glyma.08G214600 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Gm08 - View
Glycine max Glyma.07G028000 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Gm07 + View
Glycine max Glyma.15G006100 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Gm15 + View
Gossypium raimondii Gorai.010G224000 Chr10 + View
Gossypium raimondii Gorai.009G126400 Chr09 + View
Helianthus annuus HanXRQChr04g0098071 Putative LIS1 homology motif; CTLH, C-terminal LisH motif; WD40/YVTN repeat-like-containing domain; Topless family HanXRQChr04 - View
Helianthus annuus HanXRQChr16g0500261 Putative CTLH, C-terminal LisH motif; Quinoprotein alcohol dehydrogenase-like superfamily; WD40/YVTN repeat-like-containing domain; Topless family HanXRQChr16 + View
Lupinus albus Lalb_Chr14g0373891 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED Lalb_Chr14 - View
Lupinus albus Lalb_Chr22g0350781 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Lalb_Chr22 + View
Lotus japonicus Lj3g0018796 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED chr3 - View
Lotus japonicus Lj3g0002424 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED chr3 - View
Lonicera japonica Lj9A497G69 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_5_8840 Lsat_1_v8_lg_5 - View
Magnolia biondii MBI15_g41674_MAGBIO AED:0.19 Chr15 + View
Malus domestica MD17G1217100 Transducin family protein / WD-40 repeat family protein Chr17 - View
Malus domestica MD15G1129100 TOPLESS-related 1 Chr15 - View
Manihot esculenta Manes.04G108600 Chromosome04 + View
Manihot esculenta Manes.03G012550 Chromosome03 + View
Manihot esculenta Manes.11G061200 Chromosome11 - View
Manihot esculenta Manes.16G124700 Chromosome16 - View
Medicago truncatula Medtr4g009840 topless-like protein chr4 + View
Medicago truncatula Medtr2g104140 topless-like protein chr2 - View
Nelumbo nucifera Nn2g12191 chr2 - View
Nicotiana tabacum Nitab4.5_0002322g0070 Topless family, WD40 repeat, WD40 repeat, conserved site, LisH dimerisation motif, WD40-repeat-containing domain, WD40/YVTN repeat-like-containing domain, CTLH, C-terminal LisH motif Nitab4.5_0002322 - View
Petunia axillaris Peaxi162Scf00332g00112 TOPLESS-related 1 Peaxi162Scf00332 - View
Punica granatum PGR044G1840 NC_045134.1 + View
Punica granatum PGR102G0035 NC_045129.1 + View
Punica granatum PGR031G0793 NC_045127.1 + View
Prunus persica Prupe.1G484400 Pp01 - View
Prunus persica Prupe.3G093100 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Pp03 - View
Pisum sativum Psat7g257840 WD domain + G-beta repeat chr7LG7 - View
Populus trichocarpa Potri.003G030000 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Chr03 + View
Populus trichocarpa Potri.018G023800 KOG0293//KOG0318 - WD40 repeat-containing protein // WD40 repeat stress protein/actin interacting protein Chr18 - View
Populus trichocarpa Potri.006G257900 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Chr06 - View
Phaseolus vulgaris Phvul.010G157700 Chr10 - View
Phaseolus vulgaris Phvul.005G180100 PTHR22847:SF480 - PROTEIN TOPLESS-RELATED Chr05 + View
Phaseolus vulgaris Phvul.001G049800 PTHR22847:SF499 - TOPLESS-RELATED PROTEIN 4 Chr01 - View
Quercus lobata QL02p020877 CM012294 - View
Quercus lobata QL05p032679 5 - View
Quercus lobata QL05p029744 5 + View
Rosa chinensis RcHm_v2.0_Chr6g0297391 RcHm_v2.0_Chr6 - View
Rosa chinensis RcHm_v2.0_Chr2g0134371 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim12G0189200 chr12 + View
Striga asiatica SGA_v2.0_scaffold37G14746 scaffold37 + View
Salvia bowleyana SalBow6G3824 GWHASIU00000002 - View
Salix brachista Sabra03G0016500 GWHAAZH00000003 + View
Salix brachista Sabra18G0026500 GWHAAZH00000018 - View
Salix brachista Sabra06G0201700 GWHAAZH00000006 - View
Sechium edule Sed0021421 LG05 + View
Sechium edule Sed0024045 LG06 + View
Solanum lycopersicum Solyc03g117360.4 TOPLESS1 SL4.0ch03 + View
Schrenkiella parvula Sp5g35310 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED ch5-7 + View
Schrenkiella parvula Sp1g14040 PTHR22847//PTHR22847:SF480 - WD40 REPEAT PROTEIN // PROTEIN TOPLESS-RELATED ch1-1 - View
Schrenkiella parvula Sp4g04630 K14558 - periodic tryptophan protein 2 (PWP2, UTP1) ch4-2 + View
Solanum pennellii Sopen03g036250 Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top help of the embryo during the transition stage of embryogenesis. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background. | TOPLESS (TPL) | FUNCTIONS IN: protein binding, transcription repressor activity, protein homodimerization activity | INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, primary shoot apical meristem specification, jasmonic acid mediated signaling pathway | LOCATED IN: cytosol, nucleus | EXPRESSED IN: 27 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , CTLH, C-terminal LisH motif , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , LisH dimerisation motif , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: TOPLESS-related 1 Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400014137 Protein TOPLESS ST4.03ch03 + View
Selenicereus undatus Hund00495 Scaffold_33678 + View
Selenicereus undatus Hund06544 Scaffold_33676 + View
Trochodendron aralioides TAR383G0842 group10 + View
Trochodendron aralioides TAR625G0987 group4 + View
Theobroma cacao Thecc.09G020900 TOPLESS-related 1 Chromosome_9 - View
Theobroma cacao Thecc.06G033200 TOPLESS-related 1 Chromosome_6 - View
Tarenaya hassleriana THA.LOC104813577 protein TOPLESS-like NW_010965373.1 - View
Tarenaya hassleriana THA.LOC104808364 protein TOPLESS NW_010964598.1 + View
Tarenaya hassleriana THA.LOC104803652 protein TOPLESS isoform X1 NW_010971389.1 + View
Tarenaya hassleriana THA.LOC104812463 protein TOPLESS-like NW_010965372.1 + View
Trifolium pratense TPR.G37293 Tp57577_TGAC_v2_LG7 + View
Trifolium pratense TPR.G38602 Tp57577_TGAC_v2_LG4 - View
Tripterygium wilfordii TWI18G0724 NC_052241.1 - View
Tripterygium wilfordii TWI12G1277 NC_052243.1 + View
Vigna mungo VMungo0331G0637 CM024078.1 + View
Vigna mungo VMungo1309G1017 CM024072.1 + View
Vitis vinifera GSVIVG01035940001 chr4 - View
Vitis vinifera GSVIVG01017487001 chr9 - View