Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CiPaw.13G066700 5.4.99.44 - Mitochondrial tRNA pseudouridine(27/28) synthase Chr13 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G6390 LG-5 + View
Acer truncatum Atru.chr1.2561 chr1 - View
Actinidia chinensis Actinidia23852 Lachesis_group9 - View
Actinidia chinensis Actinidia34484 Lachesis_group15 + View
Actinidia chinensis Actinidia23185 Lachesis_group20 + View
Arabidopsis lyrata AL4G25180 scaffold_4 - View
Avicennia marina MSTRG.17900 ScioBoG_19834_HRSCAF_19925 - View
Arabidopsis thaliana AT2G30320 Pseudouridine synthase family protein Pseudouridine synthase family protein%3B FUNCTIONS IN: pseudouridine synthase activity%3B INVOLVED IN: pseudouridine synthesis%2C RNA modification%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Pseudouridine synthase%2C catalytic domain (InterPro:IPR020103)%2C Pseudouridine synthase I%2C TruA%2C N-terminal (InterPro:IPR020094)%2C Pseudouridine synthase I%2C TruA%2C alpha/beta domain (InterPro:IPR020097)%2C Pseudouridine synthase I%2C TruA (InterPro:IPR001406)%3B BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT1G76120.1)%3B Has 2235 Blast hits to 2027 proteins in 681 species: Archae - 89%3B Bacteria - 873%3B Metazoa - 390%3B Fungi - 255%3B Plants - 163%3B Viruses - 0%3B Other Eukaryotes - 465 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR1127G103 AmTr_v1.0_scaffold00077 + View
Brassica carinata BcaC01g05985 ChrC01 - View
Brassica napus C03p19940 C03 - View
Brassica napus A03p16930 A03 - View
Brassica oleracea BolC3t14372H C3 - View
Beta vulgaris EL10Ac7g15868 PTHR11142//PTHR11142:SF9 - PSEUDOURIDYLATE SYNTHASE // TRNA PSEUDOURIDINE SYNTHASE Chr7_EL10_PGA_scaffold5 + View
Cicer arietinum L. Ca_05688_v3 Ca_LG2_v3 - View
Corylus avellana Haze_24438 Similar to At2g30320: Putative tRNA pseudouridine synthase (Arabidopsis thaliana OX%3D3702) 6 - View
Coffea canephora Cc01_g15060 Putative tRNA pseudouridine synthase chr1 - View
Citrus clementina Ciclev10003830m.g scaffold_5 - View
Cardamine hirsuta CARHR123640 Pseudouridine synthase family protein Chr4 - View
Citrullus lanatus ClCG03G000200 tRNA pseudouridine synthase CG_Chr03 - View
Cucumis melo MELO3C020498.2 tRNA pseudouridine synthase chr12 - View
Corchorus olitorius COL.COLO4_11182 Pseudouridine synthase I%2C TruA AWUE01014647.1 - View
Chenopodium quinoa AUR62009718 At2g30320: Putative tRNA pseudouridine synthase C_Quinoa_Scaffold_2493 - View
Chenopodium quinoa AUR62036228 At2g30320: Putative tRNA pseudouridine synthase C_Quinoa_Scaffold_2528 + View
Capsella rubella Carub.0004s1147 4.2.1.70//5.4.99.12//5.4.99.44 - Pseudouridylate synthase / Uracil hydrolyase // tRNA pseudouridine(38-40) synthase / tRNA pseudouridylate synthase I // Mitochondrial tRNA pseudouridine(27/28) synthase scaffold_4 - View
Cucumis sativus L. CsaV3_1G036700 tRNA pseudouridine synthase chr1 + View
Davidia involucrata Dinv28707 GWHABJS00000010 - View
Durio zibethinus Duzib168G0394 NW_019168159.1 - View
Erigeron canadensis ECA247G0586 Conyza_canadensis_scaffold:7 - View
Erythranthe guttata Migut.N00748 scaffold_14 + View
Eutrema salsugineum Thhalv10016529m.g PTHR11142:SF9 - TRNA PSEUDOURIDINE SYNTHASE scaffold_10 + View
