Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G4280 LG-10 - View
Acer truncatum Atru.chr13.721 chr13 - View
Actinidia chinensis Actinidia12938 Lachesis_group2 - View
Actinidia chinensis Actinidia00429 Lachesis_group12 - View
Arabidopsis lyrata AL1G57220 scaffold_1 + View
Amaranthus hybridus Ah.01g017850 Transcription factor bHLH95 (Basic helix-loop-helix protein 95) (AtbHLH95) (bHLH 95) (Protein RETARDED GROWTH OF EMBRYO 1) (Protein ZHOUPI) (Transcription factor EN 21) (bHLH transcription factor bHLH095) AmaHy_arrow1_Scaffold_1 - View
Aquilegia oxysepala Aqoxy5G01197 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.U584NJ PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.20 - View
Arabidopsis thaliana AT1G49770 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a member of the basic helix loop helix family of transcription factors. Loss of RGE1 function causes shriveled seeds that contain small embryos. The cuticle in the embryos does not develop normally%2C possible due to the adeherence of the endosperm to the developing embryo. RGE1 is expressed in the endosperm surrounding region which directly surrounds the developing embryo%2C however it exerts its effect non autonomously- in the developing embryo. Mutant seedlings are extremely sensitive to dessication due to the abnormal cuticle. RETARDED GROWTH OF EMBRYO 1 (RGE1)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: embryo development%2C regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: endosperm%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G22760.1)%3B Has 1071 Blast hits to 1071 proteins in 72 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 65%3B Fungi - 10%3B Plants - 987%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink). Chr1 + View
Brassica napus C06p04340 C06 - View
Camellia sinensis var. sinensis CSS0020055 PREDICTED: transcription factor bHLH95 [Vitis vinifera] Chr3 + View
Capsicum annuum CAN.G1231.38 PGAv.1.6.scaffold1231 + View
Capsicum annuum CAN.G1041.44 PGAv.1.6.scaffold1041 - View
Cannabis sativa CANSAT25G0518 NC_044370.1 - View
Cicer arietinum L. Ca_18705_v3 Ca_LG6_v3 - View
Corylus avellana Haze_10098 Similar to BHLH95: Transcription factor bHLH95 (Arabidopsis thaliana OX%3D3702) 9 - View
Coffea canephora Cc02_g18940 Putative Transcription factor bHLH95 chr2 - View
Citrus clementina Ciclev10030106m.g scaffold_8 + View
Citrus clementina Ciclev10003973m.g scaffold_5 + View
Carpinus fangiana Cfa004537 Cfa02 - View
Cardamine hirsuta CARHR039820 Transcription factor bHLH95 Chr1 + View
Carya illinoinensis CiPaw.06G171700 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED Chr06 + View
Cucumis melo MELO3C018451.2 transcription factor bHLH95-like chr01 + View
Corchorus olitorius COL.COLO4_32636 hypothetical protein AWUE01021139.1 + View
Carica papaya Cpa.g.sc21.177 supercontig_21 + View
Chenopodium quinoa AUR62010242 BHLH95: Transcription factor bHLH95 C_Quinoa_Scaffold_1257 - View
Chenopodium quinoa AUR62013224 BHLH95: Transcription factor bHLH95 C_Quinoa_Scaffold_1040 - View
Capsella rubella Carub.0001s3897 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED scaffold_1 + View
Cucumis sativus L. CsaV3_7G008580 transcription factor bHLH95-like chr7 - View
Davidia involucrata Dinv15730 GWHABJS00000005 - View
Durio zibethinus Duzib132G1208 NW_019167915.1 - View
Erigeron canadensis ECA234G2113 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA240G1347 Conyza_canadensis_scaffold:5 - View
Erythranthe guttata Migut.B00361 scaffold_2 - View
Erythranthe guttata Migut.N01183 scaffold_14 + View
Eutrema salsugineum Thhalv10012185m.g PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED scaffold_7 - View
Fragaria x ananassa FAN15G1137 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED Fvb2-4 - View
Fragaria x ananassa FAN20G0617 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED Fvb2-3 - View
Fragaria x ananassa FAN20G1742 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED Fvb2-3 - View
Fragaria x ananassa FAN24G2463 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED Fvb2-2 - View
Fragaria x ananassa FAN15G0327 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED Fvb2-4 + View
Fragaria vesca FvH4_2g05810 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED Fvb2 + View
Gossypium hirsutum Gohir.A13G041500 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED A13 - View
Gossypium hirsutum Gohir.A03G188350 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED A03 + View
Gossypium hirsutum Gohir.D13G040200 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED D13 - View
