Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CiPaw.01G171600 | PTHR22595//PTHR22595:SF61 - CHITINASE-RELATED // SUBFAMILY NOT NAMED | Chr01 | + | View |
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG1G25310 | LG-1 | - | View | |
Acer truncatum | Atru.chr4.1369 | chr4 | - | View | |
Actinidia chinensis | Actinidia27109 | Lachesis_group8 | - | View | |
Amaranthus hybridus | Ah.13g073580 | Acidic endochitinase SP2 (EC 3.2.1.14) | AmaHy_arrow1_Scaffold_13 | + | View |
Amborella trichopoda | ATR0743G031 | AmTr_v1.0_scaffold00066 | - | View | |
Brassica carinata | BcaB06g29329 | ChrB06 | - | View | |
Brassica rapa | BraA04t18748Z | A04 | - | View | |
Cannabis sativa | CANSAT56G4051 | NC_044371.1 | - | View | |
Corylus avellana | Haze_01376 | Similar to EP3: Endochitinase EP3 (Arabidopsis thaliana OX%3D3702) | 1 | + | View |
Citrus clementina | Ciclev10021602m.g | scaffold_3 | - | View | |
Carpinus fangiana | Cfa015256 | Cfa06 | - | View | |
Cardamine hirsuta | CARHR138700 | chitinase, putative | Chr4 | - | View |
Carica papaya | Cpa.g.sc9.346 | supercontig_9 | - | View | |
Chenopodium quinoa | AUR62002378 | Protein of unknown function | C_Quinoa_Scaffold_4480 | + | View |
Chenopodium quinoa | AUR62023809 | SP2: Acidic endochitinase SP2 | C_Quinoa_Scaffold_2187 | + | View |
Capsella rubella | Carub.0004s2606 | 3.2.1.14 - Chitinase / Poly-beta-glucosaminidase | scaffold_4 | - | View |
Davidia involucrata | Dinv07061 | GWHABJS00000016 | + | View | |
Davidia involucrata | Dinv33191 | GWHABJS00000014 | - | View | |
Durio zibethinus | Duzib268G0301 | NW_019168270.1 | + | View | |
Durio zibethinus | Duzib151G0286 | NW_019167904.1 | + | View | |
Durio zibethinus | Duzib212G0292 | NW_019168026.1 | + | View | |
Eucalyptus grandis | Eucgr.A00021 | Chr01 | - | View | |
Eucalyptus grandis | Eucgr.H00320 | Chr08 | + | View | |
Fragaria x ananassa | FAN12G0863 | PTHR22595//PTHR22595:SF37 - CHITINASE-RELATED // CHITINASE-RELATED | Fvb4-3 | - | View |
Fragaria x ananassa | FAN12G3708 | PTHR22595//PTHR22595:SF61 - CHITINASE-RELATED // SUBFAMILY NOT NAMED | Fvb4-3 | - | View |
Fragaria vesca | FvH4_4g10600 | PTHR22595:SF37 - CHITINASE-RELATED | Fvb4 | + | View |
Gossypium hirsutum | Gohir.D10G124200 | PTHR22595//PTHR22595:SF37 - CHITINASE-RELATED // CHITINASE-RELATED | D10 | + | View |
Gossypium raimondii | Gorai.011G137200 | Chr11 | + | View | |
Hydrangea macrophylla | Hma1.2p1_0150F.1_g066610 | Hma1.2p1_0150F.1 | + | View | |
Lonicera japonica | Lj3P152T14 | GWHAAZE00000003 | + | View | |
Manihot esculenta | Manes.11G128200 | Chromosome11 | - | View | |
Manihot esculenta | Manes.04G044225 | Chromosome04 | + | View | |
Nelumbo nucifera | Nn1g09682 | chr1 | + | View | |
Papaver somniferum | PSO675G8087 | NC_039358.1 | + | View | |
Populus trichocarpa | Potri.013G125000 | PTHR22595//PTHR22595:SF61 - CHITINASE-RELATED // SUBFAMILY NOT NAMED | Chr13 | - | View |
Quercus lobata | QL10p053207 | 10 | - | View | |
Quercus lobata | QL10p055472 | 10 | + | View | |
Rhododendron simsii | Rhsim09G0011600 | chr09 | + | View | |
Salix brachista | Sabra13G0103400 | GWHAAZH00000013 | - | View | |
Simmondsia chinensis | Sc25g0002760 | GWHAASQ00000025 | - | View | |
Solanum lycopersicum | Solyc06g053380.3 | Chitinase (AHRD V3.3 *** A0A2U1LR12_ARTAN) | SL4.0ch06 | - | View |
Solanum pennellii | Sopen06g018430 | encodes an EP3 chitinase that is expressed during somatic embryogenesis in nursing cells surrounding the embryos but not in embryos themselves. The gene is also expressed in mature pollen and growing pollen tubes until they enter the receptive synergid, but not in endosperm and integuments as in carrot. Post-embryonically, expression is found in hydathodes, stipules, root epidermis and emerging root hairs. | homolog of carrot EP3-3 chitinase (EP3) | FUNCTIONS IN: chitinase activity | INVOLVED IN: somatic embryogenesis, plant-type hypersensitive response | LOCATED IN: cell wall | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Chitin-binding, type 1, conserved site , Glycoside hydrolase, family 19 , Chitin-binding, type 1 , Glycoside hydrolase, family 19, catalytic | BEST Arabidopsis thaliana protein match is: Chitinase family protein | Spenn-ch06 | - | View |
Solanum tuberosum | PGSC0003DMG400016302 | Class IV chitinase | ST4.03ch06 | - | View |
Trochodendron aralioides | TAR633G1958 | group2 | + | View | |
Trochodendron aralioides | TAR362G0434 | group17 | + | View | |
Theobroma cacao | Thecc.04G168600 | Carrot EP3-3 chitinase | Chromosome_4 | + | View |
Tarenaya hassleriana | THA.LOC104803952 | endochitinase CHI-like | NW_010960188.1 | - | View |
Tripterygium wilfordii | TWI63G0507 | NC_052240.1 | - | View | |
Vitis vinifera | GSVIVG01038108001 | chr5 | - | View |