Fragaria x ananassa FAN16G1196 PTHR11142//PTHR11142:SF9 - PSEUDOURIDYLATE SYNTHASE // TRNA PSEUDOURIDINE SYNTHASE Fvb3-3 - View
Fragaria x ananassa FAN21G3656 PTHR11142//PTHR11142:SF9 - PSEUDOURIDYLATE SYNTHASE // TRNA PSEUDOURIDINE SYNTHASE Fvb3-2 - View
Fragaria x ananassa FAN11G2758 PTHR11142//PTHR11142:SF9 - PSEUDOURIDYLATE SYNTHASE // TRNA PSEUDOURIDINE SYNTHASE Fvb3-4 + View
Fragaria x ananassa FAN25G2364 PTHR11142:SF9 - TRNA PSEUDOURIDINE SYNTHASE Fvb3-1 + View
Fragaria vesca FvH4_3g40070 PTHR11142:SF9 - TRNA PSEUDOURIDINE SYNTHASE Fvb3 - View
Gossypium hirsutum Gohir.A03G024400 4.2.1.70//5.4.99.12 - Pseudouridylate synthase / Uracil hydrolyase // tRNA pseudouridine(38-40) synthase / tRNA pseudouridylate synthase I A03 + View
Gossypium hirsutum Gohir.D03G144100 PTHR11142:SF9 - TRNA PSEUDOURIDINE SYNTHASE D03 - View
Glycine max Glyma.02G233500 PTHR11142:SF9 - TRNA PSEUDOURIDINE SYNTHASE Gm02 - View
Gossypium raimondii Gorai.003G151400 Chr03 - View
Lupinus albus Lalb_Chr17g0345491 4.2.1.70//5.4.99.12 - Pseudouridylate synthase / Uracil hydrolyase // tRNA pseudouridine(38-40) synthase / tRNA pseudouridylate synthase I Lalb_Chr17 - View
Lupinus albus Lalb_Chr10g0103671 5.4.99.44 - Mitochondrial tRNA pseudouridine(27/28) synthase Lalb_Chr10 - View
Lotus japonicus LjContig00141g0002443 4.2.1.70 - Pseudouridylate synthase / Uracil hydrolyase Contig00141 + View
Lonicera japonica Lj2A1097G33 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_9_14440 4.2.1.70//5.4.99.12 - Pseudouridylate synthase / Uracil hydrolyase // tRNA pseudouridine(38-40) synthase / tRNA pseudouridylate synthase I Lsat_1_v8_lg_9 + View
Malus domestica MD11G1060800 Pseudouridine synthase family protein Chr11 - View
Manihot esculenta Manes.18G138800 Chromosome18 - View
Medicago truncatula Medtr5g074620 tRNA pseudouridine synthase chr5 - View
Nelumbo nucifera Nn2g11083 chr2 - View
Prunus persica Prupe.6G045100 Pp06 + View
Populus trichocarpa Potri.013G154200 5.4.99.44 - Mitochondrial tRNA pseudouridine(27/28) synthase Chr13 - View
Quercus lobata QL01p025515 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0072261 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0062400 chr13 + View
Rhododendron simsii Rhsim01G0241600 chr01 - View
Salvia bowleyana SalBow2G3538 GWHASIU00000007 - View
Salix brachista Sabra13G0124000 GWHAAZH00000013 - View
Simmondsia chinensis Sc12g0000200 GWHAASQ00000012 + View
Sechium edule Sed0023817 LG01 - View
Schrenkiella parvula Sp4g12880 5.4.99.44 - Mitochondrial tRNA pseudouridine(27/28) synthase ch4-6 - View
Theobroma cacao Thecc.09G360700 Pseudouridine synthase family protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104800779 putative tRNA pseudouridine synthase NW_010969548.1 - View
Tripterygium wilfordii TWI31G0474 NC_052233.1 + View
Vaccinium macrocarpon vmacro02902 Similar to At2g30320: Putative tRNA pseudouridine synthase (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro14626 Similar to At2g30320: Putative tRNA pseudouridine synthase (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0647G1827 CM024073.1 - View
Vitis vinifera GSVIVG01024604001 chr6 - View