Gossypium hirsutum Gohir.D02G209050 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED D02 + View
Glycine max Glyma.02G103100 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED Gm02 - View
Gossypium raimondii Gorai.013G045100 Chr13 - View
Hydrangea macrophylla Hma1.2p1_0370F.1_g137650 Hma1.2p1_0370F.1 + View
Lotus japonicus Lj4g0009952 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED chr4 + View
Lonicera japonica Lj9C355T10 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_9_110961 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED Lsat_1_v8_lg_9 + View
Malus domestica MD05G1083300 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr05 - View
Malus domestica MD15G1079900 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr15 + View
Manihot esculenta Manes.05G175600 Chromosome05 - View
Manihot esculenta Manes.18G039500 Chromosome18 - View
Medicago truncatula Medtr4g085660 helix loop helix DNA-binding domain protein chr4 + View
Nelumbo nucifera Nn1g04801 chr1 + View
Nicotiana tabacum Nitab4.5_0001428g0060 Myc-type, basic helix-loop-helix (bHLH) domain Nitab4.5_0001428 + View
Olea europaea Oeu001777.1 chr3 + View
Olea europaea Oeu013724.1 chr15 - View
Olea europaea Oeu007296.1 chr3 + View
Petunia axillaris Peaxi162Scf00152g00131 Basic helix-loop-helix DNA-binding superfamily protein, putative Peaxi162Scf00152 - View
Petunia axillaris Peaxi162Scf00016g02026 Basic helix-loop-helix DNA-binding superfamily protein, putative Peaxi162Scf00016 - View
Punica granatum PGR042G3868 NC_045130.1 - View
Prunus persica Prupe.8G127700 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED Pp08 - View
Prunus persica Prupe.1G432900 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED Pp01 + View
Pisum sativum Psat7g126040 Helix-loop-helix DNA-binding domain chr7LG7 + View
Papaver somniferum PSO210G4688 NC_039359.1 - View
Papaver somniferum PSO170G5216 NC_039360.1 - View
Populus trichocarpa Potri.014G025900 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED Chr14 + View
Phaseolus vulgaris Phvul.003G048000 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED Chr03 + View
Quercus lobata QL11p034987 11 + View
Quercus lobata QL02p004396 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr6g0257881 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim11G0164600 chr11 + View
Striga asiatica SGA_v2.0_scaffold393G50697 scaffold393 - View
Salvia bowleyana SalBow3G0638 GWHASIU00000006 - View
Salvia bowleyana SalBow6G6778 GWHASIU00000002 - View
Salix brachista Sabra09G0076200 GWHAAZH00000009 + View
Salix brachista Sabra14G0017800 GWHAAZH00000014 + View
Simmondsia chinensis Sc08g0001710 GWHAASQ00000008 + View
Sechium edule Sed0005157 LG05 + View
Solanum lycopersicum Solyc01g107950.2 bHLH transcription factor 008 SL4.0ch01 + View
Schrenkiella parvula Sp1g36660 PTHR11514//PTHR11514:SF57 - MYC // SUBFAMILY NOT NAMED ch1-2 + View
Solanum pennellii Sopen01g050130 Encodes a member of the basic helix loop helix family of transcription factors. Loss of RGE1 function causes shriveled seeds that contain small embryos. The cuticle in the embryos does not develop normally, possible due to the adeherence of the endosperm to the developing embryo. RGE1 is expressed in the endosperm surrounding region which directly surrounds the developing embryo, however it exerts its effect non autonomously- in the developing embryo. Mutant seedlings are extremely sensitive to dessication due to the abnormal cuticle. | RETARDED GROWTH OF EMBRYO 1 (RGE1) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: embryo development, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: endosperm | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400025780 Transcription factor bHLH95 ST4.03ch01 + View
Selenicereus undatus Hund00113 Scaffold_33678 - View
Trochodendron aralioides TAR381G0350 group11 - View
Trochodendron aralioides TAR376G0856 group14 + View
Theobroma cacao Thecc.02G102900 Chromosome_2 - View
Theobroma cacao Thecc.08G003900 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_8 + View
Trifolium pratense TPR.G12728 Tp57577_TGAC_v2_LG2 + View
Tripterygium wilfordii TWI79G0711 NC_052238.1 + View
Tripterygium wilfordii TWI36G1467 NC_052237.1 + View
Tripterygium wilfordii TWI56G0629 NC_052242.1 + View
Vaccinium macrocarpon vmacro02036 Similar to BHLH95: Transcription factor bHLH95 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G1556 CM024069.1 - View
Vitis vinifera GSVIVG01009469001 chr18 + View
Vitis vinifera GSVIVG01031718001 chr3 + View