Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G10720 LG-8 + View
Acer truncatum Atru.chr4.1713 chr4 - View
Actinidia chinensis Actinidia35869 Lachesis_group8 + View
Actinidia chinensis Actinidia37007 Lachesis_group0 + View
Arabidopsis lyrata AL3G39120 scaffold_3 + View
Avicennia marina MSTRG.9819 ScioBoG_12795_HRSCAF_12848 - View
Arabidopsis thaliana AT3G24140 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. It fulfills its role through recruitment of the Arabidopsis Retinoblastoma homologue%2C RETINOBLASTOMA-RELATED (RBR). Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell. Its transcript levels change after inducing MUTE expression in a mute background. FAMA (FMA)%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT1G72210.1)%3B Has 1771 Blast hits to 1747 proteins in 153 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 13%3B Fungi - 80%3B Plants - 1654%3B Viruses - 0%3B Other Eukaryotes - 24 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC06g35615 ChrC06 + View
Brassica carinata BcaB04g20403 ChrB04 - View
Brassica carinata BcaB06g26583 ChrB06 + View
Brassica carinata BcaB03g14603 ChrB03 + View
Brassica carinata BcaC01g03349 ChrC01 + View
Brassica napus A01p31080 A01 - View
Brassica napus A07p08300 A07 - View
Brassica napus C07p12940 C07 - View
Brassica napus C03p53410 C03 - View
Brassica napus A03p43450 A03 - View
Brassica oleracea BolC3t17601H C3 - View
Brassica oleracea BolC7t41778H C7 - View
Brassica rapa BraA07t28613Z A07 - View
Brassica rapa BraA03t13483Z A03 - View
Beta vulgaris EL10Ac3g07488 PTHR11514//PTHR11514:SF61 - MYC // TRANSCRIPTION FACTOR FAMA Chr3_EL10_PGA_scaffold7 - View
Camellia sinensis var. sinensis CSS0005073 PREDICTED: transcription factor FAMA isoform X2 [Populus euphratica] Chr9 + View
Capsicum annuum CAN.G500.9 PGAv.1.6.scaffold500 + View
Cannabis sativa CANSAT78G0913 NC_044376.1 - View
Corylus avellana Haze_11603 Similar to FAMA: Transcription factor FAMA (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc03_g07740 Transcription factor FAMA chr3 + View
Citrus clementina Ciclev10005031m.g scaffold_9 + View
Cardamine hirsuta CARHR100060 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr3 + View
Carya illinoinensis CiPaw.02G066700 PTHR11514//PTHR11514:SF61 - MYC // TRANSCRIPTION FACTOR FAMA Chr02 - View
Citrullus lanatus ClCG05G003350 basic helix-loop-helix (bHLH) DNA-binding superfamily protein LENGTH=414 CG_Chr05 - View
Cucumis melo MELO3C006315.2 transcription factor FAMA chr06 - View
Carica papaya Cpa.g.sc59.132 supercontig_59 - View
Chenopodium quinoa AUR62020815 FAMA: Transcription factor FAMA C_Quinoa_Scaffold_4257 + View
Capsella rubella Carub.0003s2436 PTHR11514//PTHR11514:SF61 - MYC // TRANSCRIPTION FACTOR FAMA scaffold_3 + View
Daucus carota DCAR_026607 hypothetical protein DCARv2_Chr8 - View
Daucus carota DCAR_024478 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv38242 GWHABJS00000016 + View
Davidia involucrata Dinv29589 GWHABJS00000014 + View
Durio zibethinus Duzib151G0523 NW_019167904.1 - View
Durio zibethinus Duzib151G0177 NW_019167904.1 - View
Eucalyptus grandis Eucgr.H02788 Chr08 - View
Erythranthe guttata Migut.G00674 scaffold_7 + View
Eutrema salsugineum Thhalv10002558m.g scaffold_4 - View
Gossypium hirsutum Gohir.D10G142500 PTHR11514//PTHR11514:SF61 - MYC // TRANSCRIPTION FACTOR FAMA D10 - View
Gossypium hirsutum Gohir.A10G123300 PTHR11514//PTHR11514:SF61 - MYC // TRANSCRIPTION FACTOR FAMA A10 + View
Gossypium raimondii Gorai.011G159100 Chr11 - View
Hydrangea macrophylla Hma1.2p1_0187F.1_g082060 Hma1.2p1_0187F.1 + View
Lonicera japonica Lj6A559T13 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_2_44720 Lsat_1_v8_lg_2 - View
Malus domestica MD04G1006400 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr04 + View
Manihot esculenta Manes.03G148500 Chromosome03 - View
Manihot esculenta Manes.15G052900 Chromosome15 + View
Nelumbo nucifera Nn3g19966 chr3 + View
Nicotiana tabacum Nitab4.5_0003502g0010 Myc-type, basic helix-loop-helix (bHLH) domain Nitab4.5_0003502 + View
Olea europaea Oeu016730.1 chr4 - View
Olea europaea Oeu018222.2 chr22 - View
Petunia axillaris Peaxi162Scf00047g00063 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00047 + View
Petunia axillaris Peaxi162Scf00423g00219 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Peaxi162Scf00423 + View
Punica granatum PGR083G2370 NC_045133.1 - View
Prunus persica Prupe.1G006600 Pp01 + View
Papaver somniferum PSO017G3384 NC_039362.1 - View
Papaver somniferum PSO063G5613 NC_039364.1 - View
Populus trichocarpa Potri.017G054500 PTHR11514//PTHR11514:SF61 - MYC // TRANSCRIPTION FACTOR FAMA Chr17 + View
Populus trichocarpa Potri.001G314400 PTHR11514//PTHR11514:SF61 - MYC // TRANSCRIPTION FACTOR FAMA Chr01 + View
Quercus lobata QL06p024336 6 + View
Rhododendron simsii Rhsim09G0055600 chr09 + View
Striga asiatica SGA_v2.0_scaffold57G20124 scaffold57 - View
Salvia bowleyana SalBow3G0529 GWHASIU00000006 - View
Salix brachista Sabra17G0046300 GWHAAZH00000017 + View
Salix brachista Sabra16G0198900 GWHAAZH00000016 + View
Sechium edule Sed0018555 LG02 + View
Solanum lycopersicum Solyc05g053660.3 Basic helix-loop-helix (BHLH) DNA-binding superfamily protein (AHRD V3.3 *** A0A2U1LW68_ARTAN) SL4.0ch05 + View
Solanum lycopersicum Solyc09g091760.3 bHLH transcription factor 151 SL4.0ch09 + View
Solanum pennellii Sopen05g032160 Encodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell. | FAMA (FMA) | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch05 + View
Solanum tuberosum PGSC0003DMG400029634 Transcription factor FAMA ST4.03ch09 + View
Solanum tuberosum PGSC0003DMG400015760 Transcription factor FAMA ST4.03ch05 + View
Trochodendron aralioides TAR636G1497 group1 - View
Trochodendron aralioides TAR365G0065 group16 - View
Theobroma cacao Thecc.04G205100 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_4 - View
Tarenaya hassleriana THA.LOC104804813 transcription factor FAMA-like NW_010972002.1 - View
Tarenaya hassleriana THA.LOC104808716 transcription factor FAMA NW_010964923.1 - View
Tripterygium wilfordii TWI09G1147 NC_052245.1 - View
Tripterygium wilfordii TWI73G1139 NC_052232.1 + View
Vaccinium macrocarpon vmacro00482 Similar to FAMA: Transcription factor FAMA (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01021074001 chr5 + View