Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr9.2153 chr9 - View
Actinidia chinensis Actinidia14580 Lachesis_group6 + View
Actinidia chinensis Actinidia28364 Lachesis_group23 + View
Coffea canephora Cc08_g15010 DNA repair helicase XPB1 chr8 + View
Citrus clementina Ciclev10019088m.g scaffold_3 - View
Carya illinoinensis CiPaw.12G091100 K10843 - DNA excision repair protein ERCC-3 (ERCC3, XPB) Chr12 - View
Citrullus lanatus ClCG01G002520 TFIIH basal transcription factor complex helicase XPB subunit-like CG_Chr01 - View
Cucumis melo MELO3C005694.2 DNA repair helicase XPB1 chr09 + View
Cucumis sativus L. CsaV3_5G002620 DNA repair helicase chr5 - View
Davidia involucrata Dinv37619 GWHABJS00000017 - View
Davidia involucrata Dinv38921 GWHABJS00000003 - View
Durio zibethinus Duzib084G0223 NW_019167827.1 + View
Durio zibethinus Duzib205G0291 NW_019168381.1 + View
Erigeron canadensis ECA246G2088 Conyza_canadensis_scaffold:8 - View
Erythranthe guttata Migut.E01191 scaffold_5 + View
Fragaria x ananassa FAN13G0786 K10843 - DNA excision repair protein ERCC-3 (ERCC3, XPB) Fvb5-2 + View
Fragaria x ananassa FAN04G2979 K10843 - DNA excision repair protein ERCC-3 (ERCC3, XPB) Fvb5-4 + View
Glycine max Glyma.18G257500 PF16203 - ERCC3/RAD25/XPB C-terminal helicase (ERCC3_RAD25_C) Gm18 + View
Lonicera japonica Lj2C182G1 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_3_6121 Lsat_1_v8_lg_3 + View
Malus domestica MD06G1087900 homolog of xeroderma pigmentosum complementation group B 1 Chr06 + View
Petunia axillaris Peaxi162Scf00074g02032 TFIIH basal transcription factor complex helicase XPB subunit Peaxi162Scf00074 - View
Prunus persica Prupe.5G104000 K10843 - DNA excision repair protein ERCC-3 (ERCC3, XPB) Pp05 + View
Populus trichocarpa Potri.001G101300 K10843 - DNA excision repair protein ERCC-3 (ERCC3, XPB) Chr01 - View
Quercus lobata QL12p032410 12 - View
Rosa chinensis RcHm_v2.0_Chr7g0197061 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim02G0234100 chr02 + View
Salix brachista Sabra01G0076300 GWHAAZH00000001 - View
Solanum lycopersicum Solyc08g081340.4 DNA repair helicase (AHRD V3.3 *** A0A2U1Q9X8_ARTAN) SL4.0ch08 + View
Solanum pennellii Sopen08g029660 Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies. | homolog of xeroderma pigmentosum complementation group B 1 (XPB1) | FUNCTIONS IN: in 7 functions | INVOLVED IN: response to UV, response to toxin | LOCATED IN: nucleus, cytoplasm | EXPRESSED IN: whole plant, male gametophyte, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth | CONTAINS InterPro DOMAIN/s: Restriction endonuclease, type I, R subunit/Type III, Res subunit , DEAD-like helicase, N-terminal , Xeroderma pigmentosum group B protein (XP-B) , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: homolog of Xeroderma pigmentosum complementation group B 2 Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400012332 Rad25/xp-B DNA repair helicase ST4.03ch08 + View
Trochodendron aralioides TAR636G0201 group1 - View
Vigna mungo VMungo0251G2080 CM024069.1 + View
Vitis vinifera GSVIVG01019392001 chr2 